mRNA_P-wetherbeei_contig686.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig686.2.1
Unique NamemRNA_P-wetherbeei_contig686.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: D7FQ58_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ58_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 4.720e-33
Identity = 92/258 (35.66%), Postives = 126/258 (48.84%), Query Frame = 1
Query:  295 PRKWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDDA------------------------------------AGP--PAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAFALPVLVGGPGLRGS-----------GVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEVRF 921
            PR+W L VA G  L+F L +R      H F+  L+LEG  V+S G  +         L V V A GL+P + F +  ++FG +VVSRDP  L+ Y GE   RN S   + W +DDA                                    +GP  P  YV+PT G+L+PGEE ++R+TFTP R     F LPV +     RG+           GV+P LTF    + LP VPL + +RA F+V N G++D+EV +
Sbjct: 1231 PRQWKLLVAAGDTLSFNLVFRPLRFGDHAFSFPLSLEG--VSSDGAKH---------LRVPVSAVGLRPTLTFVSTEVDFGRKVVSRDPCALKQYQGEFIFRNASDKGLCWVMDDAYLKEPGPRAEGVAENDNNTGVSTPPSPSADAAAAASSGPVTPVLYVSPTSGQLSPGEESRVRLTFTPNRAGVLTFTLPVWLARVPERGTRPYLTLCVKAFGVFPCLTFTHSPVELPVVPLSVTSRAVFMVENNGFSDMEVSY 1477          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: A0A835Z976_9STRA (Calponin-homology (CH) domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z976_9STRA)

HSP 1 Score: 135 bits (341), Expect = 7.240e-32
Identity = 90/242 (37.19%), Postives = 118/242 (48.76%), Query Frame = 1
Query:  301 KWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLK------------PAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDDA-----AGP---PAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAFALPVLV--------GGP-------GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEVRF 921
            +W + VAPG      + Y      +H F L L  E          Y  +         A+LAR               P +  S  AL+FG+R+V+RD      Y  + + RN S   I W LDD+     A P   P FYV+PT GELAPGEE  +R TF PR D  Y   LP+ +        GG        GL G GVYPRL+F C+E+ LP VPLG+ + ARFLVVN G++++EV +
Sbjct:  475 RWRIVVAPGVSFPISVTYEPRVPGAHDFALPLTFE----------YAASAPLLPADMAALLARATXXXXXXXXAAAAAPLLQLSAPALDFGERIVARDAETKATYQAQASLRNASPRAIAWCLDDSELREDADPTLTPVFYVSPTSGELAPGEETFVRCTFVPRWDARYEATLPLHLAAAVPSGKGGSVRPYLKLGLHGIGVYPRLSFSCDEVVLPVVPLGVRSAARFLVVNQGFSELEVTY 706          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: A0A662Y0T1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y0T1_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.170e-30
Identity = 110/347 (31.70%), Postives = 157/347 (45.24%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAP--RLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAAAATVATAAAAETP--------------RKWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDDA-----------------------AGPPAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLVGGP-----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            ++V +RGG  L+LPV    + PD+ L   AP   ++FG++  G      L L N   +  SL LDL +       E     P    A +  A++   P               KW ++V P   ++  L +    V SH   L L + G  V SG           S L   V+AR ++P + FS+ AL F  RV++R+  +  PY+  +   N    P+ W +D A                       A    F++AP RGELAPGEEV +RV+F P    +YA   LP+LV         LRG G++P L+F    + LP VPLG+  RARFLV   GY  +E+
