mRNA_P-wetherbeei_contig6935.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6935.1.1
Unique NamemRNA_P-wetherbeei_contig6935.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A835ZL65_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL65_9STRA)

HSP 1 Score: 507 bits (1305), Expect = 5.010e-176
Identity = 244/336 (72.62%), Postives = 275/336 (81.85%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMEDGRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPFDAREVAVPRMG---TYVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCF PGVGD  GCR LTRAQLDQIC+RA+CTI+SRMSNAHLDAYVLSESSLFVY HKV++KTCGTTTLLRCIA LLQHA +G+GM+LEWVGYSRKNFTFPGDQL+PH+SFEQEL YLR H HLS RLDG+GHVLGPVTGDHWFVYVADK DRPN  ATDR INIMMFD+HP+ +                   R   GR MT ASG+A+LVPGA VD CAFEPCGYSMNA+ FESYYTIHVTPE +CSYASFETNNP++SYRSIVNNVLNVFRP+R+V+TMMAD+AGL TM+ESPFD   +  P  G    Y RTS+ S +VEGDCC ++ N+
Sbjct:  102 TLEVCFKPGVGDQHGCRALTRAQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRHKVVVKTCGTTTLLRCIAYLLQHAGRGLGMELEWVGYSRKNFTFPGDQLYPHASFEQELDYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRVINIMMFDLHPDCAAKFVRGDAAAGADGTAVSARAA-GRDMTVASGVADLVPGATVDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLNVFRPRRFVLTMMADEAGLKTMAESPFDQLSLPAPAFGGAAAYARTSMCSTKVEGDCCLLLANY 436          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A835YIR2_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR2_9STRA)

HSP 1 Score: 504 bits (1297), Expect = 1.190e-175
Identity = 246/345 (71.30%), Postives = 281/345 (81.45%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAK--GMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMEDGR----------AMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPFDAREVAVPRMGTYVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCF PGVGD RGCR LTR QLDQIC+RA+CTI+SRMSNAHLDAYVLSESSLFVY +KV+IKTCGTTTLLRC+A LLQHA    G+G++LEWVGYSRKNFTFPGDQL+PH+SFEQELAYLR H HLS RLDG+GHVLGPVTGDHWFVYVADK DRPN  ATDR  NIMMFDMHPE++           C  F++ +   DGR          AMT ASGIA+LVPGA +D CAFEPCGYSMNA+ FESYYTIHVTPE +CSYASFETNNP++SYRSIVNNVL VFRP+R+V+TMMAD+AGL TM+E+PFD   V +P  G Y RTS+ S +VEGDCC ++ N+
Sbjct:   49 TLEVCFKPGVGDARGCRALTREQLDQICKRARCTILSRMSNAHLDAYVLSESSLFVYRYKVVIKTCGTTTLLRCVAYLLQHAGAHGGLGLELEWVGYSRKNFTFPGDQLYPHASFEQELAYLRQHQHLSARLDGSGHVLGPVTGDHWFVYVADKYDRPNFTATDRICNIMMFDMHPESAA----------C--FVRDDIGPDGRHTTTARAAGHAMTVASGIADLVPGAAIDACAFEPCGYSMNAIQFESYYTIHVTPEAACSYASFETNNPYRSYRSIVNNVLGVFRPRRFVLTMMADEAGLKTMAENPFDQLSVPIPGFGAYARTSMCSTKVEGDCCLLLANY 381          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: D7G8P6_ECTSI (Adenosylmethionine decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8P6_ECTSI)

HSP 1 Score: 491 bits (1265), Expect = 2.400e-170
