mRNA_P-wetherbeei_contig6894.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: UPI0019A47798 (Uncharacterized protein n=1 Tax=Undibacterium sp. TaxID=1914977 RepID=UPI0019A47798) HSP 1 Score: 335 bits (860), Expect = 5.790e-113 Identity = 171/269 (63.57%), Postives = 191/269 (71.00%), Query Frame = 1
Query: 28 RPLWLFATLWSLRQYPTLAREWGWARKFAAIRAAGFTGVFSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALFAHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQA 834
RPL L+A+LW+LRQYPT AREW W +KFAAIRAAGF GVFSPP P LA RG LRYLAVTSL A A +A ALGA AIDVQL D++TPLR A+A+ + + + LP+AIETHRDTFTETPEAT AL R + T LPLCLDHSHFAVVRHLAP W RLREPAALL AA QFHLRPFNGHH Q+P L RTPEY+ WL YAAAL AH P+ +V ELGHAAPAY L+ F DTW D + DLR WR A
Sbjct: 5 RPLHLYASLWTLRQYPTRAREWTWEKKFAAIRAAGFDGVFSPPIPALASRGPLRYLAVTSLGVAADCAAPFAAARALGAEAIDVQLCDHDTPLRAALAVVKKIRAASLAHHLPFAIETHRDTFTETPEATLALARAYRAATGATLPLCLDHSHFAVVRHLAPDQLWPRLREPAALLAAAAQFHLRPFNGHHAQLPALTPAGHRTPEYRHWLDYAAALLAHERARPTIAPLPIVVELGHAAPAYRLASFPDTWRDARAVAADLRRLWRAA 273
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A1H1SL56_9BACT (Uncharacterized protein n=1 Tax=Opitutus sp. GAS368 TaxID=1882749 RepID=A0A1H1SL56_9BACT) HSP 1 Score: 326 bits (836), Expect = 5.060e-109 Identity = 166/279 (59.50%), Postives = 193/279 (69.18%), Query Frame = 1
Query: 10 STSAAARPLWLFATLWSLRQYPTLAREWGWARKFAAIRAAGFTGVFSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALFAHLA-RENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQAQAR 843
S++ +R L LFA+LWSLRQYP+ +REW W +KFAAIR AGF GVFSPP PE+ ER L YLAVTS + +A LGA+ + VQL Y+TPL A+ A+ V AR + LP+AIETHR T TETPE T AL R + R T LPLCLDHSHFAVVRHLAP W RL PAALLRAATQFHLRPFNGHHCQ+P LD RRTPEY+DWL YAAAL AH R P++VV E+GHA PAY LS F DTW D + + DLR WR+ + R
Sbjct: 15 SSAGRSRRLLLFASLWSLRQYPSKSREWSWTKKFAAIRDAGFDGVFSPPIPEMGERAGLLYLAVTSAGGRTRWAPTFAAARRLGAVGLCVQLCGYDTPLPAALKAAQKVRRAARRVHLPFAIETHRGTCTETPETTLALARTYRRATGENLPLCLDHSHFAVVRHLAPTELWTRLARPAALLRAATQFHLRPFNGHHCQLPALDAAGRRTPEYRDWLRYAAALLAHERDRPTSAGPLMVVAEVGHAVPAYRLSGFPDTWRDTVKVAADLRRLWRRGRVR 293
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A3C1VFS6_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A3C1VFS6_9BACT) HSP 1 Score: 308 bits (790), Expect = 1.820e-102 Identity = 154/233 (66.09%), Postives = 170/233 (72.96%), Query Frame = 1
Query: 127 AGFTGVFSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALFAHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCW 825
AGF GVFSPP P L ERG+LRYLAVTSLD PA+V L +A LGAL IDV LG+Y T AV LA + DVAR L LP+AIETHR TFTETPE T LC + R T LPLCLDHSHFA+VRHLAP FWDRLREP +LLRAA Q HLRPFNGHHCQIPVL RRTPEY WL YA L AH+ ++ +PVLVVPE+GHAAP Y LSCF DTW D++ L DLR W
