mRNA_P-wetherbeei_contig6844.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6844.1.2
Unique NamemRNA_P-wetherbeei_contig6844.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: A0A6H5JXW2_9PHAE (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW2_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 2.390e-83
Identity = 145/284 (51.06%), Postives = 182/284 (64.08%), Query Frame = 1
Query:   40 LEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYD-RPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRIIAAVATHDERTARASGRXXXXXXXAAGC--GSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRYRNHPTQQPPSMYYITGESFVCDGEGC 882
            ++VL+++PE+SLV+QSRDA  HPGC +KRNIRVNGDGFGIAWY  R   +  C+VKF TPAWS+TNLL +++F+++GL+FAHVRAASDG  L G V++EN+HPFK  RY FMHNG +  F  +KR LLA L DE Y TIEG+TDSELCFA FLDEL             SA E++  L +T+ RI++AVA+           XXXXX  +     G                      PA SLN CVTDGR IV +RYR+H  Q PPS++ + G  F CD  GC
Sbjct:    1 MDVLVTKPEHSLVFQSRDASFHPGCADKRNIRVNGDGFGIAWYTPRRIEEGGCVVKFPTPAWSNTNLLNIAKFVESGLVFAHVRAASDGAVLVGNVNHENTHPFKYKRYTFMHNGGIPGFARMKRQLLAQLGDEAYLTIEGSTDSELCFAYFLDELPNTGDQL------SAQEISQVLRRTIARIVSAVASLSASPCPXXXXXXXXXAPSTSGHDGGPTTSLPDAASVRGGSSASAAAPAMSLNFCVTDGRHIVCSRYRSHARQNPPSLFVLAGAGFACDEAGC 278          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: D8LKF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 2.980e-79
Identity = 162/289 (56.06%), Postives = 200/289 (69.20%), Query Frame = 1
Query:   25 GKPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYD-RPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRIIAAVATHDERTA--RASGRXXXXXXXAAGCGSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRYRNHPTQQPPSMYYITGESFVCDGEGC 882
            G  + ++VL+++PE+SLV+QSRDA  HPGC +KRNIRVNGDGFGIAWY  R   +  C+VKF TPAWS+TNLL +++F+++GL+FAHVRAASDG  L G V++EN+HPFK  RY FMHNG +  F  +KR LLA L D  Y  +EG+TDSELCFA FLDEL             SA E++  L +T+ RI++AVA+    T        XXXXXXX    G  XXXXXXXXXXXXXXXXX   PA SLN CVTDGR IV +RYR+H  Q PPS++ + G    CD  GC
Sbjct:    2 GASVPMDVLVTKPEHSLVFQSRDASFHPGCADKRNIRVNGDGFGIAWYTPRRIEEGGCVVKFPTPAWSNTNLLNIAKFVESGLVFAHVRAASDGAVLVGNVNHENTHPFKYKRYTFMHNGGIPGFARMKRQLLAQLGDAAYLAVEGSTDSELCFAYFLDELPNTGDQL------SAQEISKVLRRTIARIVSAVASLSASTCPPXXXXXXXXXXXXXGHDGXXXXXXXXXXXXXXXXXXXAAAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGC 284          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: A0A482RVP5_9ARCH (Class II glutamine amidotransferase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVP5_9ARCH)

HSP 1 Score: 174 bits (440), Expect = 1.790e-50
Identity = 89/179 (49.72%), Postives = 114/179 (63.69%), Query Frame = 1
Query:    1 MCRLLCYKGKPIALEVLISRPENSLVYQSRDAGLHPGCENK---RNIRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNE-LTGRV--SYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAG 519
            MCRL  YKGKP+ +  L++ P NSL+YQSRDA  HPG  +K   RNI VNGDGFG+ WY        C  KF TPAWS+ NL  +   + + L+ AH+RAAS G++ L  RV  S+EN HPF+ GR+ FMHNG +  F  IKR L   L +  ++ I+G+TDSE  FA+FL  L  K G