Identity = 234/334 (70.06%), Postives = 277/334 (82.93%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMEDGRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPFDAREVAVP-RMGTYVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCF PG+G+P+GCR LTR  LD++C RAKCTI+ ++SN +LDAYVLSESSLFVYPHKV++KTCGTTTLLRC+ATLLQ A +  G+ LEW+GYSRKNFTFP DQLFPHSSFEQEL YLR+H HL KRL+GAG+VLGPVTGDHWFVY+ADK DRP+  ATDRTIN+MMFDMHP+ ++            +F K E    GR MT+ +GIA LVPGA VDD AF+PCGYSMNA+ ++SYYTIHVTPE+SCSYASFETNNPFKSYRSI+NNVLNVFRPKR+V+TM+ADKAGL T++E+PFD  ++ +P R   Y+RTSV S  VEGDC CIMG W
Sbjct:   87 TLEVCFKPGIGNPQGCRALTRQSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAK------------HFYK-EACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITENPFDVEKIELPLRKAQYIRTSVCSTVVEGDCVCIMGAW 407          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: W7T3C1_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3C1_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 5.150e-137
Identity = 202/337 (59.94%), Postives = 255/337 (75.67%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMEDGRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSES----PFDAREVAVPRMGTYVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCF PGVG  RGCR LTR QLD +C++A+CTI+++MSNA+ DAYVLSESSLFV+P K+++KTCGTTTLLRC+  LL++ A  +G++LEWVGYSRKN++FPGDQ FPHSSF+QEL+YLRSH+ LS +L+G+G+VLGPVTGDH++VYVAD+  RP+    DR +NIMMFDM PEA+              F K E+  D + MT+ SGIA+LVPGA +D  AF+PCGYSMNA+ + +Y TIHVTPE  CSYASFETN P KSY S++NNVL VFRP+R+V+TMMAD+A +  M  +    PF+   VAVP +G Y R S S+   E D  C MG W
Sbjct:  135 TLEVCFKPGVGHARGCRELTRRQLDVLCRKARCTILNQMSNAYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLRYTA-ALGLELEWVGYSRKNYSFPGDQAFPHSSFDQELSYLRSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPEAAAV------------FYK-EQSGDAKEMTQKSGIADLVPGASIDAFAFDPCGYSMNAITYGNYATIHVTPEADCSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADQAAVLEMESNKQRLPFERAHVAVPGLGAYSRASSSTTIFEKDYRCFMGTW 457          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A8J2WZ11_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZ11_9STRA)

HSP 1 Score: 397 bits (1019), Expect = 1.210e-133
Identity = 202/339 (59.59%), Postives = 247/339 (72.86%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSH-AHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMED----GRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESP-FDAREVAVPRMGTYVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCFLPG GD RGCR LTRAQLD I + A+CTI+SRMSNAHLDAYVLSESSLFVY HKV++KTCG TTLLRC+  L+Q A   +G+QLEWVGYSRKN+ FP DQ+ PH  FE EL YL++H     K  DG+G+VLGP+TGDHWFVYV+D+ +RP  +AT+RT+N+MMFD+  +  R           +  L+G+   D    GRAMT+ SG+  L+PG +VDD AF PCGYS+NA+ FESY T+HVTPE SCSYASFETN   KSY S+V NVL VFRPKR V+T+ AD+AGL  +  S  FD +        TYVR ++SS QVE DC C+M N+
