mRNA_P-wetherbeei_contig6877.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: D8LS90_ECTSI (eIF3_p135 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS90_ECTSI) HSP 1 Score: 228 bits (582), Expect = 1.360e-59 Identity = 258/743 (34.72%), Postives = 340/743 (45.76%), Query Frame = 1
Query: 1 SLPGIIGRSPQVESRLWLVLGPSGSVGGLKLGPSHGRA--HICDGMMPLQLLPALLRCTATVLTAPCLRRAQEGGAVPRLTAADVDSAGIAAPSATG-CRFKGA---TAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHALALAKADVLSEAAEQAEAALTT--LLPPAQDG---GGALPGGLRPPSASGFPASTTAFASGSPAAAAMHQAPAY--LLVGGVALLSVLRAEQQRGSAAAGTLSCARLSLRRALLNGNXXXXXXXXXXXDGGGRGFAD-GGWRSDGSVSPPRRGEXXXXXPGELLWLWRVLQVLFP-------SSGDGQSMTVWGSHPLVPTVALLLDCAAKGSVSSSSADGSH----SCGSDGPETEPATAAAAPARPEWLRRLLETTVFPSSQL---------------GPAGIAHAAEPAL-------RMTLHVLRNSGLAAGADAAAW---QTPCS-----LLLPTALFEWARPSLDAAADLALASVASVEAAPSPAASRRR----EAASAFMHGGSAVLLEAAKQVERDALQAQGRVFIDGKVR--TREGAAFSRTALATASSRSRLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSVDSGALGAIGARVVDVACGLEHSLLLTSAGQLLACGHGTGGRLG 2046
S+ G G +VESRLWL+LGP G+VGGL+L R+ H+C G+ L LLPAL R +LTA +R+ QE G V R+ + VD P+A G RFKG AA XXXXXXXXXXXX + + E E+AE A T +L P D GG L R + + S +A G+P +A A LL G + + A ++ G A G + L G GG+G + G S G+ + P G LLWLWRVLQV FP ++ + +WGSHPLVP +A LL A K S S A+ S G E +WL L+T FP + L G A AE L R+ +L+ G W + CS LL P F W L ++ AP P A A + GG L + V GR+++DG+V + E A RT + + L L +R+P EW V VACG+RH+AL+TASG +LT+G GE GRLGHGDEEDA P++VRAL D ++ VV A CGR+HT+ A G+V+ +GWGEGG LGLG+V +VL P+ V D+ +G R+ V+CG EHSL ++ AG+L A G GGRLG
Sbjct: 1033 SMAGEAGLFWEVESRLWLLLGPFGAVGGLELDEEEARSSVHLCRGLSGLHLLPALTRNLGILLTARAIRKLQESGVVSRIKLSHVDHR-TGGPAAVGPARFKGLGEEAAAVKRRLRDKCRRRWVATRGSAXXXXXXXXXXXXXRSPGIGWTGATGE--ERAEYAATAEYVLAPFVDASGKGGDLSYARREIAEAHMAVSVADWAEGNPISAKREAELALRALLEGKLGYVDKDEALRREGRAPRGGGGEGAEGVPVPL--GLCVAAAGMLLTACRGGQGGKNLGSNSSSGAAAAPGERLSGKDGEGALLWLWRVLQVHFPGRSSTLGTASGPREAPLWGSHPLVPAIACLL--AGKTSADLSEAEAGSMLLASLKKRGSRRERG------GTMDWLGNQLKTGPFPGNHLNTLLRRKNAASPRFDGGGXXAGGAETHLDPPDAMARLVSVLLKGEG----GFVERWFKVSSSCSGGAAELLAPPDSFSWL-----------LGALGDGGGAPPPFAGDPPPTPVSAVPKQVSGGVDAFLSHVRSVP-------GRLYVDGQVTGLSPEDEAKKRTQDQESDADGALKLLPLRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDN-----LGVRITRVSCGREHSLAVSDAGRLYAFGPSDGGRLG 1735
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A485LRM8_9STRA (Aste57867_23155 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRM8_9STRA) HSP 1 Score: 112 bits (279), Expect = 1.190e-21 Identity = 67/134 (50.00%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 1528 AFSRTALATASSRS----RLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSV 1917
AF+ A ASS S L+L LP ++ VACGYRHAAL+++ G L T G GE GRLGHGDEE PR V + VV A+CGR+HTM VAAD +FGFGWGE G LG G G ++PQ V ++
Sbjct: 1028 AFTNATAAAASSSSMRTIELNLLRFPLPTTHRIQFVACGYRHAALISSRGELFTFGYGECGRLGHGDEEAEAYPRRVDFFDE--IPVVQASCGREHTMVVAADQRLFGFGWGEAGRLGTGASGKCMVPQLVSAI 1159
