mRNA_P-wetherbeei_contig6870.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6870.2.1
Unique NamemRNA_P-wetherbeei_contig6870.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A835Z2A9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2A9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 8.240e-24
Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERL 234
            QLGY+P NL+ +AAR+ DG  APTVL LYP++ P    RN   L+PFPT+YWLCCP LK  VSRLE  GLV  +E RL
Sbjct:   12 QLGYVPPNLISVAARNRDG--APTVLLLYPVSAPVCTRRNKVELQPFPTIYWLCCPQLKADVSRLEVAGLVQEFEARL 87          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A7S2FGU9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FGU9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 6.250e-12
Identity = 35/79 (44.30%), Postives = 49/79 (62.03%), Query Frame = 1
Query:    4 LGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPT--RRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERL 234
            LGY+P NL+++AARS   +R P V+K YPL      RR +      PFPT+YWL C  L+  +S LE +G V  +E+R+
Sbjct:   27 LGYVPPNLLKVAARSKVDER-PIVIKTYPLGGGAVRRRVKAEADRTPFPTLYWLSCDKLQTAISELERRGFVATFEDRV 104          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A497TLL1_9ARCH (DUF501 domain-containing protein n=1 Tax=Candidatus Aenigmarchaeota archaeon TaxID=2093792 RepID=A0A497TLL1_9ARCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.980e-9
Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERLQ 237
            Q+G  P+ L  IA R   G   P V+ ++P+ E           KPFPT+YWL CPYL   + RLEA+GL+   EE+L+
Sbjct:   15 QIGRRPRGLYGIAVRCPYGY--PQVIVVHPIVEG----------KPFPTIYWLTCPYLSKGIDRLEAEGLIGKLEEKLR 81          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: UPI0006908410 (DUF501 domain-containing protein n=1 Tax=Mesoaciditoga lauensis TaxID=1495039 RepID=UPI0006908410)

HSP 1 Score: 58.9 bits (141), Expect = 5.660e-9
Identity = 30/76 (39.47%), Postives = 46/76 (60.53%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEE 228
            QLG  PKN++E++ R   G   P V+K  P+ +           KPFPT+YWL CPYL+  +S++EA+G +  +E+
Sbjct:    7 QLGRTPKNVLEVSYRCSYG--FPVVVKSNPVLDG----------KPFPTIYWLTCPYLRYRISQIEAEGGIAKYEK 70          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A1V9Z5R7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z5R7_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 8.750e-9
Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 1
Query:    4 LGYLPKNLVEIAARSVDGKRA--PTVLKLYPLAE--PTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERLQ 237
            LGY+P NL+ +AA  V  +    P VL+LYPL       +      ++PFPT +WL    LK  VS LE  G V ++ +RL+
Sbjct:   50 LGYVPNNLIRVAAMHVSAEHGHEPAVLQLYPLRNCMDAYKKHERAYIEPFPTTFWLASTELKEKVSVLEGMGYVEIFTDRLE 131          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A6G0WVN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WVN6_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.750e-8
Identity = 35/79 (44.30%), Postives = 46/79 (58.23%), Query Frame = 1
Query:    4 LGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTR--RTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERL 234
            LGY+P NLV +AA S D    P+VL LYPL    +  +  +    +PFPT+YWL    L   +S LEA G+V L  +RL
Sbjct:   59 LGYVPTNLVRVAAMSGD---EPSVLLLYPLRNCMQDYKKHHRKLAEPFPTIYWLASQELSERISILEASGVVSLLTDRL 134          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A101HTL2_9BACT (UvrABC system protein C n=2 Tax=Petrotoga TaxID=28236 RepID=A0A101HTL2_9BACT)

