mRNA_P-wetherbeei_contig6825.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6825.1.1
Unique NamemRNA_P-wetherbeei_contig6825.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A835Z0Q0_9STRA (Organic solute transporter Ostalpha-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q0_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.000e-101
Identity = 182/329 (55.32%), Postives = 219/329 (66.57%), Query Frame = 1
Query:  262 SVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVA-----------------------------------------SLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHDAP---PKTVLTRTFLVGNIDSP-LRKQPPRDFEVEKRADGAAHNRGGGSDN 1113
            +V +LT+RD YEA VVYSF TLILEYAGGDY CTE IK LPPV HP P CCLP VRRDA LLR+ KQG +QFVVVKP+MA+                                          SLAAL  G+YF  A+Q  LL++YN++YS ALYCL+L+YLAI+ LL   +PVQKF AVK+IVF TFWQS+LV LLPG++ EQALLWN+F+LCVE VPF LLLNHAFP+ +F+ N  DK+V +S+R ML+V DV +D  +SF P YQ+YVVARDDHD P   PKT   RTFLVGN+DS  +R  PP        A+G A   GG  D+
Sbjct:   70 AVVVLTLRDVYEAFVVYSFFTLILEYAGGDYNCTEQIKHLPPVRHPPPLCCLPAVRRDAHLLRMTKQGVVQFVVVKPVMALLRGTVWYVWVSIVVMCXXXXXXXXXXXXXXXXXXXXXXXXXLSLAALAGGLYFEPAFQAVLLIVYNITYSMALYCLLLFYLAIQTLLTPFQPVQKFFAVKAIVFATFWQSMLVYLLPGLTAEQALLWNNFLLCVECVPFALLLNHAFPFHDFMTNTADKRVADSMRTMLNVGDVFQDAYHSFMPSYQDYVVARDDHDNPLQQPKTFRARTFLVGNLDSEAMRGAPPA-------AEGGAQGEGGEGDS 391          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: D8LQ46_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ46_ECTSI)

HSP 1 Score: 306 bits (785), Expect = 1.160e-95
Identity = 171/339 (50.44%), Postives = 223/339 (65.78%), Query Frame = 1
Query:  274 LTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHD------------APP----------KTVLTRTFLVGNIDSPLRKQPPRDFEVEKRADGAAHNRGGGSDNXXXXXXXXXXXGGADWADVQM-LDEDWSADVTVLEVE 1221
            L +RDCYEA VVYSFLTLILE+AGGDY C E IK LPPV HP+P CCL  VRRD  LLRL KQ TLQFVVVKP MA+ SL AL  G Y++ ++Q  LLV+YN SYS ALY L+++Y A  PLLA  +PVQKF AVKSI+F T+WQ+V+V  +PG+S+EQ LLWND+++C+E+V F LLLN AFP+ +F++  +DK VL +VR+M++V+DV +D  +SF P YQ+YVVARDD D            A P          + V TRTFL+GN+D     +P    +  +  D + +   GG  +              D  D++  LDEDW  DV V+E++
Sbjct:   80 LIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQNVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLDRGNMSKPTLSTDGTQSTDESDNPAAGGGSHPAKGGRGRLS---VDDEDLEGGLDEDWGHDVNVIELQ 415          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A7R9UBZ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBZ1_9STRA)

HSP 1 Score: 251 bits (640), Expect = 1.430e-75
Identity = 127/261 (48.66%), Postives = 169/261 (64.75%), Query Frame = 1
Query:  277 TIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFV------VNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHDAP-PKTVLTRTFLVGNIDSPLRK 1038
