mRNA_P-wetherbeei_contig6888.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6888.1.1
Unique NamemRNA_P-wetherbeei_contig6888.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6888.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6888contigP-wetherbeei_contig6888:1503..3267 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog5551.XP_003230862.1
PFAMsZn_clus
Model size1751
Max annot lvl4751|Fungi
KEGG koko:K21546
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.8e-06
EggNOG OGs2EPHI@1|root,2SSPP@2759|Eukaryota,3ADWM@33154|Opisthokonta,3P8QN@4751|Fungi,3QZ8H@4890|Ascomycota,20MNE@147545|Eurotiomycetes,3B8YS@33183|Onygenales,3FWVV@34384|Arthrodermataceae
DescriptionC6 transcription factor
Cds size1098
COG categoryK
BRITEko00000,ko03000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186943.6572676-UTR-P-wetherbeei_contig6888:1502..15761683186943.6572676-UTR-P-wetherbeei_contig6888:1502..1576Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6888 1503..1576 -
1683186943.6778991-UTR-P-wetherbeei_contig6888:2674..31801683186943.6778991-UTR-P-wetherbeei_contig6888:2674..3180Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6888 2675..3180 -
1683186943.6873915-UTR-P-wetherbeei_contig6888:3194..32671683186943.6873915-UTR-P-wetherbeei_contig6888:3194..3267Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6888 3195..3267 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186943.66852-CDS-P-wetherbeei_contig6888:1576..26741683186943.66852-CDS-P-wetherbeei_contig6888:1576..2674Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6888 1577..2674 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6888.1.1prot_P-wetherbeei_contig6888.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6888 1577..2674 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6888.1.1

>prot_P-wetherbeei_contig6888.1.1 ID=prot_P-wetherbeei_contig6888.1.1|Name=mRNA_P-wetherbeei_contig6888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=366bp
MEDRQGPPEPPLPPPPPEPAERNSQLHQQRYAGREEAPELPLLRLQTGEL
PVLARQMPAPLPAHESRARRLLTPPPQSAGAAVASIAAAGGVAGASGNSG
PASAARGSSEGGGSRPPPSARRARVVTETSGVLRRSCDGCHQLKKKCSGK
QPCRGCARRGVPCEYSFAHKRGRPRRSLVGAGGAAAAGAAAVAGAIGASR
VKRPSPPPLSQSELQRRGRDQASKDGTTQRGRPPRESIPSDSMDEDGSDA
SRGDGCSSIGDRGSGGGGSGGTSGSGGSHFRGDGNGGGGKGGKGGSSDGG
NSTVAGGQARGSGAGGAGVQAWSDADSEWANDGDTDSESKWRERRGGTVE
TRLRDAIRNERAACK*
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mRNA from alignment at P-wetherbeei_contig6888:1503..3267-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6888.1.1 ID=mRNA_P-wetherbeei_contig6888.1.1|Name=mRNA_P-wetherbeei_contig6888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1765bp|location=Sequence derived from alignment at P-wetherbeei_contig6888:1503..3267- (Phaeothamnion wetherbeei SAG_119_79)
AGCAGCAGTGGCACCAGCTGTGGCAGCAGCAGCTGCTGCGGGGGCAGCAG
CGGGGGTGGGCGCTGCCGCGGCCGCCGCTGCCGCCAGCGGAGCCAGTGGA
ACCGGGGGATCACCGGCTGTGGCGGGAGCGGCGGCAGGCAGCACAAGACC
TTCTCTGGCACCTGCAGTGCCAGCAGCCGCTACCGGCGCCGCCGCGGCCT
GAATCGCAGCGACTGCTGCAGCCATCGTCTGAACAACGGCGTCTGCTGCA
