mRNA_P-wetherbeei_contig688.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: D8LR95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR95_ECTSI) HSP 1 Score: 199 bits (505), Expect = 1.500e-50 Identity = 147/418 (35.17%), Postives = 207/418 (49.52%), Query Frame = 2
Query: 380 SRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEE----------------------------------------------SGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTAPFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELEARCGQE---GSVKALFQVAVP---GAFGVFGTADSSGVDSXXXXXXXXXXXXXXXXXSAATGKAASGDSPAVETAMATTEAGPAGIPVVSRLSPHDQADVFEWYVEYVEDFGSSVDKVLEMRTLHENW 1477
S RG R E + R ++HVKPLD+AQL AW+ YLD E+ S GS ++ +RL+ERCLV CA+Y+ W R++LW+ G A+E AER+C LRWRP+A FF A++LER GR +AR++Y HVL+ +APGL+E A +L+ FERR G +AA +AY + L P XXXXXXXXXXX +TT P+L+M +AR+Q+RV+ +P A+ T A+ +P R LW+A LE EA Q G V+A F++A+ G G G ++SG ++ GD+ RL+ D+AD++EW+ E+VED V KV+ +R H W
Sbjct: 330 SLRGRQRRESFERRISRPHFHVKPLDDAQLLAWSQYLDFEQAQAAGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGSGDV---ERLFERCLVPCASYSWLWERYALWKESVRGLESALEVAERACSPFLRWRPEALFFKAELLERVGRKEEARNVYQHVLSEVAPGLVEGACKLACFERRCGNREAASAAYRSLLPPP----LGLPAGXXXXXXXXXXXSHWEETTETTRPYLYMQLARFQQRVLGNPGSARATFRAAVGDIPGSRELWLAFLEFEAAQPQALHAGRVEAAFRMAIGDGGGGTGAGGAKNTSGEEND------------------------DGDA--------------------RRLTVEDRADLWEWFEEFVEDLCMDVAKVMSVRAEHRAW 696
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A7S2V484_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V484_9STRA) HSP 1 Score: 159 bits (402), Expect = 2.230e-39 Identity = 103/243 (42.39%), Postives = 143/243 (58.85%), Query Frame = 2
Query: 401 RTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEH-DAAMSAYEAALAA-----PSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTAPFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELE 1111
R E ++R YYHVKPLDE QL W YLD ES A T+RLYERC+V CANY FW R++ W+ +G + E A R C LR+RP AH F AD+LE G + +AR +Y + ++ GL+E A+R +FERRQGE + A+ Y+ L + G A XXXXXXXXXXXXX PF+++H AR Q++++ D +GA+ T + A+ P ++ +W+A L+ E
Sbjct: 1 RKRFEDKIKRPYYHVKPLDETQLQNWREYLDYSESHCEA--AATERLYERCVVPCANYAEFWMRYANWKETALGAEQSEEVAHRCCSVFLRYRPAAHLFYADLLEAHGHVQEARQVYENASRSVGVGLVELALRWVNFERRQGEAGEKALPIYDQLLEQLKEQQQAVDGKAEGXXXXXXXXXXXXXKDKPAPDSAVLPFVYLHKARLQDKILKDIEGARATYNVAVETYPKNKEIWLALLQFE 241
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A835Z852_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z852_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.300e-37 Identity = 83/159 (52.20%), Postives = 103/159 (64.78%), Query Frame = 2
Query: 392 LAARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAAL 868
+A R PLE L R ++HVKPLD QLAAW + LDLEE+ A R YERCLVACANY FW R++LW +G A A R+C LR RPD H A++LE AG AR +Y VL+ LAPGLLEAA+RL++ ERR+G+ AA++AY AL
Sbjct: 224 VARRAPLEARLVRPFFHVKPLDATQLAAWRALLDLEEAASGA--ARVAAAYERCLVACANYAEFWARYALWTARAVGAAAACNVAGRACA-VLRRRPDVHLLCAELLEAAGYGDAARGMYARVLSDLAPGLLEAAVRLAALERRRGDAAAAVAAYRCAL 379
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A2K1L1J2_PHYPA (Uncharacterized protein n=8 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L1J2_PHYPA) HSP 1 Score: 129 bits (324), Expect = 1.510e-27 Identity = 87/251 (34.66%), Postives = 135/251 (53.78%), Query Frame = 2
Query: 371 YERSRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYLD-LEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVP-AVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTA-PFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELEA 1114
