prot_P-wetherbeei_contig6887.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6887.1.2
Unique Nameprot_P-wetherbeei_contig6887.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length450
Homology
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: D8LJK6_ECTSI (CID domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK6_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.320e-23
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    5 AKSLLRALNTCCASGPKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGRKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVFGPLPAY 130
            A S+ +AL     S    SAS+V+ A   AL   K+YKR VH IE +IRKA+P+H++ GC+V+D+V + +  K+G KDVF PRFAQRM+ ET+  L        P + RV+REW +K +F  L A+
Sbjct:    9 AASMHKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAQSKWGHKDVFTPRFAQRMS-ETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAF 133          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A6H5JF85_9PHAE (CID domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF85_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 5.790e-21
Identity = 55/121 (45.45%), Postives = 77/121 (63.64%), Query Frame = 0
Query:   10 RALNTCCASGPKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGRKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVFGPLPAY 130
            +AL     S    SAS+V+ A   AL   K+YKR VH IE +IRKA+P+H++ GC+V+D+V + +  K+G KDVF PRFAQRM+ ET+  L        P + RV+REW +K +F  L A+
Sbjct:   14 KALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIGGCFVIDSVCRQAHSKWGHKDVFTPRFAQRMS-ETVENLRNVPDGDKPPVFRVIREWHEKGMFKGLEAF 133          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A7G3AYH6_LUTLO (Putative rna polymerase ii c-terminal domain-binding protein ra4 n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A7G3AYH6_LUTLO)

HSP 1 Score: 80.1 bits (196), Expect = 3.290e-12
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 0
Query:   20 PKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYG-RKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVFGP 126
            P  S +K+   T+ A++  K YK  V  +E FI K +PE+K+ G YV+DA+V+ S H++G  KDVFAPRFAQ M  +T   L          I RV+  W    VF P
Sbjct:   19 PPISKAKMGAITRAAMKAIKFYKHVVQSVEKFILKCKPEYKVPGLYVIDAIVRQSRHQFGPEKDVFAPRFAQNMQ-QTFSNLFRCTPEDKSKIVRVLNLWLKNNVFSP 125          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A6B2EH07_9DIPT (Putative rna polymerase ii c-terminal domain-binding protein ra4 n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EH07_9DIPT)

HSP 1 Score: 79.0 bits (193), Expect = 7.510e-12
Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 0
Query:   20 PKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYG-RKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVFGP 126
            P  S +K+   T+ A++  K YK  V  +E FI K +PE+K+ G YV+DA+V+ S H++G  KDVFAPRFAQ M  +T   L          I RV+  W    VF P
Sbjct:   19 PPISKAKMGSITRGAMKAIKFYKHVVQSVEKFILKCKPEYKVPGLYVIDAIVRQSRHQFGPEKDVFAPRFAQNMQ-QTFANLFRCAPEDKSKIIRVLNLWLKNNVFSP 125          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A671M7F3_9TELE (Splicing factor, arginine/serine-rich 15-like n=3 Tax=Cyprininae TaxID=2743694 RepID=A0A671M7F3_9TELE)

HSP 1 Score: 70.5 bits (171), Expect = 2.940e-9
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 0
Query:   20 PKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGR-KDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVF 124
            P  S +K+   TK  ++  K YK  V ++E FI++ +P+ K+ G YVVD++++ S H++G+ KDVF PRF +   T T   L          I RV+  W    VF
Sbjct:   21 PPISRAKMMSVTKAGIKAIKLYKHVVQIVEKFIKRCKPDLKVAGLYVVDSIIRQSRHQFGKDKDVFGPRFLKNF-TVTFQNLFQCPADDKGKILRVLNLWEKNDVF 125          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A671M7Q4_9TELE (Splicing factor, arginine/serine-rich 15-like n=10 Tax=Cyprininae TaxID=2743694 RepID=A0A671M7Q4_9TELE)

HSP 1 Score: 70.5 bits (171), Expect = 3.260e-9
Identity = 38/106 (35.85%), Postives = 58/106 (54.72%), Query Frame = 0
Query:   20 PKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGR-KDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVF 124
            P  S +K+   TK  ++  K YK  V ++E FI++ +P+ K+ G YVVD++++ S H++G+ KDVF PRF +   T T   L          I RV+  W    VF
Sbjct:   21 PPISRAKMMSVTKAGIKAIKLYKHVVQIVEKFIKRCKPDLKVAGLYVVDSIIRQSRHQFGKDKDVFGPRFLKNF-TVTFQNLFQCPADDKGKILRVLNLWEKNDVF 125          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A177B9V9_9BILA (CID domain-containing protein n=1 Tax=Intoshia linei TaxID=1819745 RepID=A0A177B9V9_9BILA)

HSP 1 Score: 69.3 bits (168), Expect = 7.340e-9
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 0
Query:    9 LRALNTCCASGPKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGR-KDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREW 118
            LR+L++      K S +K+   TK+  +  K YK AV  +E FI KAR + KL G Y++D++V+ S H+YG+ KDVF PRF++ +  +T   +L         I RV+  W
Sbjct:   11 LRSLHSAKTPISKASMTKI---TKLCFRAIKLYKHAVQCVEKFIEKARTDMKLTGLYLIDSIVRQSIHQYGKDKDVFGPRFSKNIF-KTFNHILNCPVETRSKIERVLTLW 117          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A090L3M5_STRRB (RNA recognition motif domain and CID domain and RNA polymerase II-binding domain and ENTH/VHS domain and Nucleotide-binding, alpha-beta plait domain-containing protein n=4 Tax=Strongyloides TaxID=6247 RepID=A0A090L3M5_STRRB)

