prot_P-wetherbeei_contig6912.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6912.2.1
Unique Nameprot_P-wetherbeei_contig6912.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length110
Homology
BLAST of mRNA_P-wetherbeei_contig6912.2.1 vs. uniprot
Match: A0A6H5JU63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU63_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.160e-13
Identity = 36/62 (58.06%), Postives = 44/62 (70.97%), Query Frame = 0
Query:   47 RGHKTVSAVKKRFRLTGSGHIKRGHCGKRHGTGPLSRTHKQRLGQTAALSGASKVKVMRQLG 108
            RGHKTVS+VKKR R+TGSG++KRG  G RH TGP  R+  + LGQT  + G  K KV+  LG
Sbjct:   29 RGHKTVSSVKKRVRITGSGNLKRGQSGMRHITGPKPRSRLRNLGQTKLILGKQKKKVLWMLG 90          
BLAST of mRNA_P-wetherbeei_contig6912.2.1 vs. uniprot
Match: A0A832I238_9BACT (50S ribosomal protein L35 n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A832I238_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.390e-6
Identity = 27/60 (45.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:   50 KTVSAVKKRFRLTGSGHIKRGHCGKRHGTGPLSRTHKQRLGQTAALSGASKVKVMRQLGK 109
            KT  +  KRF++TG+G +KRGH G RHG    SR  K++L  T  L+ A + +V+R LG+
Sbjct:    5 KTNRSAAKRFKITGTGKVKRGHSGVRHGMIGKSRDRKRKLTGTTVLARADQDRVLRMLGQ 64          
BLAST of mRNA_P-wetherbeei_contig6912.2.1 vs. uniprot
Match: A0A8J7WKW3_9ACTN (50S ribosomal protein L35 n=1 Tax=Actinocrinis puniceicyclus TaxID=977794 RepID=A0A8J7WKW3_9ACTN)

HSP 1 Score: 48.9 bits (115), Expect = 1.530e-5
Identity = 28/61 (45.90%), Postives = 36/61 (59.02%), Query Frame = 0
Query:   49 HKTVSAVKKRFRLTGSGHIKRGHCGKRHGTGPLSRTHKQRLGQTAALSGASKVKVMRQLGK 109
            +KT S  KKRFRLTG+G +KRG  GKRH       T+ +R+     +S A   K+ R LGK
Sbjct:    4 NKTHSGAKKRFRLTGTGKVKRGQAGKRHLLEHKPSTYTRRVTGEVVVSPADTKKIKRLLGK 64          
BLAST of mRNA_P-wetherbeei_contig6912.2.1 vs. uniprot
Match: A0A448Z9R7_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9R7_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.740e-5
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0
Query:   38 LPSPFEWQSRGHKTVSAVKKRFRLTGSGHIKRGHCGKRHGTGPLSRTHKQRLGQTAALSGASKVKVMRQL 107
            L +P  ++S G KT S  KKRFR+ GSG IKR   GK H TG L R    RLG +  + G    + +R+L
Sbjct:   62 LLTPLRYKS-GMKTHSGAKKRFRVRGSGSIKRPKSGKSHNTGYLKRQRANRLGHSTGIEGKKIEQRVRKL 130          
BLAST of mRNA_P-wetherbeei_contig6912.2.1 vs. uniprot
Match: A0A7S2UDZ0_9STRA (50S ribosomal protein L35 n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDZ0_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 4.040e-5
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:   50 KTVSAVKKRFRLTGSGHIKRGHCGKRHGTGPLSRTHKQRLGQTAALSGASKVKVMRQL 107
            KT  +  KRFR+ GSG IKR   G++H TG  +R    RLGQ+A ++G    K MR+L
Sbjct:   66 KTNRSAAKRFRIRGSGSIKRNKAGRQHNTGYKTRGRSNRLGQSAGVTGKEIEKRMRRL 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6912.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JU63_9PHAE2.160e-1358.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A832I238_9BACT1.390e-645.0050S ribosomal protein L35 n=1 Tax=Candidatus Eisen... [more]
A0A8J7WKW3_9ACTN1.530e-545.9050S ribosomal protein L35 n=1 Tax=Actinocrinis pun... [more]
A0A448Z9R7_9STRA1.740e-544.29Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2UDZ0_9STRA4.040e-546.5550S ribosomal protein L35 n=1 Tax=Attheya septentr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037229Ribosomal protein L35 superfamilyGENE3D4.10.410.60coord: 49..107
e-value: 2.1E-12
score: 49.5
IPR037229Ribosomal protein L35 superfamilySUPERFAMILY143034L35p-likecoord: 50..107
IPR021137Ribosomal protein L35PFAMPF01632Ribosomal_L35pcoord: 50..104
e-value: 2.6E-12
score: 47.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..95
IPR018265Ribosomal protein L35, conserved sitePROSITEPS00936RIBOSOMAL_L35coord: 50..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6912contigP-wetherbeei_contig6912:2645..2974 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6912.2.1mRNA_P-wetherbeei_contig6912.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6912 2634..3099 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6912.2.1 ID=prot_P-wetherbeei_contig6912.2.1|Name=mRNA_P-wetherbeei_contig6912.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
MNALASLAPRLWGAGAALGRQTWQASAAAAMRWPATILPSPFEWQSRGHK
TVSAVKKRFRLTGSGHIKRGHCGKRHGTGPLSRTHKQRLGQTAALSGASK
VKVMRQLGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037229Ribosomal_L35_sf
IPR021137Ribosomal_L35
IPR018265Ribosomal_L35_CS