            T+RD +EA ++Y+FL L+LEY GGD  C ++IK   P+ HP+P CCLPP+R+D   LR CKQGTLQFV+VKP+M V  L    RG Y+   YQ  LLVIYN+SY+ ALYCL+L+YLA   LL  H PV KF ++K++VF T+WQ V V+L PG+S E A  WN+FILCVEMV F  LL  AF   E+       +   +K +  S   ++SVKD++ D  ++F P YQ+YV+     D   P     +T+LVGN+D    K
Sbjct:  100 TVRDMFEAFIIYTFLALVLEYCGGDLNCVDSIKHEAPLRHPFPLCCLPPLRKDGRFLRFCKQGTLQFVIVKPLMGVIGLITFSRGQYYRPEYQITLLVIYNISYTLALYCLLLFYLATHKLLEKHNPVLKFFSIKAMVFATYWQGVAVSLSPGISQEDATAWNNFILCVEMVVFSTLLLFAFGVEEYKRKNIEGLGVKNKDLWESFTDVISVKDLIADAYHNFVPAYQDYVLQSGTEDGDEPVRYRAKTYLVGNLDEDKMK 360          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: I2CPF2_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF2_NANGC)

HSP 1 Score: 240 bits (612), Expect = 2.480e-71
Identity = 130/259 (50.19%), Postives = 175/259 (67.57%), Query Frame = 1
Query:  259 TSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFCCLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNANDK-QVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDDHDAP--PKTVLTRTFLVGNIDS 1026
            +SV + T+RD  EA V+YSFL L+LEYAGGD  C + IK  PP+ H +P  CL P+ RD   LR+CKQGTLQFV VKP MA+ SL  L +G++++R YQ ALLVIYN+SYS ALYCL L+Y   K +L  + PV KFLAVKS+VF T+WQS+L+ L  G   E+   WN+FILC+EMV F   L  AF + E+  +  D   VL++++++LSV+DV+ D  ++F P YQ+Y + R D  +    +    RTFL GN D+
Sbjct:   97 SSVGLETVRDMMEAFVIYSFLALVLEYAGGDSACVDRIKNEPPLRHFFPLGCLAPMPRDGRFLRVCKQGTLQFVFVKPTMALVSLIMLAKGLFWSRWYQAALLVIYNLSYSLALYCLALFYTGTKVILRRYSPVAKFLAVKSVVFATYWQSLLLLLWAG--PERVSAWNNFILCIEMVFFSTFLGLAFSHKEYRQSLPDNINVLHNMKEVLSVRDVVADAYHNFMPTYQDYTLHRHDGSSRGNQRKYRARTFLAGNFDA 353          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A2D4CDP9_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDP9_PYTIN)

HSP 1 Score: 229 bits (585), Expect = 1.930e-67
Identity = 117/243 (48.15%), Postives = 167/243 (68.72%), Query Frame = 1
Query:  250 YLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDD 966
            +++ +++  T+RDCYEA VVYSFL L+L +AGG+ VC   +++ P + H WP   CL P+ RD  LLR CK+ TLQFV++KP+ A+ SL  L  G Y T AYQ  L V+YN+SYS ALY L L+YLA K +L    PV KF AVKS++F TFWQS ++  +PG++ EQ+  W DF+LCVEMVPF LL   AF  ++F  N +   D +VL +++++LS+ D++ D  ++F P YQ+Y++ R D
Sbjct:   43 FVNQALYFDTLRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDITHAWPLNRCLHPIARDGRLLRSCKRATLQFVLIKPLFALLSLFMLACGQYHTLAYQLILTVVYNISYSLALYGLWLFYLATKHILKTFNPVLKFFAVKSVIFLTFWQSGMIDFVPGITNEQSFAWKDFVLCVEMVPFALLHFLAFNPSQFKKNLDRLPDSEVLKNMKEVLSLSDIIADAYHNFMPSYQDYMLQRAD 285          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: G4ZK83_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZK83_PHYSP)

HSP 1 Score: 229 bits (585), Expect = 7.550e-66
