mRNA_P-wetherbeei_contig6901.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A835ZDF2_9STRA (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDF2_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.340e-36 Identity = 82/147 (55.78%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 556 VGTAAATTRLGDDVFFG-CPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGMKVGDAA 993
V TA+A L DD FFG PLPP L G R A LD EGR+VATDH FVL NVY+PC+S EDA+ +E RRHFK DF AAL R RQL+ AGR VVL GDLNACA+ D + +SE + +S WSRW+RR+LG + AA
Sbjct: 86 VATASAAAGLADDAFFGGAPLPPPLRGERAAALDREGRVVATDHVDFVLFNVYAPCVS--GEDAARAEE-------RRHFKRDFNAALEARARQLVRAGRHVVLAGDLNACASPRDHCFAMSEADFLASPWSRWIRRMLGRSLESAA 223
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: D7FKG3_ECTSI (DNA-(apurinic or apyrimidinic site) endonuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG3_ECTSI) HSP 1 Score: 125 bits (314), Expect = 4.910e-28 Identity = 67/142 (47.18%), Postives = 91/142 (64.08%), Query Frame = 1
Query: 562 TAAATTRLGDDVFFGCPLPPV----LDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGM 975
T A+TT LGD FFG P V L R+A LD+EGR++ TDHG FVL NVY+PC+S S+D E+++ RR FK DF A L R ++ GR VVLVGDLNACA+ +D + +++ E +S WS+W+R +LG+
Sbjct: 109 TLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDSEGRVLVTDHGHFVLFNVYAPCVSSSSDD------EKEKTEDRRAFKRDFLATLEARIFEIRSRGRGVVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGL 244
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A7R9VGR4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VGR4_9CHLO) HSP 1 Score: 113 bits (282), Expect = 8.030e-24 Identity = 94/302 (31.13%), Postives = 130/302 (43.05%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVE-LASSLWSR-WLRRLLGMKVGDAAGG 999
R++T+NVNGLR+++A GG+ LL +L A+I+CFQE K+ R L A+ PG+ +F F R N R YSGV T VRR + P A G S P + +A AA + +DAEGR V TDHG+FVL NVY PC+ + + Q+ + +K + AL +R R+ + AGR V+LVGDLN C +D C + +E W R WLR L+ +A GG
Sbjct: 78 RVLTFNVNGLRTMAAGIGGIEKLLGALGADIVCFQEHKMRREDLDTTTAIVPGWESFFAFNRASN-RGYSGVATYVRR-ETAGVPVHAEEGLTGFLALDR-------------------------------------SLPKSRAPQALGPPWNNYAADA--------------------LESIDAEGRCVVTDHGAFVLFNVYGPCVGPVNPGDGAGDRSTQRTQ----YKRMYFEALDVRLRRSLAAGRRVLLVGDLNVCLDPIDSCDPGAASLEAFVKDRWDRRWLRGLV-----EAGGG 311
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A1Y1IBM6_KLENI (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IBM6_KLENI) HSP 1 Score: 112 bits (279), Expect = 2.080e-23 Identity = 92/297 (30.98%), Postives = 130/297 (43.77%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRH-YSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLG--DDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGMKVG 984
+IV++NVNGLR + E GGL LL +LDA+IIC QETK+ R+ L ++A++ GY +F F R ++ R +SGV T R GGT T+ P+ + + G A A +G + V+ G R+ ELD EGR V TDHG+FVL N+Y PC+ ++ R FK DF L R L+ AGR +V+VGDLN +D + +V + S WL+ +L G
Sbjct: 2 KIVSFNVNGLRPRAKEFGGLKQLLDALDADIICLQETKLARTDLSADVAVADGYESFFAFPRGKHARGGWSGVATFCRT--------------GGGTSGTSAVL---------------------------------PTAAEEGFTGVQHLRAGGALAEGVVGQYEAVWAG----ETGSRARLEELDQEGRTVVTDHGAFVLFNIYGPCVQPGDDE-------------RIAFKLDFYRTLQRRWESLLAAGRRLVVVGDLNIAPAAVDSVHAGPDVNASPS--RVWLQSMLRANGG 232
