mRNA_P-wetherbeei_contig690.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig690.2.1
Unique NamemRNA_P-wetherbeei_contig690.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig690.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig690contigP-wetherbeei_contig690:3101..6383 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1343
Hectar predicted targeting categoryother localisation
Exons6
Cds size1341
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig690.2.1prot_P-wetherbeei_contig690.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig690 3101..6383 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186944.5064855-CDS-P-wetherbeei_contig690:3100..35941683186944.5064855-CDS-P-wetherbeei_contig690:3100..3594Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig690 3101..3594 +
1683186944.515459-CDS-P-wetherbeei_contig690:3826..40371683186944.515459-CDS-P-wetherbeei_contig690:3826..4037Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig690 3827..4037 +
1683186944.5242426-CDS-P-wetherbeei_contig690:4702..48251683186944.5242426-CDS-P-wetherbeei_contig690:4702..4825Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig690 4703..4825 +
1683186944.532845-CDS-P-wetherbeei_contig690:5114..52341683186944.532845-CDS-P-wetherbeei_contig690:5114..5234Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig690 5115..5234 +
1683186944.5412152-CDS-P-wetherbeei_contig690:5516..57441683186944.5412152-CDS-P-wetherbeei_contig690:5516..5744Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig690 5517..5744 +
1683186944.5493724-CDS-P-wetherbeei_contig690:6218..63831683186944.5493724-CDS-P-wetherbeei_contig690:6218..6383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig690 6219..6383 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig690.2.1

>prot_P-wetherbeei_contig690.2.1 ID=prot_P-wetherbeei_contig690.2.1|Name=mRNA_P-wetherbeei_contig690.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=447bp
MAARFAARLSPSLSIHALIEEQKRELLLLKNTCGEEQEVAHDAEGYAPSS
TAGPADRRASSPGRKISGDMLGFGALETSGQCRGGQNGFGGPTARTAGNT
SVAAPYSADELAQKGESAALIGQLERELSSTVFALRAERESKMASEHLLA
DARDAARHHQHAADRNCRRLEAANRSLSEEIRQLRASREERIMPAPAPAE
AAAAAARAAMASEMAATRSAQDAERERARERDKQWMERELAAEKARSDGL
ADDVAALQAAVRAARREAAPAAGGSKPQAVRLVSSEVAAEALRWRRECDG
LRRRLTAAEEARGQLQAAFEAERVRAAALQEKVCKLEGEGDAHRGGGYGM
NGFLHHREKAEAATAGAGVAVAEAMAAGAGLNGSGDSPFRKQAEARGATR
DAQRRLDAERHLREDAEEQLRVCGHSNGGIRGRDNAAAAAAAATAGA
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mRNA from alignment at P-wetherbeei_contig690:3101..6383+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig690.2.1 ID=mRNA_P-wetherbeei_contig690.2.1|Name=mRNA_P-wetherbeei_contig690.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3283bp|location=Sequence derived from alignment at P-wetherbeei_contig690:3101..6383+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCACGATTCGCCGCAAGGCTCTCACCCTCTCTCTCCATCCACGC