Sbjct:    1 MCRLTLYKGKPMLIGDLVTNPSNSLIYQSRDAAYHPGVTDKTHRRNILVNGDGFGVCWYGENVSKGGCCFKFVTPAWSNGNLRSIGEHVASHLVCAHIRAASSGHDPLHERVAVSHENCHPFRYGRFTFMHNGGIPYFARIKRPLQNLLHEAFFSEIKGSTDSEHIFALFLHYLYAKVG 179          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: A0A3P3Y5S0_PLABS (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y5S0_PLABS)

HSP 1 Score: 169 bits (429), Expect = 3.000e-47
Identity = 116/311 (37.30%), Postives = 155/311 (49.84%), Query Frame = 1
Query:    1 MCRLLCYKG---KPIALEVLISRPENSLVYQSRDAGLHPGCENKRN-----IRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAA--------EMAAALEQTVRRIIAAVATHDERTARASGRXXXXXXXAAGCGSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRYRNHP--TQQPPSMYYITGESFVCDGEG 879
            MCRLL YKG   +P+ L  LI+RPE+S++ QS D      C  ++        +N DGFGI WY +     PC+     PAW++ NL  L   + + L+FAHVRAA  G+ +T      N HPF  GRY FMHNG +A F  +KR L+A+L DE +A IEGTTDSE CFAVF+DEL R   + P   GA+          ++  A+  TV+R+         R  R              CG                     T  S LN  VTDG  +V +R  +    T+Q  SMY+ +G SF C+ +G
Sbjct:    1 MCRLLVYKGLDDQPVLLSDLITRPEHSIIKQSYD------CRERQEGSHLPKALNADGFGIGWYAKEVDCTPCVFTSTLPAWNNRNLNRLCAKVSSPLVFAHVRAAGLGSAITET----NCHPFVSGRYMFMHNGHIAQFGKLKRKLVASLTDECFAIIEGTTDSEHCFAVFMDELTRCLSSSPTSTGATPIFDRTGRPQDLLDAMTMTVKRL---------RRIRQE------------CG--------------------ITEHSYLNFAVTDGDCVVISRIVDDDSGTKQAASMYFSSGTSFKCNKDG 260          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: UPI0019B45B5D (Class II glutamine amidotransferase n=1 Tax=bacterium TaxID=1869227 RepID=UPI0019B45B5D)

HSP 1 Score: 164 bits (415), Expect = 2.510e-45
Identity = 102/292 (34.93%), Postives = 146/292 (50.00%), Query Frame = 1
Query:    1 MCRLLCYKGKPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRIIAAVATHDERTARASGRXXXXXXXAAGCGSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRYRNHPTQQPPSMYYITGESFVCDGE 876
            MCR L Y GKP+  + L+ RP++SL+ + +  G       + +I +NGDGFG++WYD    + PC  +   PAWS  NL  L++ I + +LFAH+RAA+ G+     V   N HPF  GR  +MHNG V  F+ I+R +L  L +E Y  + G+TDSE  F +FL++L   +GA       S  EM  A+          +  H+ R+                                          S LN CV++GRSIVATRY  +P  QP S+YY+ G  +V +GE
Sbjct:    1 MCRFLAYIGKPVLADDLLYRPQHSLM-ERQSLGAQ-----EMSIPINGDGFGLSWYDFNLDEVPCQFRSVHPAWSDQNLRFLAKKIKSPMLFAHIRAATPGS----LVEEVNCHPFVHGRLTWMHNGMVQGFRQIRRPMLRELSEEAYDAVHGSTDSEHMFGLFLNKLDDPSGAV------STDEMVQAMFGMFEDFNRLIMEHNVRS-----------------------------------------HSYLNFCVSNGRSIVATRYTTNPRVQPASLYYMFGRDYVAEGE 235          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: M5SBM5_9BACT (Glutamine amidotransferase, class-II n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5SBM5_9BACT)

HSP 1 Score: 160 bits (404), Expect = 8.120e-44
Identity = 101/293 (34.47%), Postives = 145/293 (49.49%), Query Frame = 1
Query:    1 MCRLLCYKGKPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRIIAAVATHDERTARASGRXXXXXXXAAGCGSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRYRNHPTQQPPSMYYITGESFVC-DGE 876