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A150GNH8_GONPE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GNH8_GONPE) HSP 1 Score: 106 bits (265), Expect = 4.270e-22 Identity = 85/259 (32.82%), Postives = 112/259 (43.24%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLN 879
R+VTWNVNGLR + GGL LL SL A+++CFQETK+ R L +LAL+ G+ +F F R K YSGV T RR +V P+ A G T A A S A ++ R A G L G + +LD EGR+V TD G+ V++NVY P ++ + A R +K F AL +R L+ GR VV+ GDLN
Sbjct: 4 RLVTWNVNGLRRIVTAFGGLGPLLESLHADVVCFQETKLTRGMLERDLALADGWESFFAFTR--GKVGYSGVATFCRR--DVAVPRHAEE---GFTGALALPPGVRPD-----------------------------SAAAAAALHPRWAAAG---------------------LGGEELLQLDGEGRVVVTDLGAVVVVNVYGPAITSEERAAE-----------RMGYKMRFYQALQLRLDDLLAGGRRVVMCGDLN 194
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A8J4B9H4_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B9H4_9CHLO) HSP 1 Score: 107 bits (268), Expect = 6.060e-22 Identity = 95/306 (31.05%), Postives = 126/306 (41.18%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASL-DAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPR----------VAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVELASSLWSRWLRRLLGMKVG 984
R++TWN+NGLR V A GGL LL +L A++ICFQETK+ R+ L ELAL+ G+ YF F R + Y+GV T RR ++ RA G G G VL PR + +LD EGR+V TDHG+FVL NVY P ++ + ER + R+ +K F AL +R + GR V+LVGDLN MD C + +L + + WLR LL VG
Sbjct: 4 RVLTWNINGLRRVVAAFGGLQRLLDALAPADVICFQETKLTRADLRRELALADGWDSYFAFTR--GRVGYAGVATFCRRDRSLP-------------------------------------------------------------HRAEEGFTGVLELPPGSGSRTVAGVTSSAVLH-PRWEAGGWHVDQLRKLDGEGRVVITDHGAFVLFNVYGPAITSE---------ERAEERM--PYKLQFYEALQLRLDSFLAEGRRVLLVGDLNIAPGPMDVCGATTRDFDLQRADRA-WLRGLLSRGVG 233
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: UPI001BF83215 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001BF83215) HSP 1 Score: 105 bits (262), Expect = 1.650e-21 Identity = 91/296 (30.74%), Postives = 125/296 (42.23%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRH--YSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLLGMKVG 984
+IVT+NVNGLRS ++ G LP LL S DA+IICFQETK+ R L +LA++ GY +F+ R ++ YSGV T R + A AA + T + R C A + DD L + ++D+EGR + TDHG FVL N+Y P A ++ ER Q FK F L R L+ GR +++VGDLN T MDC + E ++ + RW R +L G
Sbjct: 2 KIVTYNVNGLRSRISQFGSLPKLLDSFDADIICFQETKLRRQELTADLAVADGYESFFSCTRTSDRGRMGYSGVATFCRVKSAFSSTEVALPIAA-----------------------------------------QEGFTGLVENSHNRKCE-----ARNEIVDD------LEDEFAKEELLKVDSEGRCIITDHGHFVLFNLYGP-------RAECNDDERIQ------FKLTFFKILQKRWESLLRQGRRIIVVGDLNIAPTAMDCCDAGPDFE--TNEFRRWFRSILAESGG 230
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A8J4M027_9CHLO (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4M027_9CHLO) HSP 1 Score: 105 bits (261), Expect = 2.100e-21 Identity = 94/305 (30.82%), Postives = 126/305 (41.31%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASL-DAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRR-----HDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVELASSLWSRWLRRLLGMKVGDAAG 996
R++TWN+NGLR V A GGL LL +L A+++CFQETK+ R L ELAL+ G+ +F F R + YSGV T RR H +G GG+ T + S S A V ++ LD EGR+V TDHG+FVL NVY P ++ + ER + R+ +K F AL +R + GR VVLVGDLN +D C + + + + WLR LL VG G
