mRNA_P-wetherbeei_contig6848.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI) HSP 1 Score: 192 bits (488), Expect = 1.430e-53 Identity = 94/130 (72.31%), Postives = 104/130 (80.00%), Query Frame = 1
Query: 1 VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLVK--RPP 384
V WLT++L GIIAAPLSG SSK+DR EIMRRLQD R+ VVTTEMAARGLDVA LTHVVNYDLPTDADHYVHRAGRCGRAGRPGIV+N+ P+ KFV+GKFA LGL F D EV+ + W V PP
Sbjct: 1101 VNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIAMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVVNMATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEPP 1230
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA) HSP 1 Score: 169 bits (429), Expect = 1.250e-45 Identity = 83/121 (68.60%), Postives = 96/121 (79.34%), Query Frame = 1
Query: 1 VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKL 363
V WLT+KL GIIAAPLSG S KE+RTEIM+RL DGRL VVTTEMAARG+DV +LTHVVNYDLPTDA+HYVHRAG GIV+N+ P+TKFV+ KF+ +LGL F D +VKDSKL
Sbjct: 801 VRWLTEKLETVGIIAAPLSGESVKEERTEIMKRLTDGRLAMVVTTEMAARGIDVPQLTHVVNYDLPTDAEHYVHRAGXXXXXXXXGIVVNMAQPDTKFVISKFSQRLGLEFVDVDVKDSKL 921
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2XV29_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV29_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.470e-43 Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 1
Query: 10 LTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGK-FAGKLGLSFADAEVKDSKLWLVKRPPD 387
L +KL + GI+AAPLSG SSK+DR E +RRLQ G++ +V+TE+AARGLDV +LTHVVNYDLPTDA+HYVHRAGRCGRAG+PGIV++ T P+ FVL K FA KLG+ F + E K KL ++K P +
Sbjct: 413 LLEKLLDLGIVAAPLSGESSKDDRKEAVRRLQKGQISVLVSTELAARGLDVPQLTHVVNYDLPTDAEHYVHRAGRCGRAGKPGIVVSFTTPKLNFVLTKKFAPKLGIEFQEIEAKYGKL-ILKSPDE 538
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A0G4F225_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F225_VITBC) HSP 1 Score: 144 bits (362), Expect = 1.080e-36 Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 1 VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLVKR 378
V WL D L + IIAAPLSG +SK+DR E+ +R+Q+G++G V+TE+ ARGLDV L+HVVN DLPTDA+HY+HRAGR GRAG PG+V+N P+T+FV+ K L + + ++ + K+ L +
Sbjct: 654 VKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGRVGRAGNPGVVMNFVTPDTRFVIRKLEKALNIDIREVDLYEGKVMLKSK 779
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2RGS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGS7_9STRA) HSP 1 Score: 139 bits (350), Expect = 4.810e-35 Identity = 74/121 (61.16%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 10 LTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLV 372
L DKL + GIIAAPL G SSKEDRTEIMRRL GRLG VVTTE+AARG+D LTHVVN DLP DA Y HRAGR GRAGRPGIV++ P K K LG+ DA + +L +V
Sbjct: 737 LCDKLLDVGIIAAPLHGESSKEDRTEIMRRLASGRLGLVVTTELAARGIDAPILTHVVNLDLPPDATRYAHRAGRVGRAGRPGIVLSFITPWQKKEATKLTSALGVDLHDAVLHGGRLLMV 857
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: L1JBQ8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBQ8_GUITC) HSP 1 Score: 129 bits (323), Expect = 1.320e-32 Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 1
Query: 10 LTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAV---VTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKL 363
+ DKL E G+IAAPL G SKEDR E+MRRL++G LG V V TE+AARG+D+ L+HVV+ DLPTDA+HYVHRAGR R G G I + P+ KFV+ KF +LGL F +V + +L
