mRNA_P-wetherbeei_contig6902.2.6 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: A0A835YVI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI8_9STRA) HSP 1 Score: 254 bits (648), Expect = 5.810e-81 Identity = 119/221 (53.85%), Postives = 159/221 (71.95%), Query Frame = 1
Query: 226 LPRGSYSFSTLAALIRLLNGGNQTVASEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAGDWQDPKVKQIARIQALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAEARRKLVMLHADADDKEAKAALQTELDMLARACFVVRLQWWRDVFYLPNAVHWGFYKPPMNKGLVAVLGLAEALVGLRQTWP 888
L G Y+ S+LAA++R+LNGG T +EGLDKLYGE+ M+RC R GTTDALEA++NDSW GDW+D +++ + + QA M++YHPMEHVG+ AY+ PKLV +GDWWF++A + W+ Y+V D+Y LLK +E+ R +A A + L ADD EA+AA Q + +VRLQ WR +FYLPNA+HW F KP + KG VA LGLAEA+VGL+QT+P
Sbjct: 28 LKTGGYTCSSLAAVLRVLNGGKSTTLTEGLDKLYGEVGMTRCLTRFIGTTDALEAIRNDSWVGDWKDRRIRNLVKFQAWTMLIYHPMEHVGYLAYIVPKLVPLNGDWWFAKACYWWVAYVVADLYISLLKFKELKRSDAAA---ALQLEQAADD-EARAAAQAAVAANQAKRRIVRLQVWRAIFYLPNAIHWSFVKPVLPKGAVAALGLAEAIVGLKQTFP 244
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: D8LAU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAU5_ECTSI) HSP 1 Score: 194 bits (494), Expect = 1.110e-57 Identity = 104/216 (48.15%), Postives = 136/216 (62.96%), Query Frame = 1
Query: 241 YSFSTLAALIRLLNGGNQTVASEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAGDWQDPKVKQIARIQALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAEARRKLVMLHADADDKEAKAALQTELDMLARACFVVRLQWWRDVFYLPNAVHWGFYKPPMNKGLVAVLGLAEALVGLRQTWP 888
YS ST+A +IR NGG T SEGL++LYG +S +R FR+ GT +A+ LK+ S A W D +++ +AR+QAL V YHPME V A + PKL D WW++R+DW W+ + +IDMY +LK RE+ RRE RRKL D + E A L+ L +A + V LQ R VFYLPNAVHW F KPP++ +VA LGL EA VG Q +P
Sbjct: 35 YSLSTIAQIIRYRNGGKDTRRSEGLNQLYGALSTARVIFRMQGTAEAVWELKHLSGADGWDDVRIRPLARLQALTNVFYHPMEEVALAGGIAPKLFPVDQAWWWARSDWAWLAFCIIDMYMNVLKGRELRRREEGVRRKL----RDCAESET-AGLRQALSQIAASKRQVALQQLRMVFYLPNAVHWAFIKPPVHPLVVAALGLGEAAVGAVQAFP 245
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: A0A067DAU4_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DAU4_SAPPC) HSP 1 Score: 136 bits (342), Expect = 4.120e-35 Identity = 73/217 (33.64%), Postives = 118/217 (54.38%), Query Frame = 1
Query: 241 YSFSTLAALIRLLNGGNQTVASEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAGDWQDPKVKQIARIQALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAEARRKLVMLHADADDKEAKAALQTELDMLARACFVVRLQWWRDVFYLPNAVHWGFYKPPMNKGLVAVLGLAEALVGLRQTWPH 891
+ +TLA +I T S GL + +IS +R R G + +EAL+NDSW DP+V+Q+ ++Q +M++Y+P+EHV + +V PK D ++ W +Y+V+DMYA L+ ++ +RE K++ D D +A A TEL + + + WR+V +LPN +HW + + + LV LG AE ++G+ QTWPH
Sbjct: 28 FGCATLARVIEFY-AAKPTRHSVGLGAVASQISYARYVTRFTGIFECIEALQNDSWTYADDDPRVRQLVKLQVYSMLLYYPLEHVSFVGFVAPKWFNVDAMRAMRQSCMAWTVYVVLDMYANHLRLNKLAKREKMLEAKII----DEADPDAVAERATELATIQSTRQYLIINQWRNVLFLPNCIHWSSERGIIPEVLVQFLGFAEGVLGIWQTWPH 239
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: A0A7S3USW6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USW6_HETAK) HSP 1 Score: 112 bits (281), Expect = 2.490e-26 Identity = 77/188 (40.96%), Postives = 105/188 (55.85%), Query Frame = 1