Identity = 118/241 (48.96%), Postives = 165/241 (68.46%), Query Frame = 1
Query:  250 YLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
            +++ +++  +IRDCYEA VVYSFL L+L +AGG+ VC   +++ P + HPWP   C  PV RD  LLRLCK+ T+QFV +KPI A  SL  L  G Y T AYQ  L+V+YN+SYS ALY L L+YLA + +L    PV KF AVKS+VF TFWQ+ L+  +PG++ EQ   W DFILCVEMVPF  +   AF  ++F  N +   D +VLN+++++LS+ D+L D  ++F P Y++Y++ R
Sbjct:   94 FVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCFEPVGRDGRLLRLCKRATIQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSVALYGLWLFYLATRHILQPFNPVLKFFAVKSVVFLTFWQNSLLDFIPGITNEQTFAWKDFILCVEMVPFAFVHLLAFNSSQFKKNLDRLPDSEVLNNMKEVLSLSDILADAYHNFMPSYRDYMLQR 334          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: K3WXL2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL2_GLOUD)

HSP 1 Score: 228 bits (581), Expect = 2.460e-65
Identity = 118/244 (48.36%), Postives = 165/244 (67.62%), Query Frame = 1
Query:  247 LYLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVARDD 966
            ++++ +++  T RDCYEA VVYSFL L+L +AGG+ VC   ++  P + H WP   CL P+ RD  LLR CK+ T+QFV++KP  A+ SL  L  G Y+T AYQ  L ++YN+SYS ALY L L+YLA K +L    PV KF AVKSIVF TFWQS L+  +PG++ EQ+  W DFILCVEMVPF  L   AF  ++F  N +   D +VL +++++LS+ D++ D  ++F P YQ+YV+ R +
Sbjct:   91 IFVNQALYFDTFRDCYEAFVVYSFLALVLSFAGGESVCVVKMQGEPDITHAWPLSRCLRPIGRDGRLLRSCKRATIQFVLIKPFFALLSLVMLAFGQYYTLAYQLILEIVYNISYSLALYGLWLFYLATKHILKTFNPVLKFFAVKSIVFLTFWQSGLIDFVPGITNEQSFAWKDFILCVEMVPFAFLHFLAFNPSQFKKNLDRLPDSEVLKNMKEVLSLSDLVADAYHNFMPSYQDYVLQRGE 334          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: H3GYJ3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYJ3_PHYRM)

HSP 1 Score: 226 bits (576), Expect = 1.390e-64
Identity = 134/296 (45.27%), Postives = 180/296 (60.81%), Query Frame = 1
Query:   85 IGEFSRASLEASSVGMSFLVALVFPLWDQPSLLCLPRYA*PISFVTLAPSPSPYLYLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
            +  +SR  L+   V     + +V P++   SLL L       SFV  A      LY  +      IRDCYEA VVYSFL L+L +AGG+ VC   +++ P + HPWP   CL P+ RD  LLRLCK+ T+QFV VKPI A  SL  L  G Y T AYQ  L+V+YNVSYS ALY L ++YLA + +L    PV KF AVKS+VF TFWQS L+  +PG++ EQ   W D ILCVEMVPF  +   AF   +F  N +   D +VL +++++LS+ D+L D  ++F P Y++Y++ R
Sbjct:   62 LAHYSRPQLQRYIVR----ILVVVPVYALGSLLSL-------SFVNQA------LYFDS------IRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCLDPLGRDGRLLRLCKRATIQFVFVKPIFAALSLLMLACGKYHTLAYQLILVVVYNVSYSLALYGLWIFYLATRHILQPFNPVLKFFAVKSVVFLTFWQSSLLDFIPGITNEQTFAWKDLILCVEMVPFAFVHLLAFNSNQFKKNLDRLPDSEVLKNMKEVLSLSDILADAYHNFMPSYRDYMLQR 334          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: A0A3F2RFZ8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFZ8_9STRA)

HSP 1 Score: 225 bits (573), Expect = 3.820e-64