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A6G0X243_9STRA (PH domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X243_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.300e-20 Identity = 60/113 (53.10%), Postives = 70/113 (61.95%), Query Frame = 1
Query: 1570 RLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAV 1908
+L L LP +++V+CGYRHAAL+T G L T G GE GRLGHGDEE P VR D VV +CGR+HTM VA D +FGFGWGE G LG G+ G L PQ V
Sbjct: 1035 QLSLLRFPLPMTTSIQYVSCGYRHAALITTRGELFTFGYGECGRLGHGDEETVRHPERVRFFDD--IPVVHVSCGREHTMVVAEDKRLFGFGWGEAGRLGTGESGKCLEPQVV 1145
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A1V9ZS90_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZS90_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.760e-19 Identity = 59/114 (51.75%), Postives = 72/114 (63.16%), Query Frame = 1
Query: 1573 LDLFGVRLPAEWV--VRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAV 1908
+DL +R P V V V+CGYRHAA++T SGAL T G GE GRLGHGDEE P+ V + + V+ AACGR+HTM V ++GFGWGE G LG G+ G L PQ V
Sbjct: 1058 VDLTMLRFPLPMVHKVSFVSCGYRHAAMITTSGALFTFGYGECGRLGHGDEEAIDQPKQV--MYFENKPVLHAACGREHTMVVTQSNQLYGFGWGEAGRLGTGESGKALEPQPV 1169
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A397AIH4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AIH4_9STRA) HSP 1 Score: 102 bits (255), Expect = 7.700e-19 Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 1
Query: 1456 VERDALQA-QGRVFIDGKV---------------RTREGAAFSRTALATASSRSRLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSV 1917
+ER + A G F++G V + R+ A + T+L+ + + L+L LP + V V+CGYRHAA+LT L T+G GE GRLGHGDE A P V L +G V +CGR+HTM V AD V+GFGWGE G LG G+ G L+P + V
Sbjct: 632 IERTSFWATNGLAFVEGNVMGMSLDVEQRNMLQNQQRDPALHAFTSLSCSMRSTDLNLLRFPLPMKNTVHFVSCGYRHAAVLTTRAELFTLGYGECGRLGHGDENAALHPTRV-DLFEGIP-VSHVSCGREHTMVVTADNRVYGFGWGEAGRLGTGESGKCLVPTQLTDV 799
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A425DLG9_9STRA (Uncharacterized protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DLG9_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.890e-18 Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 1516 REGAAFSRTALATASSRSRLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSV 1917
R+ A + T+L+ + + L+L LP + V V+CGYRHAA++T L T+G GE GRLGHGDE A P V L +G V +CGR+HTM V AD V+GFGWGE G LG G+ G L+P + V
Sbjct: 467 RDPALHAFTSLSCSMRSTDLNLLQFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHPTRV-DLFEGIP-VSHVSCGREHTMVVTADNRVYGFGWGEAGRLGTGESGKCLVPTQLTDV 598
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A3R7C2L6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7C2L6_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.390e-18 Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 1516 REGAAFSRTALATASSRSRLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSV 1917
R+ A + T+L+ + + L+L LP + V V+CGYRHAA++T L T+G GE GRLGHGDE A P V L +G V +CGR+HTM V AD V+GFGWGE G LG G+ G L+P + V
Sbjct: 795 RDPALHAFTSLSCSMRSTDLNLLRFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHPTRV-DLFEGIP-VSHVSCGREHTMVVTADNRVYGFGWGEAGRLGTGESGKCLVPTQLTDV 926
