mRNA_P-wetherbeei_contig694.3.4 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig694.3.4
Unique NamemRNA_P-wetherbeei_contig694.3.4
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A836CR86_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR86_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.800e-87
Identity = 137/231 (59.31%), Postives = 167/231 (72.29%), Query Frame = 3
Query:  198 WKGWSDADVDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAIST-EAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            W+G+  +  + F+  +WQ+KPLLIRQAF   S   +P +S +EL  L+CA+DVESRI+ G   P  G + W +  GPF+E  F     G   WTLLVNEVNRHVPE SDLLQRFAF+P+WR+DD+M+SYA RGG VG HVDSYDVFLLQ  G R+WSIE Q I+T E E  RLVP ID R+L+ F    +W L+PGDMLYLPPR  HHGVSLDD C T S+GFRAPSHR++
Sbjct:   70 WQGFEASRHEEFLAEFWQKKPLLIRQAF---SEFQSP-ISPDELAGLSCADDVESRIVTGGKTP--GNSDWAVRHGPFDEGTFEEEELGGSHWTLLVNEVNRHVPEVSDLLQRFAFVPNWRVDDVMISYAARGGSVGAHVDSYDVFLLQGTGQREWSIEAQPIATAEEEYSRLVPEIDARVLEDFTAARSWVLSPGDMLYLPPRWAHHGVSLDDACTTISIGFRAPSHRDL 294          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A6H5JEP9_9PHAE (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEP9_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 4.230e-87
Identity = 134/241 (55.60%), Postives = 169/241 (70.12%), Query Frame = 3
Query:  192 EEWKGWSDADVDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREVGCLMGPILG 914
            E W+G+S+ D D F+  +WQ+KPLLIRQA  G       +++K+EL  L+C  DVE+R++ G          W++  GPFEE  FS +  G+  WTLLVNEVNRHVPE SDLL +F F+PSWR+DD+MVSYAP+GG VGPHVD+YDVFLLQ AG R WSIE    S E E ERLV  ID+R+L  F++   W L PGD LYLPPR+ H+GVS D+EC+TYSVGFRAPS R++    G  +G
Sbjct:   63 EVWQGFSEEDHDRFLAEFWQKKPLLIRQAIKGFET----ILTKDELAGLSCCPDVEARVVTGGRYVDNAGKDWEVEHGPFEEKMFSNL--GETHWTLLVNEVNRHVPEVSDLLMKFQFIPSWRVDDVMVSYAPKGGSVGPHVDNYDVFLLQGAGKRLWSIEDSFTSGEEEEERLVKDIDLRVLTEFKKSEGWVLEPGDALYLPPRLAHYGVSQDEECMTYSVGFRAPSVRDLVSFFGEHVG 297          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A0G4ED40_VITBC (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ED40_VITBC)

HSP 1 Score: 264 bits (675), Expect = 5.190e-81
Identity = 130/221 (58.82%), Postives = 158/221 (71.49%), Query Frame = 3
Query:  225 DTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            D F++ YWQ++PLL+RQAFP   +    L+S EEL  LA  E+VESR++    A  G   RW   +GPF EA F++ F      TLLV E NRH+P  S  L  F F+PSWRIDDLM+SYAP+GGGVGPHVDSYDVFLLQ AG RQWSIE+  +S   E +RLVP   VR+++GF   H+WTL PGDMLYLPPRV H GVSLDDEC+TYS+GFRAP  +E+
Sbjct:   73 DEFLKQYWQKRPLLVRQAFPDFKS----LLSPEELAGLAMDEEVESRVVSHETAADGTR-RWTKRNGPFHEAFFTQEF-ANCNTTLLVQECNRHIPPLSSFLDFFRFIPSWRIDDLMISYAPKGGGVGPHVDSYDVFLLQGAGRRQWSIESGKLSLRNEEDRLVPDSPVRVVEGFTPSHSWTLAPGDMLYLPPRVVHDGVSLDDECMTYSIGFRAPRRQEI 287          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A2A8D074_9BACT (Cupin n=1 Tax=Longibacter salinarum TaxID=1850348 RepID=A0A2A8D074_9BACT)