Identity = 117/241 (48.55%), Postives = 165/241 (68.46%), Query Frame = 1
Query:  250 YLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
            +++ +++  +IRDCYEA VVYSFL L+L +AGG+ VC   ++  P + HPWP   CL PV RD  LLR CK+ TLQFV +KPI A  SL  L  G Y T AYQ  L+V+YN+SYS ALY L ++YLA K +L    PV KF AVKS+VF TFWQS L++ +PG++ EQ+  W DFILC+EMVPF ++   AF   +F  N +   D +VL +++++LS+ D++ D  ++F P Y++Y++ R
Sbjct:   94 FVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQGEPDIRHPWPLNRCLDPVGRDGRLLRSCKRATLQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSMALYGLWVFYLATKHILQPFNPVIKFFAVKSVVFLTFWQSSLLSFVPGITNEQSFAWKDFILCLEMVPFAVIHLAAFNSNQFKKNLDRLPDSEVLKNMKEVLSLSDIVADAYHNFMPSYRDYMLQR 334          
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Match: D0P033_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0P033_PHYIT)

HSP 1 Score: 225 bits (573), Expect = 6.400e-64
Identity = 129/323 (39.94%), Postives = 190/323 (58.82%), Query Frame = 1
Query:    4 HELRNTYFAFSA*CRSTRYAVAFLSASIGEFSRASLEASSVGMSFLVALVFPLWDQPSLLCLPRYA*PISFVTLAPSPSPYLYLSTSVWILTIRDCYEAAVVYSFLTLILEYAGGDYVCTEAIKTLPPVCHPWPFC-CLPPVRRDAGLLRLCKQGTLQFVVVKPIMAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLAAHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVPFGLLLNHAFPYTEFVVNAN---DKQVLNSVRQMLSVKDVLEDLQYSFKPVYQNYVVAR 960
            H   +   AF     +T  +V  +   +  +SR  L+   V     + ++ P++   SLL L                   ++++ +++  +IRDCYEA VVYSFL L+L +AGG+ VC   +++ P + HPWP   C  P+ RD  LLRLCK+ T+QFV +KPI A  SL  L  G Y T AYQ  L V+YN+SYS ALY L ++YLA + +L    PV KF AVKS+VF TFWQ+ L+  +PG++ EQ   W DFILCVEMV F  +   AF  ++F  N +   D +VLN+++++LS+ D+L D  ++F P Y++Y++ R
Sbjct:   53 HRASSLLIAFGCCVLATLLSVYNIVQHLAHYSRPQLQRYIVR----ILVIVPVYAMGSLLSL-------------------MFVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPINRCFDPLGRDGRLLRLCKRATIQFVFIKPIFAALSLLMLACGKYHTLAYQLILAVVYNISYSLALYGLYIFYLATRHILQPFNPVLKFFAVKSVVFLTFWQNSLLDFIPGITNEQTFAWKDFILCVEMVLFAFVHLLAFNSSQFKKNLDRLPDSEVLNNMKEVLSLSDILADAYHNFMPSYKDYMLQR 352          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6825.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0Q0_9STRA1.000e-10155.32Organic solute transporter Ostalpha-domain-contain... [more]
D8LQ46_ECTSI1.160e-9550.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9UBZ1_9STRA1.430e-7548.66Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
I2CPF2_NANGC2.480e-7150.19Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A2D4CDP9_PYTIN1.930e-6748.15Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
G4ZK83_PHYSP7.550e-6648.96Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