HSP 1 Score: 58.5 bits (140), Expect = 3.510e-8
Identity = 33/79 (41.77%), Postives = 47/79 (59.49%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERLQ 237
            QLG +  N++ +  R + G   P V+K +PL       ++G   KPFPT+YWL CPYL   VS+LEAQG +   E+ +Q
Sbjct:   17 QLGRIVSNVLNVEKRCIYGY--PQVIKSFPL-------KDG---KPFPTLYWLTCPYLLEEVSKLEAQGRITEIEKIIQ 83          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A124FEK8_9BACT (Uncharacterized protein n=2 Tax=Petrotoga TaxID=28236 RepID=A0A124FEK8_9BACT)

HSP 1 Score: 57.0 bits (136), Expect = 3.680e-8
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERLQ 237
            QLG +  N++ +  R + G   P V+K +PL       ++G   KPFPT+YWL CPYL    S+LEAQG +   E+ +Q
Sbjct:   17 QLGRIVSNVLNVEERCIYGY--PQVIKSFPL-------KDG---KPFPTLYWLTCPYLVEEASKLEAQGKITEIEKIIQ 83          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A7C2XM86_9BACT (DUF501 domain-containing protein n=2 Tax=Mesoaciditoga TaxID=1495038 RepID=A0A7C2XM86_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 4.280e-8
Identity = 28/78 (35.90%), Postives = 45/78 (57.69%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTMYWLCCPYLKLHVSRLEAQGLVPLWEERL 234
            QL  +P N+ EI  R   G   PTV++ +P+ +           KPFPT+YWL CP+++  +S++E+ G +  +EE L
Sbjct:   13 QLNRIPHNVSEIVKRCSFG--FPTVIRSFPVLDG----------KPFPTLYWLTCPFMRSEISKIESNGGIKKYEEML 78          
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Match: A0A7S3PU01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PU01_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.720e-8
Identity = 38/82 (46.34%), Postives = 45/82 (54.88%), Query Frame = 1
Query:    1 QLGYLPKNLVEIAARSVDGKRAPTVLKLYPL--AEPTRRTRNGGGLKPFPTMYWLCC--PYLKLHVSRLEAQGLVPLWEERL 234
            QLGY+P NLV +AAR   G   P VL+ YPL      R+ +  G L PFPT YW     P  K  VS LE +G V  +E RL
Sbjct:   58 QLGYIPCNLVSVAARRSTGD--PLVLRTYPLNGGAKRRKLKAEGDLTPFPTHYWFITSNPVSKA-VSALEQKGYVAKFESRL 136          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6870.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2A9_9STRA8.240e-2460.26Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2FGU9_9STRA6.250e-1244.30Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A497TLL1_9ARCH1.980e-941.77DUF501 domain-containing protein n=1 Tax=Candidatu... [more]
UPI00069084105.660e-939.47DUF501 domain-containing protein n=1 Tax=Mesoacidi... [more]
A0A1V9Z5R7_9STRA8.750e-939.02Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0WVN6_9STRA1.750e-844.30Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A101HTL2_9BACT3.510e-841.77UvrABC system protein C n=2 Tax=Petrotoga TaxID=28... [more]
A0A124FEK8_9BACT3.680e-840.51Uncharacterized protein n=2 Tax=Petrotoga TaxID=28... [more]
A0A7C2XM86_9BACT4.280e-835.90DUF501 domain-containing protein n=2 Tax=Mesoacidi... [more]
A0A7S3PU01_9STRA4.720e-846.34Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6870contigP-wetherbeei_contig6870:2511..3269 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1380358.JADJ01000012_gene844
PFAMsDUF501
Model size237
Max annot lvl135619|Oceanospirillales
KEGG koko:K09009
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.82e-11
EggNOG OGsCOG1507@1|root,COG1507@2|Bacteria,1RDW4@1224|Proteobacteria,1S5CM@1236|Gammaproteobacteria,1XKAI@135619|Oceanospirillales
DescriptionProtein of unknown function (DUF501)
Cds size237
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186942.7655346-CDS-P-wetherbeei_contig6870:2510..25711683186942.7655346-CDS-P-wetherbeei_contig6870:2510..2571Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6870 2511..2571 +
1683186942.7760677-CDS-P-wetherbeei_contig6870:2824..28981683186942.7760677-CDS-P-wetherbeei_contig6870:2824..2898Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6870 2825..2898 +
1683186942.7857473-CDS-P-wetherbeei_contig6870:3167..32691683186942.7857473-CDS-P-wetherbeei_contig6870:3167..3269Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6870 3168..3269 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6870.2.1prot_P-wetherbeei_contig6870.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6870 2511..3269 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6870.2.1