Sbjct: 2 AGFDGVFSPPLPVLRERGNLRYLAVTSLDAPAKVTPVLSAAKKLGALGIDVLLGNYKTTPADAVTLAVRIRDVARALALPFAIETHRGTFTETPETTLKLCEGYRRMTGEMLPLCLDHSHFAIVRHLAPP-FWDRLREPPSLLRAAMQLHLRPFNGHHCQIPVLTSAGRRTPEYHAWLDYAKLLLAHMRAQSSPDPVLVVPEIGHAAPEYRLSCFPDTWRDVIALKSDLRRLW 233
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A7K1BW93_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K1BW93_9ACTN) HSP 1 Score: 242 bits (618), Expect = 2.070e-77 Identity = 123/187 (65.78%), Postives = 140/187 (74.87%), Query Frame = 1
Query: 13 TSAAARPLWLFATLWSLRQYPTLAREWGWARKFAAIRAAGFTGVFSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQF 573
T+ + R L LFATLWSLRQYP+ REW WA+KFAAIRAAGF GVFSPP P +A+RG L YLAVTSL + +A LGA+A+DVQL DY+TPL AVA+A+ + AR GLP+AIETHRDTFTETPEAT AL R + ET + LPLCLDHSHFAVVRHL PG W RLREP LLRAA QF
Sbjct: 8 TTPSKRSLHLFATLWSLRQYPSAEREWPWAKKFAAIRAAGFDGVFSPPIPAIADRGALHYLAVTSLGEKSDCTLPFAAARDLGAVAMDVQLCDYDTPLPEAVAVAKRISAAARAHGLPFAIETHRDTFTETPEATLALARAYRAETGKTLPLCLDHSHFAVVRHLRPGQLWARLREPKPLLRAAVQF 194
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A2E4IYX6_9BACT (Uncharacterized protein n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E4IYX6_9BACT) HSP 1 Score: 243 bits (621), Expect = 8.770e-77 Identity = 125/261 (47.89%), Postives = 158/261 (60.54%), Query Frame = 1
Query: 43 FATLWSLRQYPTLAREWGWARKFAAIRAAGFTGVFSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALFAHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCW 825
+AT WSLR+YP+ EW W RKF AIR AGFTG+ SPPR EL+ G+L Y A+ SL A ++ ALGA +Q D +TPL AV + A++ +P IE HRDTFTETPE AL F +T +P+C DHSHF VVRH A +WD+L E +L+ +FH+RP NGHHCQIP ++RTPEY+ W YA +L + E + +VPELG+AAPAYGLSCF D W D + DLR W
Sbjct: 9 YATAWSLREYPSKEAEWSWDRKFDAIREAGFTGIMSPPREELSGGGNLDYWAMGSLGVGDDYAAYFEAVKALGATHATIQPCDVDTPLGDAVDAIIGIVAAAKKADVPVTIECHRDTFTETPEKMWALYDGFRAKTGELMPVCFDHSHFVVVRHYA-APYWDKLNERPDVLKDCPRFHMRPCNGHHCQIPATFDGEKRTPEYELWSDYAKSLMQFIKVEGTVIDIHMVPELGNAAPAYGLSCFPDVWEDAKIIGADLRRWW 268
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A2Z4ACY4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Moanabacter tarae TaxID=2200854 RepID=A0A2Z4ACY4_9BACT) HSP 1 Score: 197 bits (500), Expect = 2.220e-58 Identity = 110/270 (40.74%), Postives = 155/270 (57.41%), Query Frame = 1
Query: 55 WSLRQYPTLAREWGWARKFAAIRAAGFT---GVFSPPRPELAE-RGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALF-AHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQAQARST 849
W L YP++ REW RK + ++ AGF G S P A R + LA + +++ L S G+ I++Q GD++T RAV + V + +LG+ IE HRDT TETPE + A+ + RET + LP+C DHSHFAVV+HL P + +RL L++ + QFH+RPFNGHHCQ+PV + + R +PE+KDW+ Y A+F LA + VVPELG YGLSCF D ++DL R++ W +A R+T