K3WXL2_GLOUD2.460e-6548.36Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GYJ3_PHYRM1.390e-6445.27Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3F2RFZ8_9STRA3.820e-6448.55Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
D0P033_PHYIT6.400e-6439.94Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6825contigP-wetherbeei_contig6825:554..3255 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQ46
Preferred nameTMEM184B
PFAMsSolute_trans_a
Model size1469
Max annot lvl2759|Eukaryota
KEGG koko:K01414
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005886,GO:0006950,GO:0006952,GO:0007275,GO:0007399,GO:0007530,GO:0008037,GO:0008038,GO:0008039,GO:0008150,GO:0008201,GO:0009605,GO:0009607,GO:0009620,GO:0009987,GO:0010008,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0018992,GO:0022008,GO:0022414,GO:0030141,GO:0030154,GO:0030182,GO:0030246,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031410,GO:0031901,GO:0031982,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0048468,GO:0048471,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050832,GO:0050896,GO:0051046,GO:0051049,GO:0051704,GO:0051707,GO:0065007,GO:0071944,GO:0097367,GO:0097708,GO:0098542,GO:0098588,GO:0098805,GO:0099503,GO:1901681
Exons6
Evalue3.92e-56
EggNOG OGsKOG2641@1|root,KOG2641@2759|Eukaryota
EC3.4.24.70
Descriptionnegative regulation of brassinosteroid mediated signaling pathway
Cds size894
COG categoryS
BRITEko00000,ko01000,ko01002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6825.1.1prot_P-wetherbeei_contig6825.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6825 1334..3175 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186940.0910242-UTR-P-wetherbeei_contig6825:553..9761683186940.0910242-UTR-P-wetherbeei_contig6825:553..976Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6825 554..976 +
1683186940.1261017-UTR-P-wetherbeei_contig6825:1261..13331683186940.1261017-UTR-P-wetherbeei_contig6825:1261..1333Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6825 1262..1333 +
1683186940.1925926-UTR-P-wetherbeei_contig6825:3175..32551683186940.1925926-UTR-P-wetherbeei_contig6825:3175..3255Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6825 3176..3255 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186940.1401186-CDS-P-wetherbeei_contig6825:1333..14621683186940.1401186-CDS-P-wetherbeei_contig6825:1333..1462Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6825 1334..1462 +
1683186940.1549406-CDS-P-wetherbeei_contig6825:1657..18221683186940.1549406-CDS-P-wetherbeei_contig6825:1657..1822Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6825 1658..1822 +
1683186940.1640363-CDS-P-wetherbeei_contig6825:2127..22231683186940.1640363-CDS-P-wetherbeei_contig6825:2127..2223Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6825 2128..2223 +