Sbjct: 264 ICDKLFENGLIAAPLKGDESKEDRKEVMRRLREGTLGEVPLVVATEIAARGIDIPGLSHVVSLDLPTDANHYVHRAGRTARGGAEGTSIVLCEPQEKFVVEKFCKELGLDFQYGQVYEQEL 384
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S4R6D9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R6D9_9STRA) HSP 1 Score: 131 bits (329), Expect = 1.460e-32 Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 1
Query: 10 LTDKLGEAGIIAAPLSG--LSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPE--TKFVLGKFAGKLGLSFADAEVKDSKLWLVK 375
+ DKL + GI+AAPL G S K DR E+ R L+DG +G VV+TEMAARG+D LTHV+N DLPTDA HY HR+GRCGR GRPG+V+N T K V +FA +LG+ E + KL +++
Sbjct: 440 VVDKLADMGIVAAPLFGGTKSDKNDRAEVARALRDGYVGIVVSTEMAARGIDAPLLTHVINLDLPTDASHYAHRSGRCGRGGRPGVVVNFTSGNGGEKSVPKRFAEELGIDMYSVEARGGKLRILE 565
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2EH88_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EH88_9STRA) HSP 1 Score: 131 bits (329), Expect = 3.210e-32 Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 1
Query: 10 LTDKLGEAGIIAAPLSG--LSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPE--TKFVLGKFAGKLGLSFADAEVKDSKLWLVK 375
+ DKL + GI+AAPL G S K DR E+ R L+DG +G VV+TEMAARG+D LTHV+N DLPTDA HY HR+GRCGR GRPG+V+N T K V +FA +LG+ E + KL +++
Sbjct: 719 VVDKLADMGIVAAPLFGGTKSDKNDRAEVARALRDGYVGIVVSTEMAARGIDAPLLTHVINLDLPTDASHYAHRSGRCGRGGRPGVVVNFTSGNGGEKSVPKRFAEELGIDMYSVEARGGKLRILE 844
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2S9L8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9L8_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.570e-31 Identity = 56/86 (65.12%), Postives = 67/86 (77.91%), Query Frame = 1
Query: 19 KLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVT 276
KL E GIIAAP +G K+DRT++ + L++G +G VV TEMAARG+D LTHV+NYDLPTDA HY HRAGR R GRPGIVIN+T
Sbjct: 72 KLAEMGIIAAPFTGEEQKQDRTDVNKALREGYVGIVVATEMAARGIDAPYLTHVINYDLPTDASHYAHRAGRVARGGRPGIVINMT 157
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A0G4FYR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FYR2_9ALVE) HSP 1 Score: 125 bits (315), Expect = 2.550e-30 Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 1
Query: 46 APLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLVK 375
APLSG +SK +R E+ R LQDG + + TE+ ARG+D+ LTH VN DLP D +HYVHRAGR GRAG PG+V+N P+ +FV+ K+ LGL E+ + +LW++K
Sbjct: 781 APLSGWTSKAERAEVFRELQDGGVDLTIATEVCARGVDLPFLTHAVNLDLPNDIEHYVHRAGRVGRAGNPGLVVNFVTPDNRFVIKKYEKALGLKIPRVELFEGRLWVMK 890 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6848.1.1 >prot_P-wetherbeei_contig6848.1.1 ID=prot_P-wetherbeei_contig6848.1.1|Name=mRNA_P-wetherbeei_contig6848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARback to top mRNA from alignment at P-wetherbeei_contig6848:84..594+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6848.1.1 ID=mRNA_P-wetherbeei_contig6848.1.1|Name=mRNA_P-wetherbeei_contig6848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=511bp|location=Sequence derived from alignment at P-wetherbeei_contig6848:84..594+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6848:84..594+ >mRNA_P-wetherbeei_contig6848.1.1 ID=mRNA_P-wetherbeei_contig6848.1.1|Name=mRNA_P-wetherbeei_contig6848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig6848:84..594+ (Phaeothamnion wetherbeei SAG_119_79)back to top |