mRNA_P-wetherbeei_contig6898.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6898.1.1
Unique NamemRNA_P-wetherbeei_contig6898.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A448ZRT4_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRT4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.920e-28
Identity = 68/133 (51.13%), Postives = 81/133 (60.90%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRR----KIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAAD--VELPDGGAAWYDLWEWRAPPLPPGRSATL 381
            VP  T+WKICHD+  GL  IH+HG+VH DIKPS+ FF    R     KIGD GLA + G  +GEG EGDTR++P ELL S  R   +D+FSLG   YEIA D  VE+P  G  W+ L     P LP  R   L
Sbjct: 1128 VPNLTVWKICHDISAGLSHIHSHGIVHQDIKPSNIFFVTNARFGAMCKIGDFGLAGSIGS-SGEGQEGDTRYMPPELLASATRHSSSDIFSLGLTLYEIAMDDHVEMPSEGPRWHQLRSSDEPKLPACRGDNL 1259          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A1E7FT77_9STRA (Kinase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FT77_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.400e-27
Identity = 63/133 (47.37%), Postives = 78/133 (58.65%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRR----KIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAA--DVELPDGGAAWYDLWEWRAPPLPPGRSATL 381
            VP  T WKICHD+  GL  IH+HG+VH DIKPS+ F     R     KIGD G+A + G  +G+G EGD R++P ELL S  R   +D+FSLG   YEIA   D+E+P  G  W+ L     P LP  R   L
Sbjct:  133 VPNMTAWKICHDISAGLSHIHSHGIVHQDIKPSNIFLVANARFGAMCKIGDFGMAGSIGS-SGDGQEGDARYMPPELLTSATRHTSSDIFSLGLTLYEIAMEEDIEMPSEGPHWHQLRSSNEPKLPSCRGDNL 264          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A6H5L0V5_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0V5_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 4.520e-25
Identity = 57/131 (43.51%), Postives = 79/131 (60.31%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSG-CDRRKIGDCGLAKAYGQPA---GEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVELPDGGAAWYDLWEWRAPPLPPGRSATL 381
            +PE+ +W++  D+ + L  +H  GLVHLD+KPS+        R K+ D G+A AYG+     G+G EGDT ++ +ELL S  RL  ADMFSLG   YE+A  +ELP  G  W+ + + RA  LP  RS  L
Sbjct: 1280 IPESAVWQVLQDIGQALSHVHAMGLVHLDVKPSNLLIGDEGGRLKLADFGMATAYGEGMEGIGDGQEGDTLYMAKELLSSTARLPSADMFSLGLTVYEVATRIELPGDGEDWHAMRDGRAVGLPSSRSRDL 1410          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: B8LBM9_THAPS (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBM9_THAPS)

HSP 1 Score: 104 bits (260), Expect = 1.040e-24
Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRR----KIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVE--LPDGGAAWYDLWEW-RAPPLPPGRSATL 381
            +PE  +W++CHD+  GL  IH+HG+VH DIKPS+ FF    R     KIGD GLA   G    +G EGDT ++P ELL +  +   AD+FSLG   YEIAA V+  +P  G  W++L      P +P  RS +L
Sbjct:  103 LPERAIWQVCHDISRGLFHIHSHGMVHYDIKPSNIFFVSNPRWGTICKIGDFGLAGDIGTKD-DGQEGDTAYMPNELLSTCVKHPGADIFSLGLTLYEIAASVDWTVPREGDRWHELRRGSHVPEIPTSRSDSL 235          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A7S2WPT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPT7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 5.770e-24
Identity = 59/134 (44.03%), Postives = 79/134 (58.96%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRR----KIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVE--LPDGGAAWYDLWEW-RAPPLPPGRSATL 381
            +PEAT+WKICHD+  GL  IH+HG+VH DIKP + FF    R     KIGD G+A   G    +G EGDT ++P+E+L S  +    D+FS G   YE+A+     LP  GA W+++      P LPP R+  L
Sbjct:  121 LPEATIWKICHDVSAGLSHIHSHGIVHHDIKPDNIFFVLHPRLGTLCKIGDFGMAGDIGTIE-DGQEGDTVYMPQEILSSAAKQPSGDIFSFGLTLYELASSKTWILPVEGARWHEIRSGSHVPELPPERNKYL 253          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A7S0KWY6_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KWY6_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.320e-23
Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRR----KIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAAD--VELPDGGAAWYDLWEWR-APPLPPGRSATL 381
            VP  T+WKICHD++ GL  IH+H +VH DIKPS+ FF    R     KIGD G+A   G    +G EGDT ++P ELL S  R   AD+FSLG   YE+++   ++LP  G+ W++L      P LP  RS  L
Sbjct:  564 VPTMTVWKICHDVLAGLSHIHSHNMVHHDIKPSNIFFVQHHRLGAMCKIGDFGMAGDVGTME-DGQEGDTIYMPLELLSSGRRHPSADIFSLGLTLYELSSSSCLDLPSEGSRWHELRSGEHVPKLPQCRSVEL 696          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A7S2U9G6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9G6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.690e-23
Identity = 62/134 (46.27%), Postives = 78/134 (58.21%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRR----KIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVEL--PDGGAAWYDLWEW-RAPPLPPGRSATL 381
            +PE T+WKICHDLV GL  IH+HG+VH DIKPS+ FF    R     KIGD G+A   G    +G EGDT ++P ELL S  +    DMFSLG   YE+A++ +   P  G  W+ +      P LP GR   L
Sbjct:  937 LPEPTVWKICHDLVAGLSYIHSHGMVHHDIKPSNIFFIPHSRLGVMCKIGDFGMAGDIGVVE-DGQEGDTTYMPSELLSSASKHTSNDMFSLGLTLYELASNPKWTPPIEGVKWHAIRSGSHIPELPTGRCKQL 1069          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A6A4A4I7_9STRA (Protein kinase domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A4I7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.110e-22
Identity = 53/132 (40.15%), Postives = 75/132 (56.82%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRRKIGDCGLAKAYGQPAGEGN-----EGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVELPDGGAAWYDLWEWRAPPLPPGRSATL 381
            +PE  +W I  D+  GL  +H+H +VHLD+KP + F +   R KIGD G+A      +G  +     EGD +++ +ELL S +RL  AD+F LG +  EI   V LP+ G  W+D+ E   PP PP  S  L
Sbjct:  286 LPEKYVWVIMRDVTSGLKVLHDHDIVHLDVKPDNIFITEDGRLKIGDFGMAGKVVTSSGTSSQIGDLEGDAKYMAKELLSSADRLPSADIFCLGIMMLEIVTGVTLPEAGKEWHDIREGILPPFPPEYSYDL 417          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: UPI001BB22599 (membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase-like n=2 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB22599)

HSP 1 Score: 97.4 bits (241), Expect = 4.400e-21
Identity = 50/118 (42.37%), Postives = 72/118 (61.02%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRRKIGDCGLAKAYGQ-PAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVELPDGGAAWYDLWEWRAP 351
            +PE  LW    DL++GLH +H+HGL+HLD+KP + F S     K+GD GL+    +    +  EGD ++L  ELL     +  AD+FSLG   +E+A+D+ELP  G +W+DL   R P
Sbjct:  197 IPERILWSFLVDLIQGLHHMHSHGLLHLDVKPENIFISFGKVCKLGDFGLSVQMNEHDFTDAQEGDPKYLAPELLQGHFGMH-ADVFSLGITIFELASDLELPRNGDSWHDLRRGRIP 313          
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Match: A0A4P9X9Q8_9FUNG (Protein kinase domain-containing protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9X9Q8_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 1.200e-20
Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    1 VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRRKIGDCGLAKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVELPDGGAAWYDL 333
            VPE T+W    +L   L  +H  G+VHLD+KP++ F +G    K+GD GLA+   +P+    EGD R++  ELL+       AD+FSLG +  E+AA+VELP+ G AW  L
Sbjct:   19 VPELTVWTTLTELTATLAGLHALGVVHLDLKPANVFITGDGALKLGDFGLARFLDRPSHSDVEGDRRYMAPELLEGRVSFA-ADIFSLGLMALEMAANVELPENGPAWTQL 128          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6898.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A448ZRT4_9STRA1.920e-2851.13Protein kinase domain-containing protein n=1 Tax=P... [more]