Sbjct:   36 TLEVCFLPGAGDIRGCRGLTRAQLDCILEEARCTILSRMSNAHLDAYVLSESSLFVYAHKVVVKTCGRTTLLRCLRRLVQEATSTLGLQLEWVGYSRKNYCFPDDQVAPHGCFEDELRYLKAHQGDAEKVFDGSGYVLGPLTGDHWFVYVSDQCERPASSATERTVNVMMFDLPEDVRR-----------HFHLQGDEDSDLRAAGRAMTQRSGLKALIPG-KVDDHAFAPCGYSLNALSFESYTTVHVTPEASCSYASFETNTALKSYGSLVKNVLAVFRPKRVVLTLFADEAGLRELPRSALFDGQPRLDVSGSTYVRENLSSTQVEHDCVCMMANY 362          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A7S1UFX8_9STRA (Adenosylmethionine decarboxylase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFX8_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 3.710e-131
Identity = 189/334 (56.59%), Postives = 241/334 (72.16%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMEDGRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPFDAREVAVPRMGTYV-RTSVSSIQVEGDCCCIMGNW 1179
            TLEVCF PGVG   GCR L RA L++I  RAKCTI+S +SN+HLDAYVLSESSLFVYP+KV++KTCG TTLLRC+  LL+ A +  G +LEWVGYSRKNF +P  QLFPH+SF  E+ YL+ H+    +L G+ H+LGP+TGDHWFVYVADK++RP    +DRTINIMMFDMH +A++     + P                  T ASGI  L+PGAQ+D   FEPCGYSMNA+  +SY TIH+TPE +CSYASFETN   +SY +++ NVL +FRP+R+V+TM AD+AGLA++SE PF+ + + +PR G Y+ R + S+  VE D  C MG W
Sbjct:   89 TLEVCFKPGVGLEGGCRNLPRASLNRILTRAKCTIMSIVSNSHLDAYVLSESSLFVYPYKVVLKTCGATTLLRCLPYLLREARRYCGCELEWVGYSRKNFAYPTQQLFPHTSFNDEMGYLQKHSKYYDKLSGSAHILGPLTGDHWFVYVADKSERPMEMESDRTINIMMFDMHEDAAQMFYKDKYP-------------TAEEQTMASGINMLMPGAQIDAQCFEPCGYSMNAIQHDSYSTIHITPESACSYASFETNTKLRSYTALIRNVLQLFRPRRFVLTMFADEAGLASLSEDPFEDKALLLPRFGMYIQRNAASNTTVEVDTVCRMGCW 409          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: F0Y0A9_AURAN (Adenosylmethionine decarboxylase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0A9_AURAN)

HSP 1 Score: 373 bits (957), Expect = 1.860e-124
Identity = 194/341 (56.89%), Postives = 242/341 (70.97%), Query Frame = 1
Query:  181 TLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAK-----GMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGERMEDGRAMTEASGIANLVPGAQ-VDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSE-SPFDAR-EVAVPRMGTYVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCFLPGVG  RGCR LTRAQLD +   A+CTI+S +SNAHLDAYVLSESSLFVYP KV+IKTCG TTLLRC+  L+  A K     G+G++LEWVGYSRKN+ FP +Q  PH+SF +ELAYLR+H          G+VLGP+TGDHWFVYVAD+ +RP  +AT+RTINIMMFD+  +        R  F+     KG+     RAMT  SG+  L+P +  +DD AF PCGYSMNA+ FESY T+HVTPE SCSYASFETN   K Y S+V NVL VF+PK+ V+T+ AD+AGLA + + + FD   ++ +  +GTY R  +S + VE DC C+M N+
Sbjct:   19 TLEVCFLPGVGRERGCRDLTRAQLDTMLTEARCTILSHISNAHLDAYVLSESSLFVYPFKVVIKTCGRTTLLRCVRPLVDAATKAAEFGGLGLKLEWVGYSRKNYAFPDEQPSPHTSFGEELAYLRAHRD--------GYVLGPITGDHWFVYVADQCERPAASATERTINIMMFDLGEDV-------RDAFYLKPGEKGDLRSAARAMTARSGLGALIPSSSHLDDHAFAPCGYSMNALCFESYTTVHVTPEASCSYASFETNTALKGYASLVKNVLAVFKPKKVVLTLFADEAGLAELPKHATFDGLPKLDINPLGTYHRNDLSLLHVEHDCVCMMANY 344          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A7S0C0C1_9STRA (Adenosylmethionine decarboxylase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C0C1_9STRA)

HSP 1 Score: 362 bits (928), Expect = 4.560e-120