Sbjct: 14 WPLTGYPSVKREWSIDRKVSELKVAGFNAFGGRLSTPGVLAASMRHKMPILAYEDIGGIKEIRPKLTSIAEAGSPMINIQPGDHDTRTERAVRIVVAVMRESEKLGINSHIEIHRDTATETPEKSFAIIDGYKRETGKDLPVCWDHSHFAVVKHLNPDNYVERLVVRRKLIQLSRQFHMRPFNGHHCQVPVTNGKGRLSPEFKDWISYVDAMFDCWLAGPRPGNSLWVVPELG-PPNGYGLSCFPDVFNDLKVCRREVLKSWNRALRRTT 282
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: B9XQ04_PEDPL (Uncharacterized protein n=1 Tax=Pedosphaera parvula (strain Ellin514) TaxID=320771 RepID=B9XQ04_PEDPL) HSP 1 Score: 195 bits (496), Expect = 1.020e-57 Identity = 105/265 (39.62%), Postives = 149/265 (56.23%), Query Frame = 1
Query: 52 LWSLRQYPTLAREWGWARKFAAIRAAGFTG---VFSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALF-AHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQA 834
LW+L YP+ REW RK A++ AGF G + +P +L ++ DL + + P + LK GA I+VQL D++T + AV LA+ + R LG+ AIE HRDT TETPE T AL + + T + LP+ DHSH A+V+HL P +W+RL L++ A QFH RPFNGHHCQ+PV + R + TPE D+L + + L N ++VVPE+G Y L ++W D + L ++ CWR+A
Sbjct: 14 LWTLVWYPSKKREWSLERKLKAVKEAGFDGFTSLLTPEHKKLGDKYDLMRVGYFASGNPEEFGKLLKQNKDAGAHHINVQLADHDTLAKVAVQLAKKLMAEGRRLGVEPAIEVHRDTCTETPEKTYALAEGYEKATGQLLPMTWDHSHLAIVKHLLPP-YWERLNRRPDLIQRAQQFHFRPFNGHHCQVPVTNGRGKLTPEVLDYLPFVEKVMETWLETANPGREMIVVPEMGPLWLGYNLHSLPNSWEDAIILRSEIEKCWRRA 277
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: UPI001988AC97 (Xylose isomerase n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=UPI001988AC97) HSP 1 Score: 190 bits (483), Expect = 9.130e-56 Identity = 105/269 (39.03%), Postives = 149/269 (55.39%), Query Frame = 1
Query: 46 ATLWSLRQYPTLAREWGWARKFAAIRAAGFTGVFSPPRPE---LAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAA-ALFAHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQAQA 840
A LWSL ++P+ +EW +K ++AAGF G + P E LA + L + S +P++ + + GAL I+VQLGD++TP+ +AVA+A + ++ LG P IE HRDT TETPE A+ F + T R LP+ D SH +VV+HLAP +W+RL L++ A QFH RPFNGHHCQIPV D R +PE WL + + LA + + V PE+G Y L+ +W D L + W++A A
Sbjct: 15 AALWSLVEHPSAKQEWSLEKKIGDLKAAGFDGFATQPDKEHTRLAAKHGLSIVGYISSSKPSEFRPLILKNRDGGALRINVQLGDHDTPVEKAVAMAVRIVELGDSLGCPCDIEVHRDTCTETPEKAYAIAAGFKKATGRLLPMTWDFSHLSVVKHLAPP-YWERLLVAPKLVQHARQFHFRPFNGHHCQIPVTDGTGRISPELTQWLPFLEKTITLILAGKQDGRDIFVCPEMGPVPGGYNLAQLPSSWEDAKVLRGIIDQTWKKALA 282
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A7Y4QPG3_9BACT (Sugar phosphate isomerase/epimerase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7Y4QPG3_9BACT) HSP 1 Score: 191 bits (484), Expect = 9.650e-56 Identity = 108/265 (40.75%), Postives = 147/265 (55.47%), Query Frame = 1
Query: 52 LWSLRQYPTLAREWGWARKFAAIRAAGFTGV---FSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALF-AHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQA 834
