mRNA_P-wetherbeei_contig6819.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: A0A1X6NWJ4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWJ4_PORUM) HSP 1 Score: 62.4 bits (150), Expect = 1.910e-9 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 37 KQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANVDAIP--ALDRIPALSAEAA 255
+QFP L+ + + + A AS+ + ER+FWIAGRL++P+R+SL +EM + AN D +P A IP+L+ AA
Sbjct: 423 QQFPALFPLAASAIGAAASSASCEREFWIAGRLVRPERSSLSVTSVEMHSLVAANADVLPTDAPQCIPSLTHAAA 497
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: A0A1X6P0L4_PORUM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0L4_PORUM) HSP 1 Score: 62.0 bits (149), Expect = 2.620e-9 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 1
Query: 4 DALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANVDAIPA-LDRIPALS-AEAA 255
DAL W H QFP L++V +V A S+ + ER+F+IAGRL+ DR+SL +EM + +N D +P +P+LS AEAA
Sbjct: 278 DALEFWRTHRA-QFPALFVVAGSVFGAVGSSASCEREFYIAGRLVAGDRSSLSTGSVEMHSLVSSNADLLPFNTASVPSLSHAEAA 362
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: A0A1X6NWM3_PORUM (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWM3_PORUM) HSP 1 Score: 55.1 bits (131), Expect = 7.280e-7 Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANVDAIPA-LDRIPAL 240
+ ALG W + L++V C++L AP S+ A ERDF +AG +++ DR++L H+EM ++ N +P+ L IP L
Sbjct: 493 DGALGFWAARR-DDYTLLHLVACSLLGAPGSSFASERDFSVAGLVLRKDRSTLLAEHVEMHCLVRFNAHLLPSDLSLIPRL 572
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: A0A0P1AKL2_PLAHL (Ribonuclease H-like domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKL2_PLAHL) HSP 1 Score: 49.3 bits (116), Expect = 2.790e-5 Identity = 31/83 (37.35%), Postives = 44/83 (53.01%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANVDAIPALDRIPALSAE 249
+D L + +FP L V + AS +ERDF IAG L+ P RT+L + +EM LFL N + IP D IP + ++
Sbjct: 8 QDVLDGFCIKHQGRFPHLAAVARCIFGNSASAAGIERDFEIAGVLLNPRRTNLDTFVVEMILFLYINGEHIP-WDDIPLIDSK 89
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: UPI000E4143A9 (zinc finger BED domain-containing protein 1-like n=1 Tax=Astatotilapia calliptera TaxID=8154 RepID=UPI000E4143A9) HSP 1 Score: 49.7 bits (117), Expect = 5.080e-5 Identity = 25/68 (36.76%), Postives = 36/68 (52.94%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANV 204
ED L W H + FP+L + L PAS+ ER F +G ++ RT L+PW + M +FL N+
Sbjct: 210 EDPLAWWKLHKMT-FPQLSKLARKYLCIPASSSPSERLFSTSGNIVTCQRTCLKPWRVNMLVFLNKNL 276
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: A0A0P1AQK6_PLAHL (Ribonuclease H-like domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQK6_PLAHL) HSP 1 Score: 49.7 bits (117), Expect = 5.570e-5 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 1 EDAL-GKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANVDAIPALDRIPALSAE 249
+D L G W KH + FP L V A T +ERDF IAG L+ P R +L + +EM LFL N + P D IP ++++
Sbjct: 231 QDVLDGFWIKHQGR-FPRLAAVARYTFGNSALTAGIERDFGIAGVLLNPRRNNLDTFVVEMILFLNINGEHTP-WDDIPLINSK 312
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: UPI000E40E102 (zinc finger BED domain-containing protein 1-like n=4 Tax=Pseudocrenilabrinae TaxID=318546 RepID=UPI000E40E102) HSP 1 Score: 49.7 bits (117), Expect = 5.720e-5 Identity = 25/68 (36.76%), Postives = 36/68 (52.94%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANV 204
ED L W H + FP+L + L PAS+ ER F +G ++ RT L+PW + M +FL N+
Sbjct: 428 EDPLAWWKLHKMT-FPQLSKLARKYLCIPASSSPSERLFSTSGNIVTCQRTCLKPWRVNMLVFLNKNL 494
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: UPI000D315D64 (zinc finger BED domain-containing protein 1-like n=7 Tax=Haplochromini TaxID=319058 RepID=UPI000D315D64) HSP 1 Score: 49.7 bits (117), Expect = 5.880e-5 Identity = 25/68 (36.76%), Postives = 36/68 (52.94%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANV 204
ED L W H + FP+L + L PAS+ ER F +G ++ RT L+PW + M +FL N+
Sbjct: 559 EDPLAWWKLHKMT-FPQLSKLARKYLCIPASSSPSERLFSTSGNIVTCQRTCLKPWRVNMLVFLNKNL 625
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: UPI000904D80F (zinc finger BED domain-containing protein 1-like n=4 Tax=Pseudocrenilabrinae TaxID=318546 RepID=UPI000904D80F) HSP 1 Score: 49.3 bits (116), Expect = 7.320e-5 Identity = 25/68 (36.76%), Postives = 36/68 (52.94%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFLKANV 204
ED L W H + FP+L + L PAS+ ER F +G ++ RT L+PW + M +FL N+
Sbjct: 240 EDPLAWWKLHKMT-FPQLSKLARKYLCIPASSSPSERLFSTSGNIVTCQRTCLKPWRVNMLVFLTKNL 306
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Match: H3ACA1_LATCH (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3ACA1_LATCH) HSP 1 Score: 49.3 bits (116), Expect = 7.630e-5 Identity = 23/64 (35.94%), Postives = 40/64 (62.50%), Query Frame = 1
Query: 1 EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRTSLRPWHIEMSLFL 192
+D L W +H + +P+L ++ +VL P S+ + ER+F +AGR+I R+ L+P ++ LFL
Sbjct: 315 QDLLNWWKEHSIV-YPKLSMLARSVLCIPTSSSSSERNFSVAGRMIDQRRSVLKPLTVDSILFL 377 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6819.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6819.1.1 >prot_P-wetherbeei_contig6819.1.1 ID=prot_P-wetherbeei_contig6819.1.1|Name=mRNA_P-wetherbeei_contig6819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=85bp EDALGKWNKHDVKQFPELYIVVCTVLAAPASTGALERDFWIAGRLIQPDRback to top mRNA from alignment at P-wetherbeei_contig6819:133..387- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6819.1.1 ID=mRNA_P-wetherbeei_contig6819.1.1|Name=mRNA_P-wetherbeei_contig6819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig6819:133..387- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6819:133..387- >mRNA_P-wetherbeei_contig6819.1.1 ID=mRNA_P-wetherbeei_contig6819.1.1|Name=mRNA_P-wetherbeei_contig6819.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=255bp|location=Sequence derived from alignment at P-wetherbeei_contig6819:133..387- (Phaeothamnion wetherbeei SAG_119_79)back to top |