GTTGATCGAAGAGCAGAAACGCGAGCTTCTGTTACTAAAAAATACATGCG
GGGAGGAGCAGGAGGTCGCTCACGACGCGGAAGGTTATGCGCCGAGCTCC
ACAGCTGGGCCTGCGGACCGACGTGCGAGTAGTCCCGGCAGAAAAATTTC
TGGCGACATGCTCGGGTTCGGAGCTTTGGAGACAAGCGGCCAGTGCCGAG
GAGGACAAAACGGTTTTGGAGGGCCAACAGCGAGAACAGCAGGAAACACC
TCTGTGGCAGCACCGTATAGTGCCGACGAACTTGCGCAGAAAGGAGAGAG
CGCGGCTTTGATCGGGCAGTTGGAGAGGGAGCTCTCTTCGACGGTGTTCG
CATTGCGGGCGGAGAGGGAGAGCAAAATGGCTTCCGAGCACTTGCTGGCC
GACGCCCGTGATGCGGCTCGCCATCACCAGCACGCAGCGGACAGGTGAGC
GTTGCTAGCGGGTTATGTCGATGTCGCTTTCCGTCGCCTTTTTAGGTGTG
CCCCACTTTCTGTTCTATTTTATGGCTTGGAGACTGCTCCATGGACCGGT
TTTGCAATTTTAAACTTTGTAAAGGGCGTCTCTTCTGTTGCTCCGTCCGA
ACTGCGTCTACGGCGCTGAGAACCTTCCTTAGAAGATATCGCCTCCCTCG
CGGGAATGTTTCCCCTCGTGTTCAAGAAACTGCCGCAGGCTCGAAGCCGC
CAACCGCAGCCTGTCGGAGGAGATCCGGCAGCTGCGGGCGAGCCGCGAGG
AGAGAATCATGCCGGCACCAGCGCCTGCAGAGGCGGCGGCAGCGGCGGCG
AGGGCGGCGATGGCATCGGAGATGGCAGCAACGCGCTCTGCCCAAGACGC
GGAGCGAGAGCGGGCGCGGGAGCGCGACAAGCAGTGGGTACGTGCTGCTG
TCTTGTGCGCGATTTCCGCCCTCCTGCTTCGCCATTAAGGAGTAATACGT
GTGTCACCTAGTTTTAAGTTGCCGTTGAGAGAACCCGACGGCTTTGTTTT
CTTCGGCAAAAGTCGAACTCTGAAAAGGTGCAACGTTCTGTCGAAGTATC
TTAGTGCATGCGAGGCCTTCCATCTCTTCTTGTGATCCGACCTTTCAATG
ACATGGTTCTGTTCCGTCTTCTTGATCGGTTCCCCTTGGCTATGAATCCG
GAGTTCTCCCTTGGCTATGAACCCTTCCGTCCGGAGTTCTCCCTTGGCTA
TGAACCCTCCGTTCTGTAGCTAGAGAGGCCGTTGTCCCACCTTGGCACTC
AGCGTCTTTTCAACCAGTAGATGCCTGGGCGGGCACGAGCGGTCTGGCTC
CTGTTTAGTAGTGACGTTTCCGTCTGCCGTTCCGGTCCCTCTGTCTTTTC
TCTTCTTATCCTCTCTCCCTTCCTCTCTCGAAACATTTTGCCCGGCGATC
GGTTGCCCACCTTGCTTCCGTACTTCCGTATGTCTGCCGCCCTTGCCGCC
GCCCGACACCGCTGTCGGCCGCCACTGCCGCCGTCGCCGCCGCCGTCGCC
GTCGCCGCCGTCGCCGCCTTCGCCGCCTTCGCCGCTCCTCTGCCACCGTC
AGATGGAGCGGGAGCTGGCGGCGGAGAAGGCGCGCTCCGACGGACTTGCC
GACGATGTCGCGGCGCTCCAGGCTGCTGTCCGCGCCGCCCGGCGGGAGGC
GGCGCCGGCAGCGGGCGGCAGCAAGGTGAGAGAACTGTGCATTGAGACTC
GTCTGTCTCGCCTATCTCGCCAGCTCTTTTCCTTCGTTGCACCATATCTT
TGGGTTCCTCCTGCTGTCGGAATCGTTAGCGCTGCATTGTCTTGGGATTG
CTCTCCTCGCTTCTGAAATTGCTTCACGTTGGCTATTGTGGCTGAGAATT
CCTTGGCGGCTTTGTTGAATCCAAGCTTCTGACTTTGCCATCATTCGTTT
TGTCTCTTCTCCCGTCTATCCGGCCCGCCGCTCCGTCCTTTTCTTGCTCC
TCGTGTCGCCGCAGCCACAGGCCGTGCGTCTCGTATCATCCGAGGTGGCG
GCGGAGGCGCTCCGGTGGCGCCGCGAGTGCGACGGGCTTCGCCGGCGGCT
GACAGCCGCTGAGGAAGCCCGAGGACAGCTCCAGGTATGCAGCTGTCAAA
ATGAAACGGACGAGACAGAGTGCGGAAACGACAGAACTGGACGGTTTCTT
GTTAGTTACCTGTTAGTTATGACTTTGAAACGACCACAAGGTATCCCAGA
GGTTTCTCGCTGATTCGCTTGGTGTTGTTAACCTTTTCGGGTCAGCGGCA
TTTCGGCTCTCGCAGTCAGAGCCATTCGCGTCGGAACGGAAGGCTTTATA
CGTTTCTGTCCCTTCCCTTTCGCTAGTTGGACGCTGAAGAATGAACTTGC