HSP 1 Score: 244 bits (624), Expect = 2.670e-75
Identity = 124/225 (55.11%), Postives = 151/225 (67.11%), Query Frame = 3
Query:  213 DADVDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            D   +TF+  YWQ+KPLLIR A P   +   P     EL  LAC E VESR+I       GGE  W+L  GPF+E DF  +   K  WT+LV EV+R +PE +DLL  FAF+P WRIDD+MVSYAP+ G VG H+D+YDVFLLQ  GTR+W    + +  E     +VP +DVR+LK F+ D    L PGDMLYLPPRV HHGVSLDDEC+TYS+GFRAPSH E+
Sbjct:   10 DLSPETFLNEYWQKKPLLIRGALPTFESPLEP----GELAGLACEEGVESRLI----LEEGGEKPWELRFGPFDEEDFLSLPESK--WTVLVQEVDRLIPEVADLLDAFAFVPKWRIDDVMVSYAPKDGNVGAHIDNYDVFLLQGQGTRRWEWGEEPVQNE----EIVPDLDVRMLKDFEADREAVLEPGDMLYLPPRVAHHGVSLDDECMTYSIGFRAPSHEEL 220          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: UPI00035C4ACC (cupin domain-containing protein n=1 Tax=Kushneria aurantia TaxID=504092 RepID=UPI00035C4ACC)

HSP 1 Score: 236 bits (603), Expect = 4.730e-72
Identity = 121/231 (52.38%), Postives = 159/231 (68.83%), Query Frame = 3
Query:  228 TFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQ--EDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREVGCLMGPILG 914
            TF+R+YWQ+KPLLIR AFP   +   PL S +EL  LAC E+VE+R+++      G E RWQ+S GPF E  F+R+  G+  W+LLV  V+ +VPE ++LL+ F F+P WR+DD+MVS+AP GG VGPHVD+YDVFLLQ  G R+W +  + +S EA +   + GID+RIL  FQ   D  W L PGDMLYLPPR+ HHGVS  + C+T+S+GFRAPS  E+       LG
Sbjct:   16 TFLRDYWQKKPLLIRGAFPDFES---PL-SPDELAGLACEENVEARLVE----VEGPERRWQVSHGPFSETTFARL--GRRDWSLLVQAVDHYVPEVAELLEHFTFIPRWRLDDIMVSFAPPGGNVGPHVDNYDVFLLQAGGPRRWQLGGE-MSEEAPI---IDGIDLRILADFQVEADQQWRLEPGDMLYLPPRIAHHGVSESESCMTFSIGFRAPSMDEMITSFADYLG 232          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A1I1P4N4_9GAMM (50S ribosomal protein L16 3-hydroxylase n=1 Tax=Thiohalospira halophila DSM 15071 TaxID=1123397 RepID=A0A1I1P4N4_9GAMM)

HSP 1 Score: 234 bits (598), Expect = 2.120e-71
Identity = 124/238 (52.10%), Postives = 149/238 (62.61%), Query Frame = 3
Query:  174 AKAPTIEEWKGWSDADVDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            A+ P I E     D D  TF+R+YWQ++PLLIR A PG  +     VS EEL  LA  EDVESR+I+    PP     W L  GPF E  F+ +      WTLLV   NRHVPE +DLL+ F F+P WR+DD+MVSYAP GG VGPH D YDVFLLQ  G R+WSI       +     L+P I +RIL+ F  DH W L PGDMLYLPP +PHHG +L+  C T SVGFRAP H ++
Sbjct:    2 ARTPAIPETL-LGDLDAATFLRDYWQQRPLLIRGALPGFRSP----VSPEELAGLALQEDVESRLIRELDGPPW----WSLEHGPFPEDRFADL--PPTHWTLLVQGANRHVPELADLLESFRFIPDWRVDDVMVSYAPEGGSVGPHTDQYDVFLLQGQGRRRWSIGNAPCGDDD----LLPDIPLRILRDFDPDHVWVLEPGDMLYLPPGIPHHGEALEP-CQTLSVGFRAPGHADL 223          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A1V0DGQ7_9BACT (Cupin n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DGQ7_9BACT)