            MCR + Y+G+PI ++ L +RP+NS+++QS  + L           +NGDGFG+AWY     D P + +   PAW+  NL +L+    + L+ AHVRAA+   +    VS  N HPF  GR+ FMHNG+VA +  ++R  + TL+DE+Y  + G TDSEL FA+FL ELG   G  P         M+ A++  +RR         ERT                                          + LNL VT+GR +VATR+ +     P S+++  GE   C DGE
Sbjct:    1 MCRFVLYRGEPITIDTLTTRPKNSIIHQSFQSQLG-------EQPLNGDGFGLAWYVPDLSDSPALFRSTQPAWNDRNLQQLAEVSKSHLILAHVRAATGDTD----VSQANCHPFVGGRFVFMHNGSVANYHQVRRGWMQTLRDESYDQVRGQTDSELMFALFLGELGDSNGIGP---------MSEAVQNVIRRA--------ERT---------------------------------RTEQKIEEPNFLNLAVTNGREVVATRFASD-NATPRSLFFAQGEGCECEDGE 231          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: A0A0H5R783_9EUKA (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R783_9EUKA)

HSP 1 Score: 160 bits (405), Expect = 1.350e-43
Identity = 111/311 (35.69%), Postives = 147/311 (47.27%), Query Frame = 1
Query:    1 MCRLLCYKG---KPIALEVLISRPENSLVYQS-----RDAGLH-PGCENKRNIRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGAC-------PLQRGASAAEMAAALEQTVRRIIAAVATHDERTARASGRXXXXXXXAAGCGSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRY--RNHPTQQPPSMYYITGESFVCDGEG 879
            MCRLL YKG   +P+ L  LI+RPE+S++ Q+     R  G H P         +N DGFGI WY       PC+     PAW++ NL  L   I + L+FAHVRAA  G+ +T      N HPF  GRY FMHNG +A F  +KR L+A+L D+ +  IEGTTDSE CFAVFLDEL R    C          +      +  A++ T+RR+         R  R              CG                        S LN  VTDG  +  +R    +  T++  SMY+ +G +F C+  G
Sbjct:    1 MCRLLVYKGLNHQPVLLSNLITRPEHSIIKQAYQCRERQEGTHLPNA-------LNADGFGIGWYTPKIDWTPCVFTSTLPAWNNRNLNRLCAKISSSLIFAHVRAAGQGSPITET----NCHPFVAGRYMFMHNGHIAEFSKLKRKLVASLGDKAFQIIEGTTDSEHCFAVFLDELSRCTNVCGKVCDDFSSSQPVLPQHLLDAMKNTIRRL---------RELRIE------------CG--------------------INEHSHLNFAVTDGECVAISRVIDDDSKTKKAASMYFSSGTTFKCNSTG 259          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: A0A7Y5HI91_9PLAN (Class II glutamine amidotransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5HI91_9PLAN)

HSP 1 Score: 156 bits (394), Expect = 6.570e-43
Identity = 87/197 (44.16%), Postives = 119/197 (60.41%), Query Frame = 1
Query:    1 MCRLLCYKGKPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRI 591
            MCR + Y G+PI+LE L++ P NSL+ QS DA        +   R+NGDGFG+AWY     D P + K  +PAWS+ NL  L+R + +  + AHVRAA+ G  +T      N HPF  GRYAFMHNG V  FK ++R +   L D++Y  +EG+TDSE  F +FLD +     A   ++G  A  +A AL QTVR++
Sbjct:    1 MCRFVAYVGQPISLESLVTLPRNSLINQSVDA-------REFEERLNGDGFGVAWYAHDVSDEPAVFKSVSPAWSNRNLHSLARVVHSSTILAHVRAATPGMPVTET----NCHPFARGRYAFMHNGHVGDFKTVRRPMRRFLSDDSYDAVEGSTDSEHLFGLFLDRVA----ALGDRQGDDA--LALALGQTVRQV 180          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: A0A7V9TVB7_9BACT (Class II glutamine amidotransferase n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A7V9TVB7_9BACT)

HSP 1 Score: 158 bits (399), Expect = 8.740e-43