1683186940.1752827-CDS-P-wetherbeei_contig6825:2422..25961683186940.1752827-CDS-P-wetherbeei_contig6825:2422..2596Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6825 2423..2596 +
1683186940.1837385-CDS-P-wetherbeei_contig6825:2845..31751683186940.1837385-CDS-P-wetherbeei_contig6825:2845..3175Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6825 2846..3175 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6825.1.1

>prot_P-wetherbeei_contig6825.1.1 ID=prot_P-wetherbeei_contig6825.1.1|Name=mRNA_P-wetherbeei_contig6825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=298bp
MAVASLAALGRGVYFTRAYQTALLVIYNVSYSTALYCLVLYYLAIKPLLA
AHKPVQKFLAVKSIVFFTFWQSVLVTLLPGVSTEQALLWNDFILCVEMVP
FGLLLNHAFPYTEFVVNANDKQVLNSVRQMLSVKDVLEDLQYSFKPVYQN
YVVARDDHDAPPKTVLTRTFLVGNIDSPLRKQPPRDFEVEKRADGAAHNR
GGGSDNDNGEREGSGNGGGADWADVQMLDEDWSADVTVLEVEQMRRAEAA
AARGGGAAVRGRRDGGGGGGGERRGRGAGEPLGESLEAPPIRQRALV*
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mRNA from alignment at P-wetherbeei_contig6825:554..3255+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6825.1.1 ID=mRNA_P-wetherbeei_contig6825.1.1|Name=mRNA_P-wetherbeei_contig6825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2702bp|location=Sequence derived from alignment at P-wetherbeei_contig6825:554..3255+ (Phaeothamnion wetherbeei SAG_119_79)
CACCACGAACTCAGAAATACATATTTCGCATTCTCGGCATAGTGCCGGTC TACGCGGTATGCAGTTGCATTTCTGTCTGCATCAATAGGTGAGTTTTCCA GGGCCTCGCTGGAAGCAAGCAGCGTCGGCATGAGTTTCTTAGTAGCTCTA GTTTTCCCCCTGTGGGATCAACCAAGCCTGCTATGCTTGCCAAGGTATGC GTGACCTATTTCCTTTGTCACTCTCGCCCCCTCCCCCTCACCCTACCTCT ACCTCAGCACATCCGTGTGGATCCTGACGATCCGGGATTGCTATGAGGCC GCCGTGGTCTATTCGTTCTTGACCCTCATCCTTGAATATGCTGGCGGGGA TTACGTCTGCACTGAGGCAATAAAGACGCTCCCTCCGGTTTGTCACCCTT GGCCCTTCTGCTGCCTGCCACCGGTAAGGCGCATGTTGAAGGGCAGAATT GCAAATTCGGAAAAGCGGAAAGGAAAGTTCACTGAGCATTCTTTCGTTCA CAGTTTTATGTTGCTTTGCAATGCGGTGGAAACGAAAGAGGCTCTTATTC TTCTTTGAAAGATCGGTGCGCACCACGCAGCTAACTAACTGTAAGCCTGC CAACAGAGGCAAATAACCGACGGCGCTCTTGGACAGCGTTTCAATCAATA CAATCACAACCGCCGCCGCCGCCGCCGCCGTCGTCGTCGCCGCCGCCGCC AACTCCAGGTTCGGCGGGACGCCGGGTTGCTGCGGCTGTGCAAGCAGGGC ACTCTGCAGTTCGTGGTGGTGAAGCCCATCATGGCGGTGGCGTCGCTGGC GGCGCTCGGGAGGGGCGTCTACTTCACGCGGGCCTATCAGACGGCGCTGC TCGTCATCTACAACGTGTCATATTCGACGGCGCTCTATTGCCTCGTCCTC TACTACCTGGTCAATCAAGTGTTTTTTTGATTTGGTGCAGATATATTTTG CTCACTTTCTTTAGAATGCTCGTTAGTTTTATACTCGTTTCTCTATATTT TAGTGTAAGTCGAGCTCTAGTATTCTAAACCTTTCTTACCTGTTCGTTCT TCTTTCGTTTCCCCTGCTCGCTTCCTGCATCGACCGTTGCATATCTATCA TCAGGCTATAAAACCGCTGCTGGCGGCGCACAAACCGGTGCAGAAGTTTC TGGCAGTAAAATCAATCGTCTTCTTTACCTTCTGGCAGAGCGTTCTTGTC ACGCTGCTGCCGGGGGTCTCCACGGAGCAGGCACTGCTCTGGAACGATTT CATCCTCTGCGTCGAAATGGTGCGCTGCTTGCATACTGTGCTGCTGGTTG TGTTTTATCCGGTTTGTTCTTTGCTGCGGTAGTTTCGCTGTGGAATTTGG