HSP 1 Score: 234 bits (596), Expect = 4.000e-71
Identity = 120/222 (54.05%), Postives = 154/222 (69.37%), Query Frame = 3
Query:  222 VDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            V+ F+  YWQ+KPLLIR A PG ++   PL S ++L  LAC E+V SR+    V   GG+  WQL  GPF   DF  +   +  W+LLV EV+R+VPE + LL+ F F+P+WRIDD+M+SYAP+ GGVGPHVD+YDVFLLQ  G R+W I      T  E E LVP +DVRIL  F+ D  W L PGD+LYLPPR+PH+G++ DD C+TYS+GFRAPS  E+
Sbjct:   14 VEQFLAEYWQKKPLLIRGALPGFTS---PL-SPQDLAGLACEEEVISRL----VLERGGDYPWQLHYGPFSPEDFEAL--PETHWSLLVQEVDRYVPEVAALLEHFRFVPNWRIDDVMISYAPKHGGVGPHVDNYDVFLLQGLGHRRWQIH----HTPVEEEHLVPDLDVRILADFEPDAEWVLAPGDLLYLPPRIPHNGIAEDD-CMTYSIGFRAPSTVEL 220          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A2T2S5M7_9BACT (Cupin domain-containing protein n=1 Tax=Bacteroidetes bacterium QH_10_64_37 TaxID=1919091 RepID=A0A2T2S5M7_9BACT)

HSP 1 Score: 233 bits (595), Expect = 6.150e-71
Identity = 122/235 (51.91%), Postives = 150/235 (63.83%), Query Frame = 3
Query:  183 PTIEEWKGWSDADVDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            PT        D    TF+  YWQ +PLL+R A P   +   PL S +EL  LAC + VESRII       GGE  W+L  GPF   DF  +   +  WTLLV EV+R +PE + LL  F FLP WR+DD+MVSYAPR G VGPHVD+YDVFLLQ AG R+W I T  +    E E +VP +DVRIL  F+ D  + + PGD+LYLPPRV HHGV+ DD C TYS+GFRAP H+++
Sbjct:    3 PTTPASTVLGDHSPATFLDTYWQTQPLLVRDALPDFRS---PL-SPQELAGLACEDGVESRII----LEEGGEYPWELRQGPFASEDF--LDLPETHWTLLVQEVDRLIPEVATLLDHFRFLPDWRLDDVMVSYAPRHGTVGPHVDNYDVFLLQGAGRRRWQIGTAPV----EDEEIVPDLDVRILADFEPDEEFVVGPGDLLYLPPRVAHHGVATDDACTTYSIGFRAPRHQDL 223          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: A0A258S3L6_9GAMM (JmjC domain-containing protein n=1 Tax=Gammaproteobacteria bacterium 28-57-27 TaxID=1970513 RepID=A0A258S3L6_9GAMM)

HSP 1 Score: 233 bits (594), Expect = 7.980e-71
Identity = 116/222 (52.25%), Postives = 150/222 (67.57%), Query Frame = 3
Query:  222 VDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAPSHREV 887
            V+ F+R+YWQ+KPLLIRQAFP  +   TP    EEL  LAC E + SR+    V   GG   W+L  GPF E DFS +      W++LV++V + +PE   +++ F F+P WRIDDLM+SYAP GG VG HVD YDVFLLQ  G R+W IE+QA   E      + G+D+RILK F  D TW L PGD+LYLPP VPHHG++L  EC+T+S+GFRAP+H ++
Sbjct:   13 VERFLRDYWQKKPLLIRQAFPNFTAPVTP----EELAGLACEEGIHSRM----VLEHGGSKPWELRYGPFNEDDFSAL--PAEGWSILVSDVEKALPEIMAIVEPFRFIPDWRIDDLMMSYAPPGGSVGAHVDQYDVFLLQAHGRRRWMIESQARDDE---NAYIDGLDLRILKDFNPDQTWDLEPGDLLYLPPGVPHHGIALT-ECMTWSIGFRAPAHSDI 220          
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Match: UPI00141DD34C (cupin domain-containing protein n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI00141DD34C)