Identity = 90/197 (45.69%), Postives = 112/197 (56.85%), Query Frame = 1
Query:    1 MCRLLCYKGKPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRI 591
            MCR LCY G  I L  L+ RP+NSL+ QS  +        +R   +NGDGFG+ WY       PC+    TPAW++ NLL LS  + +   FAHVRAAS       RVS  N HPF+ GRY +MHNG +  F  IKR L ++L D  Y  IEGTTDSE  FAVFL+ LG        +R  SA+EM   L  TV+ +
Sbjct:    1 MCRFLCYLGPEILLSDLLYRPKNSLILQSYKS-------QERREPLNGDGFGVGWYAPTISPTPCVFTSLTPAWNNQNLLRLSEHVKSPCFFAHVRAASPDM----RVSEMNCHPFQYGRYLWMHNGTIEGFSQIKRRLRSSLPDSLYNAIEGTTDSEHAFAVFLNLLG------DTERQHSASEMGQVLVNTVKEL 180          
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Match: G4T6K7_SERID (Glutamine amidotransferase type-2 domain-containing protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4T6K7_SERID)

HSP 1 Score: 158 bits (400), Expect = 1.960e-42
Identity = 103/299 (34.45%), Postives = 159/299 (53.18%), Query Frame = 1
Query:    1 MCRLLCYKG-KPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDGFGIAWYDRPAR--DFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASDGNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYATIEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTV--RRIIAAVATHDERTARASGRXXXXXXXAAGCGSAXXXXXXXXXXXXXXXXXXTTPASSLNLCVTDGRSIVATRYRNHPTQQPPSMYYITGESFVCDGEGC 882
            MCRL+ YKG +PI L  L++RP +S++ Q+ D+ L    + +R I  NGDGFG+ WYD P+     PCI    TPAW++ NL  ++  I + L+F HVRA + G+     +S +N HP++ GR  +MHNG +A F  +KR L A L DE +A  +G TDSE  FA+FL EL +     P  + +S  + +A +   +  + ++A ++T + R AR +G                                  +  S +N CV DG+++VATRY +    +  S+YY +G +F  +   C
Sbjct:    1 MCRLVIYKGTEPILLSHLLTRPAHSIINQAFDSRLR--LDRRRPI--NGDGFGVGWYDTPSDGGSEPCIFTSITPAWNNANLTRIAEKIRSPLVFGHVRATTAGS-----LSQDNCHPWRYGRLMWMHNGGIAEFDRLKRPLQALLPDEIFAVPQGNTDSEWAFALFLAELSKLHPIIP--KSSSTPDHSAPIPHDLLQKAMLATISTLN-RLARDAG---------------------------------VSEPSLMNFCVADGQTVVATRYISSKKDEAASLYYSSGTTFCEESVHC 254          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6844.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXW2_9PHAE2.390e-8351.06Glutamine amidotransferase type-2 domain-containin... [more]
D8LKF2_ECTSI2.980e-7956.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RVP5_9ARCH1.790e-5049.72Class II glutamine amidotransferase (Fragment) n=1... [more]
A0A3P3Y5S0_PLABS3.000e-4737.30Glutamine amidotransferase type-2 domain-containin... [more]
UPI0019B45B5D2.510e-4534.93Class II glutamine amidotransferase n=1 Tax=bacter... [more]
M5SBM5_9BACT8.120e-4434.47Glutamine amidotransferase, class-II n=2 Tax=Rhodo... [more]
A0A0H5R783_9EUKA1.350e-4335.69Glutamine amidotransferase type-2 domain-containin... [more]
A0A7Y5HI91_9PLAN6.570e-4344.16Class II glutamine amidotransferase n=1 Tax=Planct... [more]
A0A7V9TVB7_9BACT8.740e-4345.69Class II glutamine amidotransferase n=1 Tax=Blasto... [more]
G4T6K7_SERID1.960e-4234.45Glutamine amidotransferase type-2 domain-containin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6844contigP-wetherbeei_contig6844:673..2443 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKF2