Y+ S+ A E+A+RR Y+HV+PLD+AQL W YLD +E+ GG I +T +LYERCL+ACANY+ +W R+ + R G + A++ R+ ++ RP+ H F A E+ I AR+ Y + +LAPGLLEA ++ ++FE+RQG D A S +E+AL D+ A L++ AR+ ++V+ P+ A++ S AL ++P+ + L A EA
Sbjct: 313 YKTSKEWDAKIRDFEIAIRRPYFHVRPLDDAQLGNWHKYLDFIEKEGG---IEKTIKLYERCLIACANYSEYWVRY-VHRMDEEGKIESALDALHRASSTFVKRRPEIHLFAARYQEQLADIKGARASYEVLSNSLAPGLLEAIVKHANFEKRQGNGDTACSLFESAL------------------------ELGKIKEDSRARAVLYIQYARFLDQVLKSPEKARKVYSTALDSLPSSKTLLEAVTNFEA 535
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A7S0SDA1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SDA1_9CHLO) HSP 1 Score: 119 bits (298), Expect = 2.910e-26 Identity = 64/158 (40.51%), Postives = 91/158 (57.59%), Query Frame = 2
Query: 398 ARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALA 871
AR P E ++R Y+HVKPLD AQ+A W YL EE G ++ RLYERC++ CA + W R++ GPV A +R+ R ++ +AH FLA ER G + AR +Y HV +APGL+ A + ++ ERR G+ A + +EAA+A
Sbjct: 47 AREPFEAGIKRPYFHVKPLDAAQIANWERYLTHEERAG--DVPNVVRLYERCVIPCAAHPALWLRYAAATERYQGPVAARAILQRATRVFVKRHVEAHLFLARFEERQGDVAAAREVYVHVADDVAPGLVRATVEHANMERRAGDPSRARAVFEAAMA 202
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A388LUR0_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LUR0_CHABU) HSP 1 Score: 125 bits (313), Expect = 3.440e-26 Identity = 86/265 (32.45%), Postives = 124/265 (46.79%), Query Frame = 2
Query: 413 EVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTAPFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELEARCGQEGSVKALFQVAVPGAFGVFGTADSSGV 1207
E+A+RR Y+HVKPLDE QLA W YLD E G N+++ +LYERCL+ACANY+ +W A + R+ ++ RP+ H + A E+ AR Y + T LA GLLEA ++ ++ ERRQG D A + +EAAL A + T L M AR+ ++V + + A+ A+ VP + LW + E Q+G + + Q V A AD SG+
Sbjct: 305 EIAIRRPYFHVKPLDEMQLANWHRYLDFLEKEG--NLKKVSKLYERCLIACANYSEYWIXXXXXXXXXXQLEQAEDALVRAATIFVKRRPEVHLYAARYYEKHENTAAARKHYELLCTELAVGLLEAVLKYANLERRQGNLDKAKAVFEAALEAEKS-----------------------KDDPKTFVHLTMQYARFLDQVTRNTEKAREVFREAVERVPFSKALWQGFIFFETLHLQDGGMSRV-QALVEQAITPSARADGSGM 543
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A8J9RZN4_9CHLO (Probable pre-mRNA-processing factor 39 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RZN4_9CHLO) HSP 1 Score: 125 bits (313), Expect = 3.940e-26 Identity = 88/258 (34.11%), Postives = 120/258 (46.51%), Query Frame = 2
Query: 371 YERSRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTAPFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELEARCGQEGSVKA 1144
YE S+ + R E A++R Y+HVKPLD AQL AW+ YLD E G + T LYERCLVACA Y FW R+ + P A E R+ + +P+ A ER G + AR+ Y V++ LAPGL+ A + +FERRQG AA Y+ A+AA + G++ + T FL + A + + D A+ + AL P LW A+ LE G KA
Sbjct: 395 YEASKEEVGRRKAFEDAIKRPYFHVKPLDGAQLLAWSRYLDYAEERGDNTV--TTHLYERCLVACAQYHDFWARYIRFLE-PERPDAAKEALRRAQHIHCKAQPELQLLAARFHERHGDLAAARTAYELVVSKLAPGLISAVLAFVNFERRQGNKAAACKIYDDAVAAAADKGSSS---------------------ERTYAFLVVSYAHFLVQNFKDVDAARSLYASALQQAPGSLSLWEGAIHLEENLDAPGEEKA 628
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A383WHJ6_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WHJ6_TETOB) HSP 1 Score: 124 bits (311), Expect = 7.960e-26 Identity = 110/249 (44.18%), Postives = 139/249 (55.82%), Query Frame = 2
Query: 371 YERSRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIG--PVPAVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTAPFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELE 1111