Identity = 181/339 (53.39%), Postives = 237/339 (69.91%), Query Frame = 1
Query:  223 GCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAA-TDRTINIMMFDMHPEASRGLKNSRLPFFCYNFLKGE---RMED------GRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPFDARE--VAVPRMGT--------YVRTSVSSIQVEGDCCCIMGNW 1179
            G R + R  LD++C RA+CTI+S +SN +LDAYVLSESSLFVYP+  ++KTCGTTTLLRCIA L++  A+ +G++++WVGYSRKNF+FPGDQ FPH SF QEL YL SH +LS+RL G G+ LGPVT DHWFV+VAD+ +R N    TDR +NIMMFD+    +          F Y+  +G+     ED       + MT  +GI +L PGA +D  AFEPCGYSMNA+ F+SY T+H+TPED  SYASFETN    SY S++NNV+ +F PKR+V+T+MAD+ GL  M  +PFD +E  + +P   +        Y R+ ++SIQVE DCCC+MGNW
Sbjct:   22 GLRKIARTDLDRVCARARCTILSSISNQYLDAYVLSESSLFVYPYMAVLKTCGTTTLLRCIAILIE-LARTVGLEIDWVGYSRKNFSFPGDQAFPHESFHQELEYLSSHHNLSERLQGNGYTLGPVTSDHWFVFVADQTNRANSQTDTDRVLNIMMFDIDQTVAS--------HFYYDQYEGQMEGESEDEAVSRISKTMTRRAGIDSLCPGAVIDPRAFEPCGYSMNAILFQSYSTMHITPEDGSSYASFETNQRVSSYNSLINNVIRMFNPKRFVMTLMADELGLEQMDSTPFDRQESKIIIPYATSQGKGGSMCYKRSQIASIQVEDDCCCMMGNW 351          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A1Z5JP29_FISSO (Adenosylmethionine decarboxylase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JP29_FISSO)

HSP 1 Score: 362 bits (928), Expect = 3.820e-119
Identity = 184/339 (54.28%), Postives = 237/339 (69.91%), Query Frame = 1
Query:  223 GCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNV--AATDRTINIMMFDMHPEASRGLKNSRLPFFCYN---------FLKGERMEDGRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPF----DAREVAVP--RMG---TYVRTSVSSIQVEGDCCCIMGNW 1179
            G R LTR QLD+IC RA+CTI+S +SN +LDAYVLSESSLFVYP+ +++KTCGTTTLLRCIATL+    + +G++++WVGYSRKNF FPGDQ FPH SF QEL YL SH +L +RLDG+G+ LGPVTGDHWFV+VAD+  R       TDR +NIMMFD+  + +          F YN           + +      A T+A+GI +L PGA +D  AFEPCGYSMNAV F SY T+H+TPE   SYASFETN    SY+S+++NV+  FRPKR+V+T+MAD+ GL  ++E+P      A ++ VP  + G   +Y R S +SI+VE DCCC+MGNW
Sbjct:   87 GLRNLTREQLDRICARARCTILSCISNQYLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIATLID-LGRTLGLEIDWVGYSRKNFNFPGDQSFPHQSFHQELDYLYSHRNLCERLDGSGYTLGPVTGDHWFVFVADQTLRSKALDCDTDRVLNIMMFDIDEQVAE--------LFYYNRYQESDDEPIAENDMKRIAAAQTKAAGIDSLCPGALIDSAAFEPCGYSMNAVLFRSYSTMHITPETGSSYASFETNQKVSSYKSLISNVIRTFRPKRFVMTLMADEGGLQQITENPLTDNASAAKIVVPFEKSGMKCSYKRASTASIKVEEDCCCLMGNW 416          
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Match: A0A7S2A5D5_TRICV (Adenosylmethionine decarboxylase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A5D5_TRICV)

HSP 1 Score: 355 bits (912), Expect = 2.490e-116
Identity = 193/379 (50.92%), Postives = 244/379 (64.38%), Query Frame = 1
Query:  181 TLEVCF----LPGV------------GDPRGCRLLTRAQLDQICQRAKCTIISRMSNAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQLEWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPVTGDHWFVYVADKADRPNVAA--TDRTINIMMFDMHPEASRGLKNSRLPFFCYNF----LKGERMED-----GRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYYTIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAGLATMSESPFDAREVAVP-RMGT------------------YVRTSVSSIQVEGDCCCIMGNW 1179