Preferred nameDUG3
PFAMsGATase_4
Model size882
Max annot lvl2759|Eukaryota
KEGG rclassRC00408
KEGG koko:K01836,ko:K14262,ko:K18802
KEGG ReactionR08193
KEGG Pathwayko00520,ko01100,ko01130,map00520,map01100,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004044,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006518,GO:0006575,GO:0006749,GO:0006751,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0009056,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0016787,GO:0019538,GO:0032991,GO:0034641,GO:0042219,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044424,GO:0044464,GO:0051186,GO:0051187,GO:0061672,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368
Exons4
Evalue4.88e-80
EggNOG OGsCOG0449@1|root,KOG1268@2759|Eukaryota
EC5.4.2.3
Descriptionglutamine-fructose-6-phosphate transaminase (isomerizing) activity
Cds size882
COG categoryM
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186941.318755-CDS-P-wetherbeei_contig6844:672..10801683186941.318755-CDS-P-wetherbeei_contig6844:672..1080Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6844 673..1080 -
1683186941.331931-CDS-P-wetherbeei_contig6844:1325..14731683186941.331931-CDS-P-wetherbeei_contig6844:1325..1473Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6844 1326..1473 -
1683186941.3446283-CDS-P-wetherbeei_contig6844:1726..18481683186941.3446283-CDS-P-wetherbeei_contig6844:1726..1848Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6844 1727..1848 -
1683186941.3639605-CDS-P-wetherbeei_contig6844:2239..24431683186941.3639605-CDS-P-wetherbeei_contig6844:2239..2443Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6844 2240..2443 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6844.1.2prot_P-wetherbeei_contig6844.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6844 673..2443 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6844.1.2

>prot_P-wetherbeei_contig6844.1.2 ID=prot_P-wetherbeei_contig6844.1.2|Name=mRNA_P-wetherbeei_contig6844.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp
MCRLLCYKGKPIALEVLISRPENSLVYQSRDAGLHPGCENKRNIRVNGDG
FGIAWYDRPARDFPCIVKFATPAWSSTNLLELSRFIDAGLLFAHVRAASD
GNELTGRVSYENSHPFKVGRYAFMHNGAVATFKDIKRSLLATLQDETYAT
IEGTTDSELCFAVFLDELGRKAGACPLQRGASAAEMAAALEQTVRRIIAA
VATHDERTARASGRAAGRAAGAAGCGSAATAAAAPSAAAPSTSAGTTTPA
SSLNLCVTDGRSIVATRYRNHPTQQPPSMYYITGESFVCDGEGC
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mRNA from alignment at P-wetherbeei_contig6844:673..2443-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6844.1.2 ID=mRNA_P-wetherbeei_contig6844.1.2|Name=mRNA_P-wetherbeei_contig6844.