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: W4GXB4_9STRA (eIF3_p135 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXB4_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.780e-18 Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 1516 REGAAFSRTALATASSRSRLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSV 1917
R+ A + T+L+ + + L+L LP + V V+CGYRHAA++T L T+G GE GRLGHGDE A P V L +G V +CGR+HTM V AD V+GFGWGE G LG G+ G L+P + V
Sbjct: 1026 RDPALHAFTSLSCSMRSTDLNLLQFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHPTRV-DLFEGIP-VSHVSCGREHTMVVTADNRVYGFGWGEAGRLGTGESGKCLVPTQLTDV 1157
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A3R6ZVZ9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6ZVZ9_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.960e-18 Identity = 61/134 (45.52%), Postives = 80/134 (59.70%), Query Frame = 1
Query: 1516 REGAAFSRTALATASSRSRLDLFGVRLPAEWVVRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSV 1917
R+ A + T+L+ + + L+L LP + V V+CGYRHAA++T L T+G GE GRLGHGDE A P V L +G V +CGR+HTM V AD V+GFGWGE G LG G+ G L+P + V
Sbjct: 1312 RDPALHAFTSLSCSMRSTDLNLLRFPLPMKNTVHFVSCGYRHAAVVTTRAELFTLGYGECGRLGHGDENAALHPTRV-DLFEGIP-VSHVSCGREHTMVVTADNRVYGFGWGEAGRLGTGESGKCLVPTQLTDV 1443
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Match: A0A7S3Y9A0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y9A0_HETAK) HSP 1 Score: 90.5 bits (223), Expect = 2.340e-17 Identity = 60/137 (43.80%), Postives = 76/137 (55.47%), Query Frame = 1
Query: 1612 VRHVACGYRHAALLTASGALLTVGLGEAGRLGHGDEEDAPAPRIVRALLDGRRRVVAAACGRQHTMCVAADGAVFGFGWGEGGCLGLGDVGSVLLPQAVPSVDSGALGAIGARVVDVACGLEHSLLLTSAGQLLACG 2022
V+ V CG +HAA+LTA G + T G G GRLGHGD PR V AL GR V ACG +T V+A GA++ +G GE G LGLGD L P V ++ A+ A+ A G H+ +L GQ+ ACG
Sbjct: 12 VKQVCCGGQHAAVLTARGEVFTWGRGGFGRLGHGDAAPQKEPRRVAALARGRVHCVQVACGFAYTCAVSAAGALYTWGAGENGRLGLGDPEDRLSPARVAALAGTAVRAVYA-------GSVHTCVLAVDGQVYACG 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6877.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6877.1.1 >prot_P-wetherbeei_contig6877.1.1 ID=prot_P-wetherbeei_contig6877.1.1|Name=mRNA_P-wetherbeei_contig6877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=688bp SLPGIIGRSPQVESRLWLVLGPSGSVGGLKLGPSHGRAHICDGMMPLQLLback to top mRNA from alignment at P-wetherbeei_contig6877:727..3231+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6877.1.1 ID=mRNA_P-wetherbeei_contig6877.1.1|Name=mRNA_P-wetherbeei_contig6877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2505bp|location=Sequence derived from alignment at P-wetherbeei_contig6877:727..3231+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6877:727..3231+ >mRNA_P-wetherbeei_contig6877.1.1 ID=mRNA_P-wetherbeei_contig6877.1.1|Name=mRNA_P-wetherbeei_contig6877.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2064bp|location=Sequence derived from alignment at P-wetherbeei_contig6877:727..3231+ (Phaeothamnion wetherbeei SAG_119_79)back to top |