>prot_P-wetherbeei_contig6870.2.1 ID=prot_P-wetherbeei_contig6870.2.1|Name=mRNA_P-wetherbeei_contig6870.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=79bp
QLGYLPKNLVEIAARSVDGKRAPTVLKLYPLAEPTRRTRNGGGLKPFPTM
YWLCCPYLKLHVSRLEAQGLVPLWEERLQ
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mRNA from alignment at P-wetherbeei_contig6870:2511..3269+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6870.2.1 ID=mRNA_P-wetherbeei_contig6870.2.1|Name=mRNA_P-wetherbeei_contig6870.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=759bp|location=Sequence derived from alignment at P-wetherbeei_contig6870:2511..3269+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCTCGGCTACCTCCCGAAAAACCTTGTGGAGATTGCGGCCCGGTCCGT CGACGGTAAGCGTTGCCTCTGCGTTTTTCGCGCCGCGCTTTCTGGTGTTA GCTTTGGTTTTTGACGGTCTGCTGACGGGAAAGGCGTTCTGTTCTTTTCC GACCGCATTTTTTTCTCGCCTTAGTTTGATGGCTCGCCAAGAATGAAGCG GTGAAAGTGTATATGGGAGATTGTGGATCTTGTGTGTTTTCGAGCAAAGA GCTAAATCGTAGTGAGCATTTCGCTACTACGTCGCGTCGTTTCTATGACT GGTTGCATTTCCAGGGGCGCCGACTGTGCTCAAGTTGTACCCGCTGGCGG AGCCGACGCGGCGCACCAGAAACGGCGGCGGCCTGAAGGTGTGTGAGAAT CCTTGCTGTTGCGTCCGCACTTGCTTCTCCCATTCTTTCCTGTGCGTGCG TAATTCAATCCGCCTTTTTGGAGTTTAAAGGCCGAGGGGCACATGCCTCA CAGACTCGGACAGGCGCGCTCATTACGCACTCAGCAGCGTCGATCTCTCT TCCGGGTTCCTGTTTACCACTGTCTTCTTCCTCATTTGGTTCGCCTTTCG TCGTGACGGCCGGCTTGGCCCTCACCACTCTCCCTTTCCGCTTCTTTCCT AACGCAGCCGTTCCCGACGATGTATTGGCTCTGCTGCCCGTACCTGAAGC TGCACGTGTCGCGGCTGGAGGCGCAAGGGCTGGTGCCGCTCTGGGAAGAG CGCTTGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6870:2511..3269+

>mRNA_P-wetherbeei_contig6870.2.1 ID=mRNA_P-wetherbeei_contig6870.2.1|Name=mRNA_P-wetherbeei_contig6870.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=237bp|location=Sequence derived from alignment at P-wetherbeei_contig6870:2511..3269+ (Phaeothamnion wetherbeei SAG_119_79)
CAGCTCGGCTACCTCCCGAAAAACCTTGTGGAGATTGCGGCCCGGTCCGT
CGACGGTAAGCGGGCGCCGACTGTGCTCAAGTTGTACCCGCTGGCGGAGC
CGACGCGGCGCACCAGAAACGGCGGCGGCCTGAAGCCGTTCCCGACGATG
TATTGGCTCTGCTGCCCGTACCTGAAGCTGCACGTGTCGCGGCTGGAGGC
GCAAGGGCTGGTGCCGCTCTGGGAAGAGCGCTTGCAG
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