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1771bp|location=Sequence derived from alignment at P-wetherbeei_contig6844:673..2443- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCCGCCTACTCTGCTATAAAGGAAAACCAATCGCGTTAGAGGTTTT GATCTCGCGGCCGGAAAACAGCCTGGTGTACCAAAGTCGCGACGCTGGAT TGCACCCTGGCTGTGAGAACAAGCGCAACATCAGGGTAAACGGCGATGGG TTCGGCATCGCGTGGTACGACAGACCGGCACGGGATTTCCCATGCATCGT CAAGGTGAGCGCTCTTCTGTTGCCGACGCCATTTTCGCGCCGACACGGCA CCGTGGGCAGGTCTCAGGTATTGGAGGCCGTTTCAGACGCAGATCAATGC AGTGAAGCGATGCCCCATTTCGTCCTGCGCGTATCGATCTTTGAGAATCC AGACAGTTTGATTCCTGTCGTTTTAGGCGCCAGAGCATGCTCAATTAGTC TTATGGCTCAACGAAAGAAAGATATGGGCGTCCTAAAGAGAGGTCAGGAT TTCCGCCCCGCGTGGTTCCTGGCTCGCTCTCTTATCGGTTAACGGCATCG TTTCTGGCGTTCTTGTCTCGCGTTCTTGGTCTTCACTTCGTTTTCTTATA TTGGTCGGTCGGTCCTGGCCTATCGATCCGTGGCCAAGTGCGCAGTTTGC GACGCCGGCATGGAGCAGCACCAACCTGCTGGAGCTGTCGCGCTTCATCG ACGCCGGCCTCCTCTTCGCGCATGTCCGTGCGGCCAGCGACGGCAACGAG CTCACGGGTCGCGTCAGGTGCATGTGTTCGGCCTCCCGTCTACCATTGTG TTGATCGTATACGGCGCTCTTGTTCTGTGCTGCTGTCCGTCGCCCAACTG TTGCTTGTTTCTTGCTTCCTGCGGTGGTCGCGCTCTTTATGGTCCCCCTG CGGTTGGTTCTTCCCCCCTTTTGGGAGCCGTCAGCAAACTTTTGTTCACT CTTCTTGGCTCTTAATGTCCTACCCTTCTTCGTCTTTCCCGTGCTTGTTC TGCTTTCTGGATCGCGATAGTTACGAGAATTCGCACCCATTCAAGGTCGG CCGCTACGCATTCATGCACAACGGCGCTGTCGCGACATTTAAGGACATCA AACGTTCCTTGCTAGCCACCTTGCAAGACGAAACGTACGCCACAATCGAG GGAACCACGGATAGCGAGGTGAGACAACACATTTTTCCCTCCCAAATTCT GCACGGCACCGAAGCAGCCGACGCTCTGAGAGGCCAACTGAACTTGGAGT TGAAACTCTTTGAAGGCGGGGCGTAGGGGCGGCGCAGAATAGCTAGCGGC TGCAAGGTAGACTCTAATTGGATCAATTGCGTTCCTTAGCGTAGCATCAC CCGATGCTGGGCGCATTTAAATCGATTTCGCCGTTTCCCTATTTCTTTCC TGGCGTTCCGCAGCTGTGCTTTGCGGTGTTTCTAGACGAGCTCGGGCGCA AAGCGGGCGCCTGCCCCCTCCAGCGCGGTGCTTCCGCAGCCGAGATGGCG GCGGCTCTGGAACAGACGGTCAGACGGATCATCGCGGCGGTGGCGACACA TGACGAGCGAACCGCGCGAGCATCTGGGAGAGCGGCTGGCAGAGCGGCCG GCGCCGCCGGCTGCGGCAGCGCCGCGACGGCCGCGGCGGCGCCATCGGCG GCGGCGCCATCGACTTCGGCAGGAACGACGACACCAGCGTCGAGCCTGAA CCTCTGCGTGACGGATGGACGGTCTATTGTCGCGACGCGGTATCGCAATC ACCCGACGCAGCAGCCGCCGTCGATGTATTACATCACAGGAGAAAGCTTT GTGTGCGACGGCGAAGGCTGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6844:673..2443-

>mRNA_P-wetherbeei_contig6844.1.2 ID=mRNA_P-wetherbeei_contig6844.1.2|Name=mRNA_P-wetherbeei_contig6844.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig6844:673..2443- (Phaeothamnion wetherbeei SAG_119_79)
ATGTGCCGCCTACTCTGCTATAAAGGAAAACCAATCGCGTTAGAGGTTTT
GATCTCGCGGCCGGAAAACAGCCTGGTGTACCAAAGTCGCGACGCTGGAT
TGCACCCTGGCTGTGAGAACAAGCGCAACATCAGGGTAAACGGCGATGGG
TTCGGCATCGCGTGGTACGACAGACCGGCACGGGATTTCCCATGCATCGT
CAAGTTTGCGACGCCGGCATGGAGCAGCACCAACCTGCTGGAGCTGTCGC
GCTTCATCGACGCCGGCCTCCTCTTCGCGCATGTCCGTGCGGCCAGCGAC
GGCAACGAGCTCACGGGTCGCGTCAGTTACGAGAATTCGCACCCATTCAA
GGTCGGCCGCTACGCATTCATGCACAACGGCGCTGTCGCGACATTTAAGG
ACATCAAACGTTCCTTGCTAGCCACCTTGCAAGACGAAACGTACGCCACA
ATCGAGGGAACCACGGATAGCGAGCTGTGCTTTGCGGTGTTTCTAGACGA
GCTCGGGCGCAAAGCGGGCGCCTGCCCCCTCCAGCGCGGTGCTTCCGCAG
CCGAGATGGCGGCGGCTCTGGAACAGACGGTCAGACGGATCATCGCGGCG
GTGGCGACACATGACGAGCGAACCGCGCGAGCATCTGGGAGAGCGGCTGG
CAGAGCGGCCGGCGCCGCCGGCTGCGGCAGCGCCGCGACGGCCGCGGCGG
CGCCATCGGCGGCGGCGCCATCGACTTCGGCAGGAACGACGACACCAGCG
TCGAGCCTGAACCTCTGCGTGACGGATGGACGGTCTATTGTCGCGACGCG
GTATCGCAATCACCCGACGCAGCAGCCGCCGTCGATGTATTACATCACAG
GAGAAAGCTTTGTGTGCGACGGCGAAGGCTGC
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