Sbjct: 4 RVLTWNINGLRRVVAAFGGLQRLLDALAPADVVCFQETKLTRGDLRRELALADGWESFFAFTR--GRVGYSGVATFCRRDRSLPHHAEEGFTRVLEMPPGGSCRTITGD--------------------------------ESSAVLHSRWEAGGWQVD-------------------------QLRNLDGEGRVVITDHGAFVLFNVYGPAITSE---------ERAEERM--PYKLQFYKALQLRLDSFLAEGRRVVLVGDLNIAPDVVDVCGATPRDFDCRRADRA-WLRGLLSRGVGGGCG 237
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A2I4FDC0_JUGRE (DNA-(apurinic or apyrimidinic site) endonuclease n=21 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4FDC0_JUGRE) HSP 1 Score: 105 bits (262), Expect = 2.900e-21 Identity = 90/291 (30.93%), Postives = 124/291 (42.61%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASLDAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRH--YSGVLTAVRRHDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMDCSYRISEVELASSLWSRWLRRLL 969
+IVT+NVNGLRS ++ G LP LL S DA+IICFQETK+ R L +LA++ GY +F+ R ++ YSGV T R + A AA + T + + R C A + DD L + ++D+EGR + TDHG FVL N+Y P A ++ ER Q FK F L R L+ GR +++VGDLN T MDC + E+ + RW R +L
Sbjct: 2 KIVTYNVNGLRSRISQFGSLPKLLDSFDADIICFQETKLRRQELTADLAVAGGYESFFSCTRTSDRGRMGYSGVATFCRVKSAFSSTEVALPIAA-----------------------------------------QEGFTGLVENSQNRKCE-----ARNEIVDD------LEDEFAKEELLKVDSEGRCIITDHGHFVLFNLYGP-------RAECNDEERIQ------FKLTFFKILQKRWESLLRRGRRIIVVGDLNIAPTAMDCCDAGPDFEMNE--FRRWFRSIL 225
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Match: A0A8J4LZJ4_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LZJ4_9CHLO) HSP 1 Score: 105 bits (261), Expect = 4.820e-21 Identity = 94/305 (30.82%), Postives = 126/305 (41.31%), Query Frame = 1
Query: 103 RIVTWNVNGLRSVSAEGGGLPSLLASL-DAEIICFQETKVVRSALGPELALSPGYHLYFTFCRLQNKRHYSGVLTAVRR-----HDNVQGPKPASSAAAGGTVATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKPSTPAQSSRRARSCAVGTAAATTRLGDDVFFGCPLPPVLDGPRVAELDAEGRMVATDHGSFVLLNVYSPCLSKDSEDASMSEWERQQVRLRRHFKADFTAALTIRCRQLMVAGREVVLVGDLNACATTMD-CSYRISEVELASSLWSRWLRRLLGMKVGDAAG 996
R++TWN+NGLR V A GGL LL +L A+++CFQETK+ R L ELAL+ G+ +F F R + YSGV T RR H +G GG+ T + S S A V ++ LD EGR+V TDHG+FVL NVY P ++ + ER + R+ +K F AL +R + GR VVLVGDLN +D C + + + + WLR LL VG G
Sbjct: 4 RVLTWNINGLRRVVAAFGGLQRLLDALAPADVVCFQETKLTRGDLRRELALADGWESFFAFTR--GRVGYSGVATFCRRDRSLPHHAEEGFTRVLEMPPGGSCRTITGD--------------------------------ESSAVLHSRWEAGGWQVD-------------------------QLRNLDGEGRVVITDHGAFVLFNVYGPAITSE---------ERAEERM--PYKLQFYKALQLRLDSFLAEGRRVVLVGDLNIAPDVVDVCGATPRDFDCRRADRA-WLRGLLSRGVGGGCG 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6901.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6901.1.1 >prot_P-wetherbeei_contig6901.1.1 ID=prot_P-wetherbeei_contig6901.1.1|Name=mRNA_P-wetherbeei_contig6901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp LLSVLLLVGSFAAFHAINKPNLEDGEMSNSNAGCRIVTWNVNGLRSVSAEback to top mRNA from alignment at P-wetherbeei_contig6901:125..1471- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6901.1.1 ID=mRNA_P-wetherbeei_contig6901.1.1|Name=mRNA_P-wetherbeei_contig6901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1347bp|location=Sequence derived from alignment at P-wetherbeei_contig6901:125..1471- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6901:125..1471- >mRNA_P-wetherbeei_contig6901.1.1 ID=mRNA_P-wetherbeei_contig6901.1.1|Name=mRNA_P-wetherbeei_contig6901.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig6901:125..1471- (Phaeothamnion wetherbeei SAG_119_79)back to top |