GTGCGCCCTTACAAGGATTTGCTACCAGGTTTGCTCAGGGGTGCCACACC ACCAGGAAAAGAGGATATATGGGAAGGAGTGGAGTTTCGCTGCGACGGTG CACTGCATTCGCTCCCTTTGTTGCGAATAAAGGATGCCTTTTGTATGGTC CCCCTGCTGTTGTCGGTTGACCTTTCTGAGTTCTTATTACGCCACGTCAC CTTCGCATCACTTGAATGATGCAGGTCCCGTTCGGACTTCTGCTCAACCA CGCCTTTCCCTACACGGAATTCGTCGTGAACGCCAACGACAAACAAGTGC TGAACAGCGTCAGGCAAATGGTGAGCTCAGTAGTCGCGCTTTCCCGTTCA TCCCTCAGTCTTCGGTATTCCCTGAGGTTTGTAATAGTTCGCCGTGTGAA TTGCTGTTGGTGCGGATTGGCGCCGCATTATAATCCAACGATGTCGATTA AATCACTTGAACAAGATCTCTAACGCCCCTTGCCTCGTCTTTCCTGCCGT CCGGCCCCTTCTGCCGCAGCTTTCCGTGAAGGACGTACTGGAAGACTTGC AGTATTCCTTCAAGCCGGTTTATCAAAACTACGTCGTCGCGAGAGACGAC CACGACGCACCGCCGAAGACGGTGCTGACGCGGACGTTCCTCGTCGGGAA CATCGACTCGCCCTTGCGGAAACAACCGCCGAGAGACTTCGAGGTGAGCT CGGCAGCGGGGTGCATAAAGGGACGCAATTGGTGTTAGAGAGCTGCGTCG CTCCCAACAGAGTTCTTGTACGTAGTGCTGCATGCCTCATCTTTCAGGCG AAAACTCTTCATTGGCAGCTCTATGAAATTGATCCCGAGAAGTTCCCCCC TTCTTTCGAATCGTTGGCCTCTTGGCCTTTCCTTCCTTCTTTCCTGCATG ATGGATGTCGTTTTCGTTGCCCGTCCCCCTTCTCGATATCAGGTGGAAAA GCGGGCCGACGGCGCCGCCCACAATCGCGGAGGCGGCAGCGACAACGACA ACGGAGAACGTGAAGGCAGCGGCAACGGCGGCGGTGCGGACTGGGCTGAC GTTCAGATGCTAGACGAAGACTGGTCGGCGGATGTAACGGTTCTCGAGGT GGAGCAGATGCGGCGGGCCGAGGCAGCGGCGGCACGAGGTGGCGGGGCGG CGGTTAGGGGAAGGCGCGACGGCGGCGGCGGCGGCGGCGGCGAAAGGAGG GGAAGAGGAGCAGGAGAGCCACTGGGGGAGAGCTTGGAGGCGCCGCCAAT ACGACAGAGAGCGCTTGTATGAAAAGATAGAAAGGTGCACTTTTGCTGCT TGTAAATATGTAGACACAGCCCGTACAAATAATCTGAAATAAAGTTGAGG CA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6825:554..3255+

>mRNA_P-wetherbeei_contig6825.1.1 ID=mRNA_P-wetherbeei_contig6825.1.1|Name=mRNA_P-wetherbeei_contig6825.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=894bp|location=Sequence derived from alignment at P-wetherbeei_contig6825:554..3255+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGTGGCGTCGCTGGCGGCGCTCGGGAGGGGCGTCTACTTCACGCG
GGCCTATCAGACGGCGCTGCTCGTCATCTACAACGTGTCATATTCGACGG
CGCTCTATTGCCTCGTCCTCTACTACCTGGCTATAAAACCGCTGCTGGCG
GCGCACAAACCGGTGCAGAAGTTTCTGGCAGTAAAATCAATCGTCTTCTT
TACCTTCTGGCAGAGCGTTCTTGTCACGCTGCTGCCGGGGGTCTCCACGG
AGCAGGCACTGCTCTGGAACGATTTCATCCTCTGCGTCGAAATGGTCCCG
TTCGGACTTCTGCTCAACCACGCCTTTCCCTACACGGAATTCGTCGTGAA
CGCCAACGACAAACAAGTGCTGAACAGCGTCAGGCAAATGCTTTCCGTGA
AGGACGTACTGGAAGACTTGCAGTATTCCTTCAAGCCGGTTTATCAAAAC
TACGTCGTCGCGAGAGACGACCACGACGCACCGCCGAAGACGGTGCTGAC
GCGGACGTTCCTCGTCGGGAACATCGACTCGCCCTTGCGGAAACAACCGC
CGAGAGACTTCGAGGTGGAAAAGCGGGCCGACGGCGCCGCCCACAATCGC
GGAGGCGGCAGCGACAACGACAACGGAGAACGTGAAGGCAGCGGCAACGG
CGGCGGTGCGGACTGGGCTGACGTTCAGATGCTAGACGAAGACTGGTCGG
CGGATGTAACGGTTCTCGAGGTGGAGCAGATGCGGCGGGCCGAGGCAGCG
GCGGCACGAGGTGGCGGGGCGGCGGTTAGGGGAAGGCGCGACGGCGGCGG
CGGCGGCGGCGGCGAAAGGAGGGGAAGAGGAGCAGGAGAGCCACTGGGGG
AGAGCTTGGAGGCGCCGCCAATACGACAGAGAGCGCTTGTATGA
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