Sbjct: 1433 VVVAIRGGKVLRLPVNASVVVPDVVL---APLEAVDFGEVVLGVAVPRLLSLENRSAISASLVLDLGSAASALTDEFALATPARLLAHLDDASSVFVPLSPTEGGEQDESRCAKWQISVPPHATVSCHLVFTPRRVGSHDAVLPLQIAG--VGSG---------PASPLFRRVVARAIEPRLRFSSAALHFQRRVITREGIRKVPYTKSLVLSNADTRPLRWQIDTARLRQGHLVLGAAKRGASACPANSATAVVFHLAPDRGELAPGEEVALRVSFLPLDAVEYAEDELPLLVDDEPYVHLSLRGEGIHPHLSFSASRVVLPTVPLGVTARARFLVHATGYDHLEL 1765          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: A0A662WVX4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVX4_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.670e-28
Identity = 106/347 (30.55%), Postives = 155/347 (44.67%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAP--RLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAAAATVATAAAAETP--------------RKWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDDA-----------------------AGPPAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLVGGP-----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            ++V +RGG  L+LPV    + PD++L   AP   ++FG++  G      L L N   +  SL LDL         E     P    A +  A++   P               KW +++ P   ++  L +    V SH   L L + G  V SG           S L   ++AR ++P + FS+  L F   V++R+  +  PY+  +   N    P+ W +D A                       A    F++AP RGELAPGEEV +RV+F P    +YA   LP+LV         LRG G++P L+F    + LP VPLG+  RARFLV   GY  +E+
Sbjct: 1425 VVVAIRGGKVLRLPVNASVVVPDVTL---APLDAVDFGEVVLGVAVPRLLSLENRSAISASLILDLGLPASALTDEFALATPARLLAHLDDASSVFVPLSSTEGGEQDEIRCAKWQVSIPPHTTVSCHLVFTPRRVGSHDAVLPLQIAG--VGSG---------PASPLFRRIVARAIEPRLRFSSATLHFQRCVITREGIRKVPYTKSLVLSNADTRPLRWQIDTARLRQGHLVLGAAKRGTSACPTNSATAVVFHLAPDRGELAPGEEVTLRVSFLPLDAVEYAEDELPLLVDDEPYVHLSLRGEGIHPHLSFSASRVVLPTVPLGVTARARFLVHATGYDHLEL 1757          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: H3H3R6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H3R6_PHYRM)

HSP 1 Score: 119 bits (297), Expect = 4.750e-26
Identity = 107/375 (28.53%), Postives = 158/375 (42.13%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAPRLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAA----AATVATAAAAETPR---------------------KWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDDA-----------AGPPA-------------------------------FYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLVGGP-----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            ++V +RGG  L+LPV    + PD+ L + A  ++FGD+  G      + L N   +   L LDLS+    H      P  + A    A+++      + PR                     KW + + P   ++  L +  T   S+   L L + G   + G GG        + L   VLAR + P + FS+  + F   V++ +  +  PY+ ++   ND A P+ W +D A           AG  A                               F+VAP RGELAPGEEV IRV+F P    +Y    LP+LV G       LRG G++P L+F    + LP VPLG+   A F V   GY  +E+