Y +++ AR E A+RR Y+HVKPLD AQL WA+YLD +E+ G + T RLYERC V CA+Y FW+R+ LW C P A R+ + RPD F A E AG AR+ Y VL+ LAPGLLE + ++FERR G+ P+ XXXXXXXXXXXXXXXXXXXXXX + A FL + A + +V D + A++ L LAA PA + LW AL E
Sbjct: 401 YTATKQQQQARQQYEAAIRRPYWHVKPLDAAQLRNWAAYLDWQEAQGELGL--TVRLYERCCVPCASYPEFWQRYVLW---CEANQPEAAAAVLARATAVHCKRRPDLAVFAARFHEAAGDADAARAAYRRVLSELAPGLLEVVLAAANFERRMGQ--------------PA---XXXXXXXXXXXXXXXXXXXXXXXXXSVAGFLSLLYANFLRQVYGDVERARQVLQEGLAASPACQALWEGALFFE 627
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A7I4FBE9_PHYPA (Uncharacterized protein n=5 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4FBE9_PHYPA) HSP 1 Score: 122 bits (305), Expect = 3.440e-25 Identity = 84/250 (33.60%), Postives = 125/250 (50.00%), Query Frame = 2
Query: 371 YERSRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVP-AVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTA-PFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELEA 1114
Y S+ A E A+RR Y+HV+PLDEAQL W YLD E G + +T +LYERCL+ACANY +W R+ + R G A++ R+ ++ RP+ H F A E+ G + AR+ Y + L GLLEA I+ ++FE+RQG +AA S +E+A D+ A L++ AR+ ++V+ + A+ S AL ++P + LW A + EA
Sbjct: 312 YRASKEWDAKTRDFEAAIRRPYFHVRPLDEAQLGNWHKYLDFVEKEGGVD--KTIKLYERCLIACANYPEYWVRY-VQRMDEEGKTEIALDALHRATVTFVKRRPEIHLFAARYREQQGDVKGARASYEVLRNDLGLGLLEAIIKHANFEKRQGNDEAACSIFESAS------------------------ELEKIKEDSRARAVLYIQYARFLDQVLKSTEKAREVYSTALGSLPTSKTLWEAFINFEA 534
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Match: A0A2K1L9B4_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L9B4_PHYPA) HSP 1 Score: 122 bits (305), Expect = 3.690e-25 Identity = 84/250 (33.60%), Postives = 125/250 (50.00%), Query Frame = 2
Query: 371 YERSRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYLDLEESGGSANIRRTDRLYERCLVACANYTGFWRRWSLWRWWCIGPVP-AVETAERSCRDALRWRPDAHFFLADMLERAGRIIDARSIYHHVLTTLAPGLLEAAIRLSSFERRQGEHDAAMSAYEAALAAPSAAGTAXXXXXXXXXXXXXXXXXXXXXXDTTA-PFLFMHMARYQERVMHDPQGAQRTLSRALAAVPADRGLWMAALELEA 1114
Y S+ A E A+RR Y+HV+PLDEAQL W YLD E G + +T +LYERCL+ACANY +W R+ + R G A++ R+ ++ RP+ H F A E+ G + AR+ Y + L GLLEA I+ ++FE+RQG +AA S +E+A D+ A L++ AR+ ++V+ + A+ S AL ++P + LW A + EA
Sbjct: 312 YRASKEWDAKTRDFEAAIRRPYFHVRPLDEAQLGNWHKYLDFVEKEGGVD--KTIKLYERCLIACANYPEYWVRY-VQRMDEEGKTEIALDALHRATVTFVKRRPEIHLFAARYREQQGDVKGARASYEVLRNDLGLGLLEAIIKHANFEKRQGNDEAACSIFESAS------------------------ELEKIKEDSRARAVLYIQYARFLDQVLKSTEKAREVYSTALGSLPTSKTLWEAFINFEA 534 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig688.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig688.2.1 >prot_P-wetherbeei_contig688.2.1 ID=prot_P-wetherbeei_contig688.2.1|Name=mRNA_P-wetherbeei_contig688.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=450bp MHAYQMRLYLSYERSRRGLAARTPLEVALRRQYYHVKPLDEAQLAAWASYback to top mRNA from alignment at P-wetherbeei_contig688:92..2010+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig688.2.1 ID=mRNA_P-wetherbeei_contig688.2.1|Name=mRNA_P-wetherbeei_contig688.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1919bp|location=Sequence derived from alignment at P-wetherbeei_contig688:92..2010+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig688:92..2010+ >mRNA_P-wetherbeei_contig688.2.1 ID=mRNA_P-wetherbeei_contig688.2.1|Name=mRNA_P-wetherbeei_contig688.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1350bp|location=Sequence derived from alignment at P-wetherbeei_contig688:92..2010+ (Phaeothamnion wetherbeei SAG_119_79)back to top |