            TLEVCF     P V            G   G R L+R  LD++C+RA+CTI+S++SN +LDAYVLSESSLFVYP+ +++KTCGTTTLLRC+A L++   K +G++L+WVGYSRKNF FPGDQ FPH SF QEL YL SH +L +RLDG G+ LGPVTGDHWFV+VAD+  R  +    TDR +NIMMFD        +  S    F Y+     L GE  E+       A T+ +GI +  PGA +D  AFEPCGYSMNA+ F SYYT+H+TPE   SYASFETN    SY S++NNV+  FRPKR+V+T+MAD+ GL  M  +P   R V  P + G                   Y RT+++SI+VE DCCC+MGNW
Sbjct:   78 TLEVCFRSAATPDVDVEGEVMTAAVPGALVGLRRLSRVDLDRVCRRARCTILSKVSNQYLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCLAVLIELGRK-VGLELDWVGYSRKNFNFPGDQAFPHQSFHQELEYLYSHRNLCERLDGNGYTLGPVTGDHWFVFVADQTIRSKLCDLDTDRVLNIMMFD--------IDESVASIFYYDEHGGRLLGETEEECAERISAAQTKQAGIDSFCPGALIDPRAFEPCGYSMNAILFRSYYTMHITPEAGSSYASFETNQRVDSYASLINNVVRTFRPKRFVMTLMADEGGLKQMKANPLTGRIVIPPVKQGNGKAASPTNQASPPGKKMHYKRTTLASIKVEEDCCCMMGNW 447          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6935.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZL65_9STRA5.010e-17672.62Adenosylmethionine decarboxylase n=1 Tax=Tribonema... [more]
A0A835YIR2_9STRA1.190e-17571.30Adenosylmethionine decarboxylase n=1 Tax=Tribonema... [more]
D7G8P6_ECTSI2.400e-17070.06Adenosylmethionine decarboxylase n=2 Tax=Ectocarpu... [more]
W7T3C1_9STRA5.150e-13759.94Adenosylmethionine decarboxylase n=2 Tax=Monodopsi... [more]
A0A8J2WZ11_9STRA1.210e-13359.59Adenosylmethionine decarboxylase n=1 Tax=Pelagomon... [more]
A0A7S1UFX8_9STRA3.710e-13156.59Adenosylmethionine decarboxylase n=2 Tax=Phaeomona... [more]
F0Y0A9_AURAN1.860e-12456.89Adenosylmethionine decarboxylase n=1 Tax=Aureococc... [more]
A0A7S0C0C1_9STRA4.560e-12053.39Adenosylmethionine decarboxylase n=1 Tax=Proboscia... [more]
A0A1Z5JP29_FISSO3.820e-11954.28Adenosylmethionine decarboxylase n=2 Tax=Fistulife... [more]
A0A7S2A5D5_TRICV2.490e-11650.92Adenosylmethionine decarboxylase n=1 Tax=Trieres c... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6935contigP-wetherbeei_contig6935:313..1822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G8P6
Preferred nameAMD1
PFAMsAdoMetDC_leader,SAM_decarbox
Model size1179
Max annot lvl2759|Eukaryota
KEGG rclassRC00299
KEGG koko:K01581,ko:K01611,ko:K15203
KEGG ReactionR00178,R00670
KEGG Pathwayko00270,ko00330,ko00480,ko01100,ko01110,ko01130,map00270,map00330,map00480,map01100,map01110,map01130
KEGG ModuleM00034,M00133,M00134
Hectar predicted targeting categoryother localisation