A0A1E7FT77_9STRA3.400e-2747.37Kinase-like protein n=1 Tax=Fragilariopsis cylindr... [more]
A0A6H5L0V5_9PHAE4.520e-2543.51Protein kinase domain-containing protein n=2 Tax=E... [more]
B8LBM9_THAPS1.040e-2444.78Protein kinase domain-containing protein (Fragment... [more]
A0A7S2WPT7_9STRA5.770e-2444.03Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S0KWY6_9STRA1.320e-2345.52Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A7S2U9G6_9STRA4.690e-2346.27Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6A4A4I7_9STRA1.110e-2240.15Protein kinase domain-containing protein n=5 Tax=P... [more]
UPI001BB225994.400e-2142.37membrane-associated tyrosine- and threonine-specif... [more]
A0A4P9X9Q8_9FUNG1.200e-2043.24Protein kinase domain-containing protein (Fragment... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6898contigP-wetherbeei_contig6898:2375..2755 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FKY7
PFAMsPkinase,Ribosomal_L26
Model size381
Max annot lvl2759|Eukaryota
KEGG koko:K06633
KEGG Pathwayko04110,ko04114,ko04914,map04110,map04114,map04914
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.87e-25
EggNOG OGsKOG0601@1|root,KOG0601@2759|Eukaryota
EC2.7.11.1
Descriptionprotein kinase activity
Cds size381
COG categoryT
BRITEko00000,ko00001,ko01000,ko01001,ko01009
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186944.282378-CDS-P-wetherbeei_contig6898:2374..27551683186944.282378-CDS-P-wetherbeei_contig6898:2374..2755Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6898 2375..2755 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6898.1.1prot_P-wetherbeei_contig6898.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6898 2375..2755 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6898.1.1

>prot_P-wetherbeei_contig6898.1.1 ID=prot_P-wetherbeei_contig6898.1.1|Name=mRNA_P-wetherbeei_contig6898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=127bp
VPEATLWKICHDLVEGLHRIHNHGLVHLDIKPSSTFFSGCDRRKIGDCGL
AKAYGQPAGEGNEGDTRFLPRELLDSDERLQLADMFSLGTVRYEIAADVE
LPDGGAAWYDLWEWRAPPLPPGRSATL
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mRNA from alignment at P-wetherbeei_contig6898:2375..2755-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6898.1.1 ID=mRNA_P-wetherbeei_contig6898.1.1|Name=mRNA_P-wetherbeei_contig6898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig6898:2375..2755- (Phaeothamnion wetherbeei SAG_119_79)
GTGCCGGAGGCGACGCTGTGGAAGATCTGCCACGACCTTGTGGAGGGGCT GCACCGCATCCACAACCACGGGCTCGTGCACCTCGACATCAAGCCCAGCA GCACCTTCTTCTCGGGCTGCGACCGCCGCAAGATCGGCGACTGCGGGTTG GCGAAGGCCTACGGTCAGCCCGCCGGCGAAGGCAATGAGGGCGACACGCG CTTCCTGCCGCGGGAGCTGCTCGACTCGGACGAGCGGCTGCAGCTGGCTG ATATGTTCTCGCTGGGCACCGTGCGCTACGAGATCGCGGCGGACGTAGAG CTGCCTGATGGCGGCGCGGCGTGGTACGACTTGTGGGAGTGGCGGGCGCC GCCGCTGCCGCCGGGGCGGTCGGCGACCCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6898:2375..2755-

>mRNA_P-wetherbeei_contig6898.1.1 ID=mRNA_P-wetherbeei_contig6898.1.1|Name=mRNA_P-wetherbeei_contig6898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=381bp|location=Sequence derived from alignment at P-wetherbeei_contig6898:2375..2755- (Phaeothamnion wetherbeei SAG_119_79)
GTGCCGGAGGCGACGCTGTGGAAGATCTGCCACGACCTTGTGGAGGGGCT
GCACCGCATCCACAACCACGGGCTCGTGCACCTCGACATCAAGCCCAGCA
GCACCTTCTTCTCGGGCTGCGACCGCCGCAAGATCGGCGACTGCGGGTTG
GCGAAGGCCTACGGTCAGCCCGCCGGCGAAGGCAATGAGGGCGACACGCG
CTTCCTGCCGCGGGAGCTGCTCGACTCGGACGAGCGGCTGCAGCTGGCTG
ATATGTTCTCGCTGGGCACCGTGCGCTACGAGATCGCGGCGGACGTAGAG
CTGCCTGATGGCGGCGCGGCGTGGTACGACTTGTGGGAGTGGCGGGCGCC
GCCGCTGCCGCCGGGGCGGTCGGCGACCCTC
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