Sbjct: 1086 IVVGLRGGKVLRLPVTASVLVPDVLL-VPADAIDFGDVVLGVSVPRVISLENHSSIPACLLLDLSSSAFSHEFALATPPRLVAHLEDASSIFIPLTDDKPRDIAITPDNEAEYDEDASARCSKWQICLPPHATVSCHLVFTPTKEGSYDLVLPLQIAGVGSSFGSGGP-------TPLKRRVLARAIVPRLRFSSSTMHFNRCVITCEGIRKVPYTKQLVLTNDDAQPLRWQVDTARLRQGNLVTFAAGAAAATVSAGAVSSGTTLAKRIASANPTNSATAVVFHVAPDRGELAPGEEVAIRVSFLPLDAVEYTEDELPLLVDGEPYVNLSLRGEGIHPHLSFSTNRVVLPTVPLGVTASASFHVHATGYDHLEL 1452          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: G4ZHI3_PHYSP (Uncharacterized protein n=12 Tax=Phytophthora TaxID=4783 RepID=G4ZHI3_PHYSP)

HSP 1 Score: 114 bits (285), Expect = 1.800e-24
Identity = 105/376 (27.93%), Postives = 155/376 (41.22%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAP--RLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAA----AATVATAAAAETPR----------------------KWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALD----------------------------------------DAAGPPAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLV-GGP----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            +++ VRGG  L+LPV    + PD+ L   AP   ++FG++  G      + L N   +   L LDL +           P  + A    A+ +      + PR                      KW + + P   ++  L +      SH   L L + G      G   G  N A + L   V+AR + P + FS+  + F   V++R+  +  PY+ ++   ND A PI W +D                                        ++A    F+VAP  GELAPGEEV IRV+F P    +YA   LP+LV GGP     LRG G++P L+F    + LP VPLG+   A   V   GY  +E+
Sbjct: 1162 IVITVRGGKVLRLPVTASVLVPDVFL---APVEAIDFGEVVLGVSVPRVISLENHSSIPACLLLDLGSSAFSDEFAIATPPRLIAHLEDASNIFVPLTDDKPRHGGANTQDGEADTDDDLSARCVKWQICLPPHSTVSCHLVFTPLKEGSHDLVLPLQIAGV-----GSSSGPNNGAPAPLRRRVIARAIVPRLRFSSSTMHFNRCVITREGIRKVPYTKQLVLTNDDAQPIRWQIDTSRLRQGNLVTFAAGAXXXXXXXXXXXXALAKRIASANPTNSATAVVFHVAPDCGELAPGEEVTIRVSFLPLDAVEYAEDELPLLVDGGPYVNLSLRGEGIHPHLSFSTNRVVLPTVPLGVTATAHIQVYATGYDHLEL 1529          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: A0A225WDF7_9STRA (MSP domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WDF7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.020e-23
Identity = 103/373 (27.61%), Postives = 153/373 (41.02%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAPRLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAA----AATVATAAAAETPR---------------------KWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDD-----------AAGPPA-----------------------------FYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLVGGP-----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            ++V +RGG  L+LPV+   + P++ L   A  L+FG++  G      + L N   +   L LDL             P  + A    A+ +      E PR                     KW + + P   ++  L +      SH   L L + G + +SG       N +   L   VLAR + P + FS+  + F   +++RD  +  PY+ ++   ND    I W +D            AAG  A                             F+VAP +GELAPGEEV IRV+F P    +YA   LP++V         LRG G++P L+F    + LP VPLG+   A F V   GY  +E+