HSP 1 Score: 233 bits (593), Expect = 1.040e-70
Identity = 119/214 (55.61%), Postives = 144/214 (67.29%), Query Frame = 3
Query:  231 FMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVESRIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVPEASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQWSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVPHHGVSLDDECITYSVGFRAP 872
            F+R YWQ+KPLL+R A PG     T  +  +EL  LAC E VESR+I       GG   W+L  GPFE  DF R+      WTLLV EV+R+VP  + L  RF FLP+WRIDD+MVS+AP GGGVGPHVD YDVFL+Q  G R+W I  + +    E E LVP +DVRIL  F+ D  W L PGD+LYLPPR+PH GV+L D C+T+SVGFRAP
Sbjct:   14 FLREYWQKKPLLVRGALPGF----TAPIGPDELAALACEEMVESRLI----LEKGGAYPWELRHGPFEPEDFERL--PPTHWTLLVQEVDRYVPAVAALRDRFRFLPNWRIDDVMVSFAPEGGGVGPHVDQYDVFLVQGLGRRRWRIHHEPV----EEEHLVPDLDVRILANFEPDAEWVLEPGDLLYLPPRIPHEGVALGD-CMTFSVGFRAP 212          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig694.3.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CR86_9STRA1.800e-8759.31Bifunctional lysine-specific demethylase and histi... [more]
A0A6H5JEP9_9PHAE4.230e-8755.60Bifunctional lysine-specific demethylase and histi... [more]
A0A0G4ED40_VITBC5.190e-8158.82Bifunctional lysine-specific demethylase and histi... [more]
A0A2A8D074_9BACT2.670e-7555.11Cupin n=1 Tax=Longibacter salinarum TaxID=1850348 ... [more]
UPI00035C4ACC4.730e-7252.38cupin domain-containing protein n=1 Tax=Kushneria ... [more]
A0A1I1P4N4_9GAMM2.120e-7152.1050S ribosomal protein L16 3-hydroxylase n=1 Tax=Th... [more]
A0A1V0DGQ7_9BACT4.000e-7154.05Cupin n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0... [more]
A0A2T2S5M7_9BACT6.150e-7151.91Cupin domain-containing protein n=1 Tax=Bacteroide... [more]
A0A258S3L6_9GAMM7.980e-7152.25JmjC domain-containing protein n=1 Tax=Gammaproteo... [more]
UPI00141DD34C1.040e-7055.61cupin domain-containing protein n=1 Tax=Rhodocalor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig694contigP-wetherbeei_contig694:7081..8949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJ65
PFAMsCupin_4
Model size914
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons7
Evalue2.58e-75
EggNOG OGsCOG2850@1|root,2S0FU@2759|Eukaryota
Ec32 ortholog descriptionSecreted cupin domain protein
Ec32 orthologEc-10_000260.1
DescriptionCupin superfamily protein
Cds size852
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig694.3.4prot_P-wetherbeei_contig694.3.4Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig694 7143..8949 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186947.2648935-UTR-P-wetherbeei_contig694:7080..71421683186947.2648935-UTR-P-wetherbeei_contig694:7080..7142Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig694 7081..7142 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186947.2803092-CDS-P-wetherbeei_contig694:7142..73801683186947.2803092-CDS-P-wetherbeei_contig694:7142..7380Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 7143..7380 +