Query: 241 YSFSTLAALIRLLNGGNQTVASEGLDKLYGEISMSRCAFRLF-GTTDALEALKNDSWAG-DWQDPKVKQIARIQALAMVVYHPMEHVGWAAYVTPKLVR--ADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAEARRKLVMLHADADDKEAKAALQT-ELDMLARACFVVRLQWWRDVFYLPN 789
Y TL+ RLL N+ V S GLD L GEISM+R +RL G T +LEALKNDSWAG DWQD ++K+I + A + YH E GWAA P+ V A +++ +TW+ Y+V++++AC LK RE+ R+ A + L A DD + +AAL L A RL + +LPN
Sbjct: 44 YGLGTLSGCGRLLGYENERVLS-GLDALSGEISMARMVYRLTNGLTQSLEALKNDSWAGGDWQDKRIKKIYKAMAWCNLGYHVGEAWGWAAAYAPEAVPLPASSAKFWAVTCYTWLAYVVLELWACRLKLRELARKRAVLEK---CLEARPDDVKIRAALAAARLGQRGAAVQAARL-----LLFLPN 222
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: A0A7S2EGS5_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EGS5_TRICV) HSP 1 Score: 98.2 bits (243), Expect = 1.910e-20 Identity = 44/107 (41.12%), Postives = 69/107 (64.49%), Query Frame = 1
Query: 304 SEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAGDWQDPKVKQIARIQALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRRE 624
S GL K+Y ++SM R A RL+G +LEA++ SW W DP++ ++ ++ A +M +Y+P+EHV +A +V P LV+AD + + + + W YIV D+ C LK RE
Sbjct: 158 SPGLRKMYLDMSMVRYALRLYGFPSSLEAIRTGSWWAGWTDPRIHKLGKVMAWSMAMYYPLEHVAYARWVAPVLVKADAERYTALSCRAWTTYIVADLLGCFLKIRE 264
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: K0TAT8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TAT8_THAOC) HSP 1 Score: 93.6 bits (231), Expect = 1.920e-18 Identity = 63/199 (31.66%), Postives = 107/199 (53.77%), Query Frame = 1
Query: 304 SEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAG-DWQDPKVKQIARI-QALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAEARRKLVMLHADADDKEAKAALQTELDMLARACFVVRLQWWRDVFYLPNAVHWGFYK----PPMNKGLVAVLGLAEALVGLRQT 882
S GL KLYGEISM+R R +G +LE ++ SWAG W D ++ ++A+ A +M+ Y+P+EH+ +A + P+LVR D + + + + W YI D LK +E+ ++ A A R +M DDK+A + + + L V+LQ R + ++ +++W P +++ + L L EA V + Q+
Sbjct: 103 SPGLRKLYGEISMTRYVLRFYGFLQSLEGYRSGSWAGGQWNDGRIAKLAKYAMAGSMLAYYPLEHIAYAGWKCPELVRVDANKFSAISCVFWTTYIAGDFAVSFLKWKELGKK-ARAMRDDLMRAKRTDDKQAVIDILEKENELRGKLRHVKLQMLRCMLFILPSINWSLPNWATDPLLDELHLNGLMLGEAYVSVYQS 300
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: M4BUC1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUC1_HYAAE) HSP 1 Score: 82.8 bits (203), Expect = 1.400e-15 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 292 QTVASEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAGDWQDPKVKQIARIQALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLK 615
Q ++ + L ISM+R R G +A ALK SW+ D V+++ R+QAL+MVVYHP+EHV + +V PKL++ D + + W +Y+++D+YA L+
Sbjct: 43 QQETAQNIHALASNISMARYVLRFTGGLEAYTALKKGSWSCKDDDEHVQRLVRLQALSMVVYHPLEHVSYVGFVAPKLLKVDAMHFSRLSCRAWGVYVLLDIYASALR 150
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: K0SNF8_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SNF8_THAOC) HSP 1 Score: 75.9 bits (185), Expect = 7.520e-13 Identity = 53/187 (28.34%), Postives = 96/187 (51.34%), Query Frame = 1