GCTCCGTTTTTCTCAGGCAGCCTTTGAGGCGGAGAGGGTCCGGGCGGCGG
CGCTGCAAGAAAAGGTCTGCAAGTTGGAGGGCGAAGGCGACGCACACCGG
GGAGGCGGCTACGGGATGAATGGCTTCCTTCATCACCGCGAGAAAGCTGA
AGCCGCGACGGCGGGGGCGGGGGTGGCGGTTGCGGAGGCGATGGCGGCAG
GAGCGGGCCTCAACGGGAGCGGGGACTCTCCGTTCCGAAAACAGGCAAGT
CGCGCGGCAATGGCAGCTCCCTTTTCTCTCTCTTCTCTGTTTTGTCGTTG
TTGTTTCCCGCTGTTTAATTCCGTTGTGCAGACTTCTTCGTTTGCAGTGT
GGACTGCATCTTAGTCGATACCTTTCACATCTTGCACGGGTCCGACGCGG
AGTGTACCTGCGGACGACCCCACCGTCGGTGGCGGCGGAGGTGGCGGCGG
CGACGCCGGAGCGGCATGTCAGCACCCTGCAGTGCGAGATCATTTCCGCC
GAGCGGGGATACGTTCAGTTCTCGTTCGGTCATGATACGCCGTCGTTTGG
TGATTTTGTGTCCAGCTTTGGAGAACATTAGCTTGACTGGATTCTTCTTT
TTCCATCCCTTCCATGTACCTTTTCTTACTGCTGTTTTCTTGTTTCAAAG
GTAGCAGAGCCGTTTTGTCCCCTTTTTCGGGGCGCAACCTCTGTGACGCA
CCCGCTCGTCCTCGACAGGCGGAGGCCCGCGGTGCGACGCGCGATGCGCA
GCGGCGGCTCGACGCCGAGCGCCACCTACGCGAAGACGCCGAAGAGCAAC
TTCGTGTTTGCGGCCACAGTAACGGCGGCATCAGAGGCCGCGACAACGCT
GCTGCAGCGGCCGCGGCAGCGACGGCGGGAGCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig690:3101..6383+

>mRNA_P-wetherbeei_contig690.2.1 ID=mRNA_P-wetherbeei_contig690.2.1|Name=mRNA_P-wetherbeei_contig690.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1341bp|location=Sequence derived from alignment at P-wetherbeei_contig690:3101..6383+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCACGATTCGCCGCAAGGCTCTCACCCTCTCTCTCCATCCACGC
GTTGATCGAAGAGCAGAAACGCGAGCTTCTGTTACTAAAAAATACATGCG
GGGAGGAGCAGGAGGTCGCTCACGACGCGGAAGGTTATGCGCCGAGCTCC
ACAGCTGGGCCTGCGGACCGACGTGCGAGTAGTCCCGGCAGAAAAATTTC
TGGCGACATGCTCGGGTTCGGAGCTTTGGAGACAAGCGGCCAGTGCCGAG
GAGGACAAAACGGTTTTGGAGGGCCAACAGCGAGAACAGCAGGAAACACC
TCTGTGGCAGCACCGTATAGTGCCGACGAACTTGCGCAGAAAGGAGAGAG
CGCGGCTTTGATCGGGCAGTTGGAGAGGGAGCTCTCTTCGACGGTGTTCG
CATTGCGGGCGGAGAGGGAGAGCAAAATGGCTTCCGAGCACTTGCTGGCC
GACGCCCGTGATGCGGCTCGCCATCACCAGCACGCAGCGGACAGAAACTG
CCGCAGGCTCGAAGCCGCCAACCGCAGCCTGTCGGAGGAGATCCGGCAGC
TGCGGGCGAGCCGCGAGGAGAGAATCATGCCGGCACCAGCGCCTGCAGAG
GCGGCGGCAGCGGCGGCGAGGGCGGCGATGGCATCGGAGATGGCAGCAAC
GCGCTCTGCCCAAGACGCGGAGCGAGAGCGGGCGCGGGAGCGCGACAAGC
AGTGGATGGAGCGGGAGCTGGCGGCGGAGAAGGCGCGCTCCGACGGACTT
GCCGACGATGTCGCGGCGCTCCAGGCTGCTGTCCGCGCCGCCCGGCGGGA
GGCGGCGCCGGCAGCGGGCGGCAGCAAGCCACAGGCCGTGCGTCTCGTAT
CATCCGAGGTGGCGGCGGAGGCGCTCCGGTGGCGCCGCGAGTGCGACGGG
CTTCGCCGGCGGCTGACAGCCGCTGAGGAAGCCCGAGGACAGCTCCAGGC
AGCCTTTGAGGCGGAGAGGGTCCGGGCGGCGGCGCTGCAAGAAAAGGTCT
GCAAGTTGGAGGGCGAAGGCGACGCACACCGGGGAGGCGGCTACGGGATG
AATGGCTTCCTTCATCACCGCGAGAAAGCTGAAGCCGCGACGGCGGGGGC
GGGGGTGGCGGTTGCGGAGGCGATGGCGGCAGGAGCGGGCCTCAACGGGA
GCGGGGACTCTCCGTTCCGAAAACAGGCGGAGGCCCGCGGTGCGACGCGC
GATGCGCAGCGGCGGCTCGACGCCGAGCGCCACCTACGCGAAGACGCCGA
AGAGCAACTTCGTGTTTGCGGCCACAGTAACGGCGGCATCAGAGGCCGCG
ACAACGCTGCTGCAGCGGCCGCGGCAGCGACGGCGGGAGCG
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