1683186947.290857-CDS-P-wetherbeei_contig694:7518..75821683186947.290857-CDS-P-wetherbeei_contig694:7518..7582Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 7519..7582 +
1683186947.3011396-CDS-P-wetherbeei_contig694:7699..78501683186947.3011396-CDS-P-wetherbeei_contig694:7699..7850Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 7700..7850 +
1683186947.3116121-CDS-P-wetherbeei_contig694:7979..81081683186947.3116121-CDS-P-wetherbeei_contig694:7979..8108Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 7980..8108 +
1683186947.3222964-CDS-P-wetherbeei_contig694:8342..84421683186947.3222964-CDS-P-wetherbeei_contig694:8342..8442Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 8343..8442 +
1683186947.3329167-CDS-P-wetherbeei_contig694:8540..86011683186947.3329167-CDS-P-wetherbeei_contig694:8540..8601Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 8541..8601 +
1683186947.343996-CDS-P-wetherbeei_contig694:8840..89491683186947.343996-CDS-P-wetherbeei_contig694:8840..8949Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig694 8841..8949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig694.3.4

>prot_P-wetherbeei_contig694.3.4 ID=prot_P-wetherbeei_contig694.3.4|Name=mRNA_P-wetherbeei_contig694.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=284bp
MKLLIFLFPYCALGFVAQSPSCRPYARPCAPVHSVQAAKAPTIEEWKGWS
DADVDTFMRNYWQRKPLLIRQAFPGCSNGGTPLVSKEELLNLACAEDVES
RIIQGFVAPPGGEARWQLSSGPFEEADFSRVFFGKVPWTLLVNEVNRHVP
EASDLLQRFAFLPSWRIDDLMVSYAPRGGGVGPHVDSYDVFLLQVAGTRQ
WSIETQAISTEAEVERLVPGIDVRILKGFQEDHTWTLNPGDMLYLPPRVP
HHGVSLDDECITYSVGFRAPSHREVGCLMGPILG
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mRNA from alignment at P-wetherbeei_contig694:7081..8949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig694.3.4 ID=mRNA_P-wetherbeei_contig694.3.4|Name=mRNA_P-wetherbeei_contig694.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1869bp|location=Sequence derived from alignment at P-wetherbeei_contig694:7081..8949+ (Phaeothamnion wetherbeei SAG_119_79)
GTTGATCTCTCTCTGACGGGCAAAAATTTGAGAGAAAAGGTCCCTTTGGT TGCCCCCTTTCGATGAAATTGCTCATCTTCCTTTTTCCGTATTGCGCTCT CGGATTCGTGGCGCAGAGCCCCTCATGTCGCCCATATGCGAGGCCGTGCG CGCCAGTTCACAGCGTGCAAGCAGCCAAGGCACCCACAATCGAAGAATGG AAGGGATGGAGCGACGCCGATGTTGATACGTTCATGAGGAATTACTGGCA AAGGAAGCCGCTTCTTATCCGCCAGGCGTTCCCAGGGTGTTCAAACGGAG GTACGTTGCATGTCTGCGCTGTTGCCGCTTCTCTTCTCGCCTCGGCACGC TGGCACTTTGTGCTTGTTCACTCGAGCAGGTTTCTTCGTGTATTCATCAT AGAGCTATGGCTTAATATCGTTCCCTGACTTTGATCAGGCACACCCCTTG