GOsGO:0001701,GO:0003674,GO:0003824,GO:0004014,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006576,GO:0006595,GO:0006596,GO:0006597,GO:0006732,GO:0006766,GO:0006767,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0007275,GO:0008150,GO:0008152,GO:0008215,GO:0008216,GO:0008295,GO:0009058,GO:0009108,GO:0009110,GO:0009308,GO:0009309,GO:0009605,GO:0009607,GO:0009617,GO:0009790,GO:0009792,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0015939,GO:0015940,GO:0016032,GO:0016053,GO:0016458,GO:0016829,GO:0016830,GO:0016831,GO:0017144,GO:0019058,GO:0019079,GO:0019222,GO:0019752,GO:0019808,GO:0019810,GO:0032501,GO:0032502,GO:0032787,GO:0034641,GO:0042364,GO:0042398,GO:0042401,GO:0042742,GO:0043009,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046500,GO:0048519,GO:0048731,GO:0048856,GO:0050789,GO:0050829,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0060255,GO:0065007,GO:0070405,GO:0071704,GO:0072330,GO:0097164,GO:0098542,GO:0099402,GO:1901564,GO:1901566,GO:1901576
Exons2
Evalue3.93e-171
EggNOG OGsKOG0788@1|root,KOG0788@2759|Eukaryota
Ec32 ortholog descriptionS-Adenosylmethionine decarboxylase
Ec32 orthologEc-22_002520.1
EC4.1.1.17,4.1.1.50
DescriptionS-adenosylmethioninamine biosynthetic process
Cds size1179
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186946.929176-CDS-P-wetherbeei_contig6935:312..10911683186946.929176-CDS-P-wetherbeei_contig6935:312..1091Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6935 313..1091 +
1683186946.943021-CDS-P-wetherbeei_contig6935:1422..18221683186946.943021-CDS-P-wetherbeei_contig6935:1422..1822Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6935 1423..1822 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6935.1.1prot_P-wetherbeei_contig6935.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6935 313..1822 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6935.1.1

>prot_P-wetherbeei_contig6935.1.1 ID=prot_P-wetherbeei_contig6935.1.1|Name=mRNA_P-wetherbeei_contig6935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=393bp
GSSGGGAVAAGGRSGESLSDLSDSGDEDPGATTDGENADPDADADGEERE
YTGCFEGPEKTLEVCFLPGVGDPRGCRLLTRAQLDQICQRAKCTIISRMS
NAHLDAYVLSESSLFVYPHKVLIKTCGTTTLLRCIATLLQHAAKGMGMQL
EWVGYSRKNFTFPGDQLFPHSSFEQELAYLRSHAHLSKRLDGAGHVLGPV
TGDHWFVYVADKADRPNVAATDRTINIMMFDMHPEASRGLKNSRLPFFCY
NFLKGERMEDGRAMTEASGIANLVPGAQVDDCAFEPCGYSMNAVHFESYY
TIHVTPEDSCSYASFETNNPFKSYRSIVNNVLNVFRPKRYVITMMADKAG
LATMSESPFDAREVAVPRMGTYVRTSVSSIQVEGDCCCIMGNW
back to top

mRNA from alignment at P-wetherbeei_contig6935:313..1822+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6935.1.1 ID=mRNA_P-wetherbeei_contig6935.1.1|Name=mRNA_P-wetherbeei_contig6935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1510bp|location=Sequence derived from alignment at P-wetherbeei_contig6935:313..1822+ (Phaeothamnion wetherbeei SAG_119_79)