LW+L +PT AREW RK A++ AGF G +P +LA++ L + + P + + L+S GAL ++VQLGD++TP A+ LAR + ++LGL A+E HRDT TETPE T AL + + T LP+ D+SH AVV+HL FW RL L++ A QFHLRPFNGHHCQIPV D R TPE+ D++ + + LA + + VPELG Y L F +W D L + W +A
Sbjct: 16 LWTLVWHPTQAREWTLERKLRAVKDAGFDGFTTQLTPKHAKLADQLGLMRVGYFASSNPREFASLLRSQKEAGALHVNVQLGDHDTPTPVAIRLARKLIAEGKKLGLEVAVEVHRDTCTETPEKTYALADGYEKATGELLPMTWDYSHIAVVKHLL-APFWPRLGVRPDLIQHAQQFHLRPFNGHHCQIPVTDGRGHLTPEFLDYVPFMDQVMETWLAAASPGREFIAVPELGPLKIGYRLHSFPSSWEDAKVLRGQIEKSWCRA 279
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Match: A0A1H1Q7A3_9BACT (Uncharacterized protein n=2 Tax=Opitutus sp. GAS368 TaxID=1882749 RepID=A0A1H1Q7A3_9BACT) HSP 1 Score: 189 bits (479), Expect = 4.700e-55 Identity = 107/274 (39.05%), Postives = 148/274 (54.01%), Query Frame = 1
Query: 34 LWLFATLWSLRQYPTLAREWGWARKFAAIRAAGFTGV---FSPPRPELAERGDLRYLAVTSLDRPAQVKAALKSATALGALAIDVQLGDYNTPLRRAVALARCVDDVARELGLPYAIETHRDTFTETPEATTALCREFHRETRRRLPLCLDHSHFAVVRHLAPGAFWDRLREPAALLRAATQFHLRPFNGHHCQIPVLDRRQRRTPEYKDWLGYAAALF-AHLARENRREPVLVVPELGHAAPAYGLSCFGDTWSDLLTLHRDLRTCWRQAQAR 843
L + A LW+L +P+ REW RKFAAI+ AGF G ELA + L + S P + ++ GA I+VQLG+++TP+ ++ +A + + G+P IE HRDT TETPE T A+ + R T R LP+ D SHFAVV+HLAP +WDRL E L+R A QFH RPFNGHHCQ+PV D + + E + WL L L + + PE+G Y L+ D+WS+ L ++ W +A+AR
Sbjct: 9 LQIIANLWTLWDHPSAQREWSLERKFAAIKEAGFDGFTWQLDREHGELARKHGLLAIGFVSSANPGEFAGLIRQNVDGGARRINVQLGNHDTPVPESIDMAIRFLEEGEKQGVPCDIEVHRDTCTETPEKTYAIAAGYQRATGRLLPITWDFSHFAVVKHLAPP-YWDRLIESPELIRHARQFHFRPFNGHHCQVPVTDGTGKLSLELQQWLPALEKLVETWLEGDQSGAELYACPEMGPLRGGYNLAQLPDSWSEAKILRGLIKDTWEKAEAR 281 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6894.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6894.3.1 >prot_P-wetherbeei_contig6894.3.1 ID=prot_P-wetherbeei_contig6894.3.1|Name=mRNA_P-wetherbeei_contig6894.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=283bp MPPSTSAAARPLWLFATLWSLRQYPTLAREWGWARKFAAIRAAGFTGVFSback to top mRNA from alignment at P-wetherbeei_contig6894:2368..3216- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6894.3.1 ID=mRNA_P-wetherbeei_contig6894.3.1|Name=mRNA_P-wetherbeei_contig6894.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig6894:2368..3216- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6894:2368..3216- >mRNA_P-wetherbeei_contig6894.3.1 ID=mRNA_P-wetherbeei_contig6894.3.1|Name=mRNA_P-wetherbeei_contig6894.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=849bp|location=Sequence derived from alignment at P-wetherbeei_contig6894:2368..3216- (Phaeothamnion wetherbeei SAG_119_79)back to top |