CGAACGACAATGGTGGGAGGAGCAGCAGCAGGAGGGGCGGTGGCGGCAGC
AGCGTGGGGAGGAGGATGGGCGCTGGGAGAGGTCACCGTCGCGACCGCTG
CTCGCGGCGGCGGAAACGACGGTGCAGGACGATCATTGGTGGCAGCAGCG
GCAGGAGCGACAAAAGGCGGCACAGGGACCGCTGTGGCACGTTTCACGCC
AGGAGCAGCACTTGCCGGAGCCGCCGCCACCGCGTGAGCCGCCGCGCAAC
CGGACGCAGCTGGCGTTGGAGTCGAAGCCGCTGTCTCAGCAATGGCGACC
GCATCAACTGCAGCAGGCGACGTCCGAGCGGCAGCCGTGGCAAATGGAGG
ACCGGCAGGGGCCGCCTGAACCCCCACTCCCGCCGCCGCCGCCGGAACCG
GCGGAGCGGAATAGCCAGCTGCACCAGCAGCGGTACGCCGGACGAGAGGA
AGCGCCGGAATTGCCTCTCTTGCGCCTTCAGACCGGGGAGCTGCCTGTGC
TGGCTCGGCAAATGCCGGCTCCGCTACCAGCGCATGAGTCGCGGGCGCGG
CGGCTGCTGACTCCTCCGCCGCAAAGCGCCGGCGCCGCCGTCGCCAGCAT
TGCTGCCGCTGGCGGCGTCGCTGGCGCCAGTGGCAATAGCGGCCCGGCCT
CAGCAGCTCGGGGCAGCAGCGAGGGAGGGGGCAGCAGGCCACCGCCGTCC
GCCCGCCGTGCCCGCGTTGTCACGGAGACGAGCGGGGTGCTCCGCCGCAG
CTGCGACGGCTGCCACCAGCTCAAGAAGAAGTGCAGCGGCAAGCAGCCCT
GCCGTGGCTGCGCCCGGCGCGGCGTCCCGTGCGAGTACAGCTTCGCGCAC
AAGCGCGGCCGACCGAGGAGATCCCTCGTTGGCGCCGGCGGCGCCGCTGC
CGCCGGCGCCGCCGCAGTCGCAGGCGCCATCGGTGCAAGTCGGGTGAAGC
GGCCGTCGCCGCCGCCGCTGTCGCAGTCTGAGTTGCAGCGGCGGGGGCGG
GATCAGGCGTCGAAAGACGGGACAACACAGAGGGGAAGGCCGCCGAGGGA
ATCGATTCCGTCGGACAGCATGGACGAAGATGGCAGCGATGCAAGTCGCG
GCGACGGCTGCAGCAGCATCGGGGACCGGGGCAGTGGCGGCGGCGGCAGC
GGCGGCACGAGCGGCAGCGGCGGCAGCCATTTCCGAGGCGACGGCAACGG
CGGCGGCGGTAAGGGCGGCAAGGGCGGCAGCAGCGACGGCGGCAACAGTA
CCGTTGCCGGTGGCCAGGCCCGGGGGAGCGGCGCCGGAGGCGCCGGCGTC
CAAGCGTGGAGCGACGCTGATTCGGAATGGGCTAATGACGGCGACACGGA
CAGTGAATCAAAATGGCGGGAACGGAGGGGAGGGACCGTTGAAACCCGGC
TTCGGGATGCGATTAGGAACGAACGGGCTGCCTGCAAATGAAACGAAATG
AAACGAAATGGCCCTTACTGGTCGAGGTTAAGAGATGGCGGGAAAGAATA
AATTACAAGATTTTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6888:1503..3267-

>mRNA_P-wetherbeei_contig6888.1.1 ID=mRNA_P-wetherbeei_contig6888.1.1|Name=mRNA_P-wetherbeei_contig6888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1098bp|location=Sequence derived from alignment at P-wetherbeei_contig6888:1503..3267- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGACCGGCAGGGGCCGCCTGAACCCCCACTCCCGCCGCCGCCGCC
GGAACCGGCGGAGCGGAATAGCCAGCTGCACCAGCAGCGGTACGCCGGAC
GAGAGGAAGCGCCGGAATTGCCTCTCTTGCGCCTTCAGACCGGGGAGCTG
CCTGTGCTGGCTCGGCAAATGCCGGCTCCGCTACCAGCGCATGAGTCGCG
GGCGCGGCGGCTGCTGACTCCTCCGCCGCAAAGCGCCGGCGCCGCCGTCG
CCAGCATTGCTGCCGCTGGCGGCGTCGCTGGCGCCAGTGGCAATAGCGGC
CCGGCCTCAGCAGCTCGGGGCAGCAGCGAGGGAGGGGGCAGCAGGCCACC
GCCGTCCGCCCGCCGTGCCCGCGTTGTCACGGAGACGAGCGGGGTGCTCC
GCCGCAGCTGCGACGGCTGCCACCAGCTCAAGAAGAAGTGCAGCGGCAAG
CAGCCCTGCCGTGGCTGCGCCCGGCGCGGCGTCCCGTGCGAGTACAGCTT
CGCGCACAAGCGCGGCCGACCGAGGAGATCCCTCGTTGGCGCCGGCGGCG
CCGCTGCCGCCGGCGCCGCCGCAGTCGCAGGCGCCATCGGTGCAAGTCGG
GTGAAGCGGCCGTCGCCGCCGCCGCTGTCGCAGTCTGAGTTGCAGCGGCG
GGGGCGGGATCAGGCGTCGAAAGACGGGACAACACAGAGGGGAAGGCCGC
CGAGGGAATCGATTCCGTCGGACAGCATGGACGAAGATGGCAGCGATGCA
AGTCGCGGCGACGGCTGCAGCAGCATCGGGGACCGGGGCAGTGGCGGCGG
CGGCAGCGGCGGCACGAGCGGCAGCGGCGGCAGCCATTTCCGAGGCGACG
GCAACGGCGGCGGCGGTAAGGGCGGCAAGGGCGGCAGCAGCGACGGCGGC
AACAGTACCGTTGCCGGTGGCCAGGCCCGGGGGAGCGGCGCCGGAGGCGC
CGGCGTCCAAGCGTGGAGCGACGCTGATTCGGAATGGGCTAATGACGGCG
ACACGGACAGTGAATCAAAATGGCGGGAACGGAGGGGAGGGACCGTTGAA
ACCCGGCTTCGGGATGCGATTAGGAACGAACGGGCTGCCTGCAAATGA
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