GGCAGCAGCGGCGGCGGCGCTGTGGCAGCGGGCGGCCGTAGCGGCGAGTC GCTCTCAGACCTGAGCGACTCGGGCGACGAAGACCCCGGCGCCACCACCG ACGGAGAGAACGCTGATCCGGACGCCGACGCCGACGGCGAAGAGCGCGAG TACACCGGCTGCTTCGAGGGCCCTGAGAAGACGCTGGAGGTCTGCTTCCT GCCGGGCGTGGGCGACCCACGCGGCTGCCGGCTGCTGACGCGCGCGCAGC TGGACCAGATCTGCCAGCGGGCCAAGTGTACCATCATCAGCCGGATGAGC AATGCGCACCTGGACGCGTATGTGCTCAGCGAGTCGAGCCTGTTCGTCTA CCCGCACAAAGTGCTGATTAAGACGTGCGGCACGACGACGCTGCTGCGCT GCATTGCGACGCTGCTGCAGCACGCCGCCAAGGGCATGGGCATGCAGCTC GAATGGGTTGGTTACAGCCGAAAGAACTTTACATTCCCCGGCGACCAGCT CTTCCCGCATAGCAGCTTCGAGCAGGAACTGGCCTACCTGCGGTCGCACG CGCACCTGTCAAAGCGGCTGGACGGCGCCGGACACGTCCTGGGCCCGGTG ACGGGCGACCACTGGTTCGTGTACGTCGCGGACAAGGCGGACCGCCCCAA TGTGGCGGCCACCGACCGCACAATCAACATCATGATGTTCGACATGCACC CAGAGGCGAGTAGGGGATTGAAAAATTCTCGTCTCCCTTTTTTCTGTTAC AATTTTTTGAAAGGAGAAAGGATGGAAGAGTGCGTTGGGATGGAACTCTT CTTAACTGAGTGAGATAATAATTCTTGTTTCTGTCCCTTTTTTTCTGAAC TGTTGGAAGGAGTGAGCTGGAAGGAGTCTGTTGTAACTGGACCTTTCGTT AACCTTGAAGCGACACAAGTAGAACCGGCTGCCTACCAGATGTTCGTCAT TTGCGTTCGGTCGGGTTCCCGTCTTCTTTTCAAGCTGCGTTCGCCTCGGA AACTCAGGAAATCCAACTATTCTCGCCCCCCCCCCAAAAAAAAATTCCCC CTCTCTTTTTCTCTGAAACAAACAGGTGGCCAAGTGCTTCTACAAGGTGG AACATGGCAGCGGGCGCGCTATGACGGAGGCGAGTGGCATCGCCAACCTC GTGCCGGGTGCGCAGGTCGACGACTGCGCCTTTGAGCCCTGCGGCTACAG CATGAACGCCGTCCACTTTGAGTCCTATTACACCATCCATGTCACGCCGG AAGACTCGTGCTCGTACGCCTCCTTCGAGACCAACAATCCGTTCAAGTCG TACCGCTCGATCGTCAACAACGTGCTCAACGTCTTTCGGCCGAAACGCTA CGTCATCACGATGATGGCAGACAAGGCCGGGCTGGCGACCATGTCCGAGA GCCCCTTCGACGCGCGCGAAGTGGCCGTGCCGCGCATGGGCACGTACGTG CGCACGTCGGTGTCTTCGATCCAGGTGGAGGGCGACTGCTGCTGCATCAT GGGCAACTGG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6935:313..1822+

>mRNA_P-wetherbeei_contig6935.1.1 ID=mRNA_P-wetherbeei_contig6935.1.1|Name=mRNA_P-wetherbeei_contig6935.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1179bp|location=Sequence derived from alignment at P-wetherbeei_contig6935:313..1822+ (Phaeothamnion wetherbeei SAG_119_79)
GGCAGCAGCGGCGGCGGCGCTGTGGCAGCGGGCGGCCGTAGCGGCGAGTC
GCTCTCAGACCTGAGCGACTCGGGCGACGAAGACCCCGGCGCCACCACCG
ACGGAGAGAACGCTGATCCGGACGCCGACGCCGACGGCGAAGAGCGCGAG
TACACCGGCTGCTTCGAGGGCCCTGAGAAGACGCTGGAGGTCTGCTTCCT
GCCGGGCGTGGGCGACCCACGCGGCTGCCGGCTGCTGACGCGCGCGCAGC
TGGACCAGATCTGCCAGCGGGCCAAGTGTACCATCATCAGCCGGATGAGC
AATGCGCACCTGGACGCGTATGTGCTCAGCGAGTCGAGCCTGTTCGTCTA
CCCGCACAAAGTGCTGATTAAGACGTGCGGCACGACGACGCTGCTGCGCT
GCATTGCGACGCTGCTGCAGCACGCCGCCAAGGGCATGGGCATGCAGCTC
GAATGGGTTGGTTACAGCCGAAAGAACTTTACATTCCCCGGCGACCAGCT
CTTCCCGCATAGCAGCTTCGAGCAGGAACTGGCCTACCTGCGGTCGCACG
CGCACCTGTCAAAGCGGCTGGACGGCGCCGGACACGTCCTGGGCCCGGTG
ACGGGCGACCACTGGTTCGTGTACGTCGCGGACAAGGCGGACCGCCCCAA
TGTGGCGGCCACCGACCGCACAATCAACATCATGATGTTCGACATGCACC
CAGAGGCGAGTAGGGGATTGAAAAATTCTCGTCTCCCTTTTTTCTGTTAC
AATTTTTTGAAAGGAGAAAGGATGGAAGACGGGCGCGCTATGACGGAGGC
GAGTGGCATCGCCAACCTCGTGCCGGGTGCGCAGGTCGACGACTGCGCCT
TTGAGCCCTGCGGCTACAGCATGAACGCCGTCCACTTTGAGTCCTATTAC
ACCATCCATGTCACGCCGGAAGACTCGTGCTCGTACGCCTCCTTCGAGAC
CAACAATCCGTTCAAGTCGTACCGCTCGATCGTCAACAACGTGCTCAACG
TCTTTCGGCCGAAACGCTACGTCATCACGATGATGGCAGACAAGGCCGGG
CTGGCGACCATGTCCGAGAGCCCCTTCGACGCGCGCGAAGTGGCCGTGCC
GCGCATGGGCACGTACGTGCGCACGTCGGTGTCTTCGATCCAGGTGGAGG
GCGACTGCTGCTGCATCATGGGCAACTGG
back to top