Sbjct: 1115 IVVTLRGGKVLRLPVSASVLVPEVFLA-PAKALDFGEVVLGVSVPRVISLENHSSIPACLLLDLGTSAFSEEFALATPPRLLAHLDDASNIFIPLTEENPRDIINTHDESDQDTVKNDATCLKWQICLPPHATVSCHLVFTPLKEGSHDLVLPLQIAGVSSSSGPN-----NTSTHPLKRRVLARAVVPRLRFSSSTMHFNRCIITRDGIRKVPYTKQLVLSNDHEQTIRWQIDTTRLRQGNLVTFAAGAAAAGSTGPTSGSTLAKRIASAHPTNSATAVVFHVAPDKGELAPGEEVSIRVSFLPLDAVEYAEDELPLMVDDEPYVNLSLRGEGMHPHLSFSTNRVVLPTVPLGVTASAHFQVHATGYDHLEL 1481          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: V9FWK4_PHYPR (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=V9FWK4_PHYPR)

HSP 1 Score: 111 bits (277), Expect = 2.020e-23
Identity = 102/369 (27.64%), Postives = 152/369 (41.19%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAPRLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAAAATVATAAAAETP---------------------RKWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDD-----------AAGPPA-----------------------------FYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLVGGP-----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            ++V VRGG  L+LPV+   + PD+ L   A  + FG++  G      + L N   +   L LDL +  +   L      P    A +  A+    P                      +W + + P   ++  L +  +   SH   L L + G            A+ A++ L   VLAR + P + FST  + F   +++R+  +  PY+ ++   ND    I W +D            AAG  A                             F+VAP RGELAPGE+V IRV+F P    +YA   LP+ V         LRG G+YP L+F    + LP VPLG+   A+F V   GY  +E+
Sbjct: 1095 IIVTVRGGKVLRLPVSASVLVPDVFLT-PADAIEFGEVVLGVSVPRVISLENHSSIPACLLLDLGSSFDEFALST----PPRLLAHLEDASNIFVPLTDDKFKVVEDDEGLSSDSRCSRWQICLPPHATVSCHLVFAPSKEGSHDLVLPLQIAG------------ASMAQTSLKRRVLARAIVPRLRFSTSTIHFNRCIITREGIRKVPYTKQLVLTNDDEQTIRWQIDTTRLRQGNLIQFAAGAAAVVASGASSGAALAKRIASVNPSSSAMSVVFHVAPDRGELAPGEQVTIRVSFLPLDAVEYADDELPLFVDDEFYVNFSLRGEGIYPHLSFSTNRVVLPTVPLGMTANAQFHVYATGYDHLEL 1446          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: A0A7S2WAU2_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WAU2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.050e-23
Identity = 93/348 (26.72%), Postives = 150/348 (43.10%), Query Frame = 1
Query:    7 GLMVRVRGGGDLKLPVAVEAMEPDISLRLHAPRLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAAA-----------ATVATAAAAETPR-----------------KWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALD--------DAAGPPAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAFALPVLVGGPG--------LRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEVR 918
            G+++++RGG D++LPV  EA+ P +++     +++F  +  G  A   + L+N   V   L LDL+   EF +  +LAP   A              T+      E                     + L V P   L   + +   +  +H F L + + G  V                L   +LA GL+P +  S   + F  RVV+RD  +  P+  E+T  N     + W L         +A     F + P+RG+L PG+   +++ F PR D  Y   LP+ +            L+G G++PR+ FD  E+ LP +PLG+  RA F V N GY  +E++
Sbjct:  177 GIILQLRGGMDIRLPVFCEAIVPKVAIV--EDQVDFEGVTIGSSAEKLITLQNESAVSAVLVLDLTKHMEFEI--SLAPNEAAEKKEDDLESLLRPVTIENDEEDENTSFLLGDGSDIRGIEDETAAFELRVPPFRALKLSIKFTPVSEQAHAFQLPIMMSGKAVPG--------------LDHFILAEGLRPKLSLSQNLINFETRVVARDRLKKIPFYKEITVTNHHDRSLHWELGLESLSQFGEAEEKQTFTIKPSRGQLEPGDACLVKIGFIPRDDVTYFETLPLYLDDDRGKEYIHLILQGVGMFPRIRFDSPEVVLPTIPLGVKARAMFTVYNEGYEHLELQ 506          