HSP 1 Score: 64.3 bits (155), Expect = 2.000e-7
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 0
Query:   12 LNTCCASGPKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGRKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVFGP---LPAYRHPDDDG 137
            LN   +S P     ++E   K+ L    +YK  V  +E FI K   ++KL+G Y++DA++  S HKY  KD F  RFA  +  +T+  +L    S    + RVV+ W  K++F      P Y++ +D G
Sbjct:   18 LNALTSSKPSFGKQRIEEIAKLGLAAVSNYKHVVMHLEKFIWKTTSKYKLIGIYILDALLCASKHKYKGKDKFRVRFAVNLF-KTIKNVLN-NVSDKKKVIRVVKLWEAKKIFEKSVLTPIYKYCEDIG 144          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A0N4ZZ94_PARTI (Uncharacterized protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N4ZZ94_PARTI)

HSP 1 Score: 60.8 bits (146), Expect = 2.500e-6
Identity = 37/113 (32.74%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   12 LNTCCASGPKPSASKVEGATKIALQMAKDYKRAVHVIESFIRKARPEHKLVGCYVVDAVVKNSWHKYGRKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVF 124
            LN   +  P     ++E   K+ L    +YK  V  +E FI K+  ++KL+G Y++DA++  S HKY  KD F  RFA  +  +T+  +L    S    + RV++ W  K++F
Sbjct:   13 LNALTSGKPSFGKQRIEEIAKLGLAAVSNYKHVVMHLEKFIWKSTSKYKLIGIYILDALLCASKHKYKGKDKFRVRFAVNLH-KTIKNVLN-NVSDKGKVVRVLKLWEAKKIF 123          
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Match: A0A1L8DHK0_9DIPT (Putative rna polymerase ii c-terminal domain-binding protein ra4 (Fragment) n=2 Tax=Nyssomyia neivai TaxID=330878 RepID=A0A1L8DHK0_9DIPT)

HSP 1 Score: 60.1 bits (144), Expect = 6.820e-6
Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   56 RPEHKLVGCYVVDAVVKNSWHKYG-RKDVFAPRFAQRMATETLPALLTAQKSHMPSIHRVVREWRDKRVFGP 126
            +PE+K+ G YV+DA+V+ S H++G  KDVFAPRFAQ M  +T   L          I RV+  W    VF P
Sbjct:    2 KPEYKVPGLYVIDAIVRQSRHQFGPEKDVFAPRFAQNMQ-QTFANLFRCTPEDKSKIVRVLNLWLKNNVFSP 72          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6887.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LJK6_ECTSI3.320e-2345.24CID domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A6H5JF85_9PHAE5.790e-2145.45CID domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7G3AYH6_LUTLO3.290e-1241.67Putative rna polymerase ii c-terminal domain-bindi... [more]
A0A6B2EH07_9DIPT7.510e-1241.67Putative rna polymerase ii c-terminal domain-bindi... [more]
A0A671M7F3_9TELE2.940e-935.85Splicing factor, arginine/serine-rich 15-like n=3 ... [more]
A0A671M7Q4_9TELE3.260e-935.85Splicing factor, arginine/serine-rich 15-like n=10... [more]
A0A177B9V9_9BILA7.340e-937.84CID domain-containing protein n=1 Tax=Intoshia lin... [more]
A0A090L3M5_STRRB2.000e-733.33RNA recognition motif domain and CID domain and RN... [more]
A0A0N4ZZ94_PARTI2.500e-632.74Uncharacterized protein n=1 Tax=Parastrongyloides ... [more]
A0A1L8DHK0_9DIPT6.820e-644.44Putative rna polymerase ii c-terminal domain-bindi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006569CID domainSMARTSM00582558neu5coord: 7..137
e-value: 1.7E-5
score: 32.8
IPR006569CID domainPFAMPF04818CIDcoord: 8..126
e-value: 1.4E-14
score: 54.4
IPR008942ENTH/VHSGENE3D1.25.40.90coord: 3..129
e-value: 8.5E-22
score: 79.4
IPR008942ENTH/VHSSUPERFAMILY48464ENTH/VHS domaincoord: 23..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..450
NoneNo IPR availablePANTHERPTHR15921:SF7PROTEIN SCAF8coord: 23..126
IPR045154Protein PCF11-likePANTHERPTHR15921PRE-MRNA CLEAVAGE COMPLEX IIcoord: 23..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6887contigP-wetherbeei_contig6887:64..1633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6887.1.2mRNA_P-wetherbeei_contig6887.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6887 64..1661 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6887.1.2 ID=prot_P-wetherbeei_contig6887.1.2|Name=mRNA_P-wetherbeei_contig6887.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=450bp
MEEEAKSLLRALNTCCASGPKPSASKVEGATKIALQMAKDYKRAVHVIES
FIRKARPEHKLVGCYVVDAVVKNSWHKYGRKDVFAPRFAQRMATETLPAL
LTAQKSHMPSIHRVVREWRDKRVFGPLPAYRHPDDDGSAAPVVAAAGNDD
AGYQSSGDDALVAPSAAGTRGDGGASRSSGVSSPSQAVLKALPGLDEDRR
EADPARRPERRGRESRRSNGASGNGRSPPRQKGQPAGARGRAAIPEPGAP
AAGDASPPDMEVGISPSSPSASRDAPAGAAAAGGGGTARPPPAGAAQAGM
TAGVATNGGPGVEDWKLALQQRVKALVGAGASASGGGGGAGGGGAGAGLG
HPSAAVQVGNVPASSFGAPEGTVAAPRRTATSRWGAAPAVEQLPLLPPQQ
PPPLQHQTAWGDWQQQQQQPPPPISQQQLPSPSPQAPPVQQQRLPPPEPY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006569CID_dom
IPR008942ENTH_VHS
IPR045154PCF11-like