TGAGCAAGGAAGAGCTGCTGAACTTGGCCTGCGCCGAGGATGTCGAGAGC AGGTAAGCTCATACTCCTTCTCCTTAAATTTCAAATTTCCTCTGATTCTT CCGCCGCAGGAGGTTTATACCTCGTGACGAAAGTCAAGCTTGAGTGATTC CGTTGTTCCAATTGCGCAGGATCATTCAGGGCTTCGTGGCGCCCCCAGGC GGTGAGGCCCGCTGGCAACTCAGCAGCGGGCCGTTTGAAGAAGCGGACTT CTCCCGGGTGTTCTTCGGAAAGGTCCCCTGGACGCTTCTCGTCAACGAGG TCAACAGGCACGTGCCCGAGGTAAGGCCTTTTTGCTCTCCGAACATTGAC CCTCCGCCTGTTCTTGGCTGAAAGAGCCGCTGCTCGCTTTTTCCCCCATT TCATCCTCATCTTTCTTCGCCGCTGATTTCTCCTACATGTAATGCCCAGG CGAGCGATCTGCTGCAACGATTTGCCTTCCTGCCGTCGTGGAGGATAGAC GACCTGATGGTCAGCTACGCCCCCCGCGGCGGCGGCGTTGGCCCGCACGT CGATTCGTACGACGTCTTTCTTCTGCAGGTGAGGAATCGTTGCCAGGTTC TCGGGTGTTGTGGTACACTAAGAGCGCCGTTTTCAGTTACAGTTGCCGCT TAAGCTGTGATCGTGTCGCGGCCGCCAAAGGAAAGCAGTCTACGGCCAAC GAACTATTTGGCTCAGATAGATTGGCACGCGAAACCAGGTTCCAACGGAA GAGAACGACACGAAAATGTCAGCGTTGACGGCACTCCCTCCCTGTTCCCC AATGCCAATCAGGTTGCGGGCACCCGGCAATGGTCTATCGAAACACAAGC CATCAGCACCGAGGCCGAGGTGGAACGGCTCGTGCCGGGAATCGACGTCA GAATACTCAAAGGTGCCGCCTGCGGCAAATATGGTTAAACCGTCGACTGC CTGCAGGAATTGTTGCAGATGATCATGGTGCCATCAATATTTTGTCCCTC ACACGTTCAGGTTTCCAGGAGGACCACACCTGGACGCTCAACCCGGGCGA CATGCTCTACCTGCCTCCGAGGTAAGCATTCCGTTGACGGATGCGTTGTG GCGAGTTGTGTATTTGCTGGGAAACGGTGTGGGAAAATGGACGGAATCAC CTTTTTCCTTTCCTTCTGAAATATTTTTTGAGCACTGGGTAGCTTTTCTT GGGTCGGCCGGATGCCTAGACTAACAACGCTTTATGCGCTTTCTTTCCTA TGGTCGCTTAACACAGTACCTTCGGCGTCCGTAAATCCCGGCGGACCCCT CTTTCGCCAGGGTTCCGCATCATGGGGTCAGCCTCGACGATGAGTGCATC ACATATTCTGTCGGCTTCCGGGCACCGTCTCATAGAGAGGTGGGATGCTT AATGGGACCTATTCTCGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig694:7081..8949+

>mRNA_P-wetherbeei_contig694.3.4 ID=mRNA_P-wetherbeei_contig694.3.4|Name=mRNA_P-wetherbeei_contig694.3.4|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=852bp|location=Sequence derived from alignment at P-wetherbeei_contig694:7081..8949+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAATTGCTCATCTTCCTTTTTCCGTATTGCGCTCTCGGATTCGTGGC
GCAGAGCCCCTCATGTCGCCCATATGCGAGGCCGTGCGCGCCAGTTCACA
GCGTGCAAGCAGCCAAGGCACCCACAATCGAAGAATGGAAGGGATGGAGC
GACGCCGATGTTGATACGTTCATGAGGAATTACTGGCAAAGGAAGCCGCT
TCTTATCCGCCAGGCGTTCCCAGGGTGTTCAAACGGAGGCACACCCCTTG
TGAGCAAGGAAGAGCTGCTGAACTTGGCCTGCGCCGAGGATGTCGAGAGC
AGGATCATTCAGGGCTTCGTGGCGCCCCCAGGCGGTGAGGCCCGCTGGCA
ACTCAGCAGCGGGCCGTTTGAAGAAGCGGACTTCTCCCGGGTGTTCTTCG
GAAAGGTCCCCTGGACGCTTCTCGTCAACGAGGTCAACAGGCACGTGCCC
GAGGCGAGCGATCTGCTGCAACGATTTGCCTTCCTGCCGTCGTGGAGGAT
AGACGACCTGATGGTCAGCTACGCCCCCCGCGGCGGCGGCGTTGGCCCGC
ACGTCGATTCGTACGACGTCTTTCTTCTGCAGGTTGCGGGCACCCGGCAA
TGGTCTATCGAAACACAAGCCATCAGCACCGAGGCCGAGGTGGAACGGCT
CGTGCCGGGAATCGACGTCAGAATACTCAAAGGTTTCCAGGAGGACCACA
CCTGGACGCTCAACCCGGGCGACATGCTCTACCTGCCTCCGAGGGTTCCG
CATCATGGGGTCAGCCTCGACGATGAGTGCATCACATATTCTGTCGGCTT
CCGGGCACCGTCTCATAGAGAGGTGGGATGCTTAATGGGACCTATTCTCG
GT
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