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Match: A0A329S381_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S381_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.060e-22
Identity = 97/370 (26.22%), Postives = 151/370 (40.81%), Query Frame = 1
Query:   10 LMVRVRGGGDLKLPVAVEAMEPDISLRLHAPRLNFGDLAAGGEATAFLELRNGGDVEGSLFLDLSAQPEFHVLEALAPAPVAAAATVAT---------------------AAAAETPRKWHLTVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARSKLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSAAPIIWALDD-----------AAGPPA------------------------------FYVAPTRGELAPGEEVKIRVTFTPRRDNDYAF-ALPVLVGGP-----GLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVEV 915
            ++V +RGG  L+LPV    + PD+ L   A  +++G++  G      + + N   +   L LDL A           P  + A    A+                     + +     +W + + P   ++ +L +      +H   L L + G            A+ A + L   V+AR + P + FS   + F   ++SR+  +  PY+ ++   ND    I W +D            AAG  A                              F++AP RGELAPGEEV +RV+F P    +YA   LP+LV G       LRG G+YP L+F    + LP VPLG+   A+F V   GY  +E+
Sbjct: 1099 IIVTIRGGKVLRLPVNASVLVPDVFLA-PADAIDYGEVVIGVSVPRVISMENHSSIPACLLLDLGASSISDEFSLATPPRLLAHLEDASNIFVPLTDDKLKEVEDSEEELSQSDSRCSRWQICLPPHATVSCQLVFTPLKEGNHDLVLPLQIAG------------ASNAPASLKRRVVARAIAPRLRFSASTMHFSRCIISREGIRKVPYTKQIVLTNDDEQTIRWQIDTTRLRQGNLIQFAAGAAAAVAASGVSSGAALAKRIASANPTNSATSVVFHMAPDRGELAPGEEVTVRVSFLPLDAVEYAEDELPLLVDGGFYVNFSLRGEGIYPHLSFSTNRVVLPTVPLGVTASAKFQVYATGYDHLEL 1455          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig686.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FQ58_ECTSI4.720e-3335.66Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A835Z976_9STRA7.240e-3237.19Calponin-homology (CH) domain-containing protein n... [more]
A0A662Y0T1_9STRA5.170e-3031.70Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662WVX4_9STRA4.670e-2830.55Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
H3H3R6_PHYRM4.750e-2628.53Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
G4ZHI3_PHYSP1.800e-2427.93Uncharacterized protein n=12 Tax=Phytophthora TaxI... [more]
A0A225WDF7_9STRA2.020e-2327.61MSP domain-containing protein n=1 Tax=Phytophthora... [more]
V9FWK4_PHYPR2.020e-2327.64Uncharacterized protein n=9 Tax=Phytophthora TaxID... [more]
A0A7S2WAU2_9STRA4.050e-2326.72Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A329S381_9STRA3.060e-2226.22Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig686contigP-wetherbeei_contig686:1314..3433 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQ58
Preferred nameCHDC2
PFAMsCH,PapD-like
Model size924
Max annot lvl2759|Eukaryota
KEGG rclassRC00299
KEGG koko:K01593
KEGG ReactionR00685,R00699,R00736,R02080,R02701,R04909
KEGG Pathwayko00350,ko00360,ko00380,ko00901,ko00950,ko00965,ko01100,ko01110,ko04726,ko04728,ko05030,ko05031,ko05034,map00350,map00360,map00380,map00901,map00950,map00965,map01100,map01110,map04726,map04728,map05030,map05031,map05034
KEGG ModuleM00037,M00042