Query: 340 MSRCAFRLFGTTDALEALKNDSWAG-DWQDPKVKQIARI-QALAMVVYHPMEHVGWAAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAEARRKLVMLHADADDKEAKAALQTELDMLARACFVVRLQWWRDVFYLPNAVHWGFYK----PPMNKGLVAVLGLAEALVGLRQT 882
M+R R +G +LE ++ SWAG W D ++ ++A+ A +M+ Y+P+EH+ +A + P+LVR D + + + + W YI D LK +E+ ++ E R L M DDK+A + + + L V+LQ R + ++ +++W P +++ + L L EA V + Q+
Sbjct: 1 MTRYVLRFYGFLQSLEGYRSGSWAGGQWNDGRIAKLAKYAMAGSMLAYYPLEHIAYAGWKCPELVRVDANKFSAISCVFWTTYIAGDFAVSFLKWKELGKKAREMRDDL-MRAKRTDDKQAVIDILEKENELRGKLRHVKLQMLRCMLFILPSINWSLPNWATDPLLDELHLNGLMLGEAYVSVYQS 186
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: B8BW24_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW24_THAPS) HSP 1 Score: 70.9 bits (172), Expect = 6.910e-11 Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 1
Query: 280 NGGNQTVASEGLDKLYGEISMSRCAFRLFGTTDALEALKNDSWAGD-WQDPKVKQIAR-IQALAMVVYHPMEHVGWAAYVTPKLVRADGD 543
+ V S + KLY ++SM+R A R +G +LE ++ SWAG W +P + +IA+ + A +M+VY+P+EHV +A + P LV+ D +
Sbjct: 100 SNNKNNVLSPSMRKLYLDLSMTRYALRFYGFLQSLEGFRSGSWAGGTWDNPMIAKIAKYLMAGSMLVYYPLEHVAYAGWQMPNLVKVDAN 189
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Match: A0A0C3QYG4_9AGAM (Uncharacterized protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QYG4_9AGAM) HSP 1 Score: 58.9 bits (141), Expect = 2.180e-6 Identity = 66/238 (27.73%), Postives = 100/238 (42.02%), Query Frame = 1
Query: 250 STLAALIRLLNGGNQTVASEGL------------DKLYGEISMSRCAFRLFGTTDALEALKNDSWAGDWQDPKVKQ---IARIQALAMVVYHPMEHVGW----AAYVTPKLVRADGDWWFSRADWTWILYIVIDMYACLLKRREIVRREAE-ARRKLVMLHADADD--KEAKAALQTELDMLARACFVVRLQWWRDVFYLPNAVHWGFYKPPM-NKGLVAVLGLAEALVGLRQTWPHT 894
+TL L+ LLN + S GL K+ G IS SR +RLFG ++ L A + P ++ I R+QALAM+VY+P+EH+ + Y P + W RA W +Y+V+ + + +E E AR + +A D AA + E L R ++L + ++ LP +HW K NK LV + G + W T
Sbjct: 53 TTLKILVPLLNWRARFRHSAGLRKTPNSPVADRFSKMAGLISDSRMLWRLFGLVPIIKWLS----AMERTPPSNRRLLTIERLQALAMLVYYPLEHLYYFGSHEVYKVPVKKLSTLAVWSCRA---WAVYVVLHFLHLREDFKLLQEKETELARNAVAEKKVEAGDLVPADHAATRAEYKTLQRKRRALKLDLFVNLVNLPQCLHWSLEKGYFQNKHLVDLFGWLAGIASFTSGWEAT 283 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6902.2.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6902.2.6 >prot_P-wetherbeei_contig6902.2.6 ID=prot_P-wetherbeei_contig6902.2.6|Name=mRNA_P-wetherbeei_contig6902.2.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=299bp RQKLNERCWRDTLATPLASSTATRWSRPSGACETVALALCWHRRIPSTGIback to top mRNA from alignment at P-wetherbeei_contig6902:1466..3236- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6902.2.6 ID=mRNA_P-wetherbeei_contig6902.2.6|Name=mRNA_P-wetherbeei_contig6902.2.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1771bp|location=Sequence derived from alignment at P-wetherbeei_contig6902:1466..3236- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6902:1466..3236- >mRNA_P-wetherbeei_contig6902.2.6 ID=mRNA_P-wetherbeei_contig6902.2.6|Name=mRNA_P-wetherbeei_contig6902.2.6|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=897bp|location=Sequence derived from alignment at P-wetherbeei_contig6902:1466..3236- (Phaeothamnion wetherbeei SAG_119_79)back to top |