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.12e-38
EggNOG OGs2CBV6@1|root,2QQ4Q@2759|Eukaryota
EC4.1.1.105,4.1.1.28
Cds size912
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig686.2.1prot_P-wetherbeei_contig686.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig686 1314..3421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186941.9323182-CDS-P-wetherbeei_contig686:1313..14541683186941.9323182-CDS-P-wetherbeei_contig686:1313..1454Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig686 1314..1454 -
1683186941.9453657-CDS-P-wetherbeei_contig686:1933..20741683186941.9453657-CDS-P-wetherbeei_contig686:1933..2074Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig686 1934..2074 -
1683186941.9558053-CDS-P-wetherbeei_contig686:2239..25931683186941.9558053-CDS-P-wetherbeei_contig686:2239..2593Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig686 2240..2593 -
1683186941.9659119-CDS-P-wetherbeei_contig686:3103..32891683186941.9659119-CDS-P-wetherbeei_contig686:3103..3289Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig686 3104..3289 -
1683186941.9760509-CDS-P-wetherbeei_contig686:3331..34211683186941.9760509-CDS-P-wetherbeei_contig686:3331..3421Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig686 3332..3421 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186941.9864726-UTR-P-wetherbeei_contig686:3421..34331683186941.9864726-UTR-P-wetherbeei_contig686:3421..3433Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig686 3422..3433 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig686.2.1

>prot_P-wetherbeei_contig686.2.1 ID=prot_P-wetherbeei_contig686.2.1|Name=mRNA_P-wetherbeei_contig686.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=304bp
MVRVRGGGDLKLPVAVEAMEPDISLRLHAPRLNFGDLAAGGEATAFLELR
NGGDVEGSLFLDLSAQPEFHVLEALAPAPVAAAATVATAAAAETPRKWHL
TVAPGGCLAFRLAYRATTVASHTFNLRLALEGTTVASGGGGYGGANAARS
KLTVAVLARGLKPAIVFSTLALEFGDRVVSRDPSQLRPYSGEVTARNDSA
APIIWALDDAAGPPAFYVAPTRGELAPGEEVKIRVTFTPRRDNDYAFALP
VLVGGPGLRGSGVYPRLTFDCEEIRLPPVPLGIPTRARFLVVNGGYADVE
VRF*
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mRNA from alignment at P-wetherbeei_contig686:1314..3433-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig686.2.1 ID=mRNA_P-wetherbeei_contig686.2.1|Name=mRNA_P-wetherbeei_contig686.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2120bp|location=Sequence derived from alignment at P-wetherbeei_contig686:1314..3433- (Phaeothamnion wetherbeei SAG_119_79)
GGCTTCGGGCTGATGGTGCGCGTACGCGGCGGCGGCGACCTCAAGCTGCC GGTGGCCGTCGAAGCGATGGAGCCCGACATCTCCCTGCGGCTGCACGCGC CGGTCGGGCCCACGATCCACGCCGCCGTCGACCCGGATGCGCAGCGGCTC AACTTTGGCGACCTGGCAGCAGGCGGCGAGGCTACGGCGTTCTTGGAGCT CCGCAACGGTGGCGACGTGGAGGGGTCGCTGTTCCTGGACCTTTCGGCGC AGCCGGAATTTCACGTGTTGGAGGCGCTTGCGCCTGCTCCTGTAGCTGCA GCAGCGACGGTAGCGACGGCGGCGGCAGCAGTGTCGGGGGCGGCGGCTTC AGCGACCGGAGTGGCCGCGACAGCGGCTGCAGATGATGCGACGGCCCCTG CTGCGGGCCCAGGAACAGATGCCGATAGAGCGATGAACGGCAGAGCTGCT GCGGCTTCTGCCGCAGCGGCGGCGGCCCCGGCAGCTCCACTGTCGCCGGG ACCAAGTGCTGTGGAAGGCGGCAGGGGCACTACCAGAGACGCGTTGACCA AGAACGGGCAGCGCGGCGGCTCTGGCAGCGACCACGGCGGCGATGACGAA TCGCGCAGCGACTGTGCCGAAGATGGCGACGGCAAGGGTGGCGCCGCGTC TTTCATCGTCCCCGTCGAAAGCGCTGATTTCTTCCCCCCTGGCCGTTTCG GAGTAGGGCTGGAAGGCTCCGGCGCCCTCGGGGGGTCCCGTGAGTCCAGG GTGCCTCACGACAGCGGTCGCGGTGGCGGCCCTGGCCTTGATGCTTGCGG CAGCGGTAGCGGTGGCACCGCATCAGTGGGCGTAGGAAAGGAGACGCCGC GCAAGTGGCACCTGACGGTGGCGCCCGGCGGCTGTCTCGCTTTCCGGCTA GCGTACCGCGCGACGACGGTCGCCTCCCACACTTTCAATCTGCGGCTGGC GCTGGAAGGCACCACCGTCGCCTCCGGCGGCGGCGGTTATGGCGGCGCGA ACGCAGCGCGCAGCAAGCTGACGGTGGCAGTTTTGGCACGCGGGCTGAAG CCGGCGATCGTCTTTTCCACGCTGGCGCTCGAATTTGGTGACCGCGTCGT GTCCCGCGATCCGTCGCAGCTGCGGCCGTACTCAGGCGAGGTGACGGCGC GCAACGACTCCGCAGCGCCCATTATCTGGGCGCTTGACGACGCCGTCCTC CGCGGCGGCCGCCCCAGCACGGCCCCGACGGCAGCAGGCGGCGCCAGGTG CAGCAGCGGCAGCCCCGATGAAGAGTCGGTTGTGGCTGCCGCTGTAGCTG CTTCTGCAGCGGTTGCGGCGGCGGCTTCGGGCGGTTCGGTGGGAGGTGCG GCGGCGGAGGCGGGGCCACCGGCATTCTACGTGGCGCCGACGCGGGGGGA GCTGGCGCCGGGCGAGGAGGTGAAAATTCGGGTGACCTTCACTCCGCGGC GGGACAACGACTACGCCTTTGCGCTGCCGGTACTCGTGGGCGGACCTGGC GTGGCGGACAGCAGCGCAGGCCATGGCGGCCCCCTGTCCTCCGGGAACAG GTGGGTCCTATTCTCCTACAGGTTTTCTTCCTACTGAATCCCAAAGAACC TTGCTTTGCCAAGCATTTGCGAGAACGCTCTTTGGAAAGACTTTGGGAAT GGACGCCTTTGCGTCTCCTCGGCGTGGTGCTGTCGTTGTTAAATGGCGGG GTTCGGTGGGCTTTGCCTGTGGGCTCGGTCGGCGCGCTTTGCCTGTGAGC TCGGTCGGCGCGCTTTGCCTGTGACGGCCGTTTCTCGTAAAGATCTATTC GACTTTGACCAATCGGATCGCGCAGGAGCCGCCAATTGAGTCGCGTAAAC CTTCTGGACCGACCCGCGCCGTCACGCGCCGCCAGCGTGCTCGGTCCCCC CGGCAGTGCCGCTGCTGCTGCCGCCGCCGCTGCCGCCTTTGCCGCTACGG TGGCGCTGCGGCCGTACCTGACTCTGCAGCTGCGCGGCAGCGGGGTGTAC CCACGGCTGACATTCGACTGCGAGGAGATCCGGCTGCCGCCGGTGCCGCT AGGCATCCCGACGCGCGCGCGCTTCCTTGTTGTCAACGGTGGTTATGCAG ATGTCGAGGTGCGTTTTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig686:1314..3433-

>mRNA_P-wetherbeei_contig686.2.1 ID=mRNA_P-wetherbeei_contig686.2.1|Name=mRNA_P-wetherbeei_contig686.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=912bp|location=Sequence derived from alignment at P-wetherbeei_contig686:1314..3433- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGCGCGTACGCGGCGGCGGCGACCTCAAGCTGCCGGTGGCCGTCGA
AGCGATGGAGCCCGACATCTCCCTGCGGCTGCACGCGCCGCGGCTCAACT
TTGGCGACCTGGCAGCAGGCGGCGAGGCTACGGCGTTCTTGGAGCTCCGC
AACGGTGGCGACGTGGAGGGGTCGCTGTTCCTGGACCTTTCGGCGCAGCC
GGAATTTCACGTGTTGGAGGCGCTTGCGCCTGCTCCTGTAGCTGCAGCAG
CGACGGTAGCGACGGCGGCGGCAGCAGAGACGCCGCGCAAGTGGCACCTG
ACGGTGGCGCCCGGCGGCTGTCTCGCTTTCCGGCTAGCGTACCGCGCGAC
GACGGTCGCCTCCCACACTTTCAATCTGCGGCTGGCGCTGGAAGGCACCA
CCGTCGCCTCCGGCGGCGGCGGTTATGGCGGCGCGAACGCAGCGCGCAGC
AAGCTGACGGTGGCAGTTTTGGCACGCGGGCTGAAGCCGGCGATCGTCTT
TTCCACGCTGGCGCTCGAATTTGGTGACCGCGTCGTGTCCCGCGATCCGT
CGCAGCTGCGGCCGTACTCAGGCGAGGTGACGGCGCGCAACGACTCCGCA
GCGCCCATTATCTGGGCGCTTGACGACGCCGCGGGGCCACCGGCATTCTA
CGTGGCGCCGACGCGGGGGGAGCTGGCGCCGGGCGAGGAGGTGAAAATTC
GGGTGACCTTCACTCCGCGGCGGGACAACGACTACGCCTTTGCGCTGCCG
GTACTCGTGGGCGGACCTGGCCTGCGCGGCAGCGGGGTGTACCCACGGCT
GACATTCGACTGCGAGGAGATCCGGCTGCCGCCGGTGCCGCTAGGCATCC
CGACGCGCGCGCGCTTCCTTGTTGTCAACGGTGGTTATGCAGATGTCGAG
GTGCGTTTTTGA
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