mRNA_P-wetherbeei_contig6814.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6814.1.1
Unique NamemRNA_P-wetherbeei_contig6814.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A7S3HTQ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTQ6_9STRA)

HSP 1 Score: 273 bits (698), Expect = 3.650e-85
Identity = 158/290 (54.48%), Postives = 194/290 (66.90%), Query Frame = 1
Query:    1 MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWDGFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVR-EKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGG-EMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            MP IT DL+R++AEHNEG+I TLEE+SLHQEE+ESINE LG  CR+LKILYLQNNII +MENL HMK+L YLNLALNN+TKI GL +CEFL KLDLTVNF+DLD LK+S+DHL SR  L +LYM+GNP +  W  F  YV+A+L QL++LDG EITRS +I A Q+LPALE EL+  A+ VR EK+A A                                  A P  +    ANG   E  ++E  G+ D   EMT +TPE R ++Y ELAQQK+EKE+R    AP+ R
Sbjct:   25 MPLITRDLLRKRAEHNEGMISTLEEISLHQEELESINEVLGMTCRKLKILYLQNNIISKMENLFHMKDLVYLNLALNNVTKIEGLHNCEFLGKLDLTVNFIDLDELKDSIDHLQSRTNLHDLYMMGNPSEHNWPNFKHYVIAKLPQLQNLDGTEITRSMQIQARQKLPALEIELEKLASAVRTEKRAKAII-----------------------------TEQAKPAPSVTTYANGVTIEDVDEEAEGSNDQSQEMTDNTPETRVRIYQELAQQKKEKEDRANVNAPKKR 285          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A835Z7F5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7F5_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.430e-83
Identity = 153/287 (53.31%), Postives = 180/287 (62.72%), Query Frame = 1
Query:    4 PQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWDGFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            P I+++L+RR+AEHNEGLIHTLEE+SLHQEEIE IN+ LG NCR LKILYLQNNII +MENLHH+KELEYLNLALNNIT I GL SCE LNKLDLTVNF+DLD L+ES++HLAS   L++LYM+GNP QA W+GF  YV   L QLE LDGREITRS RI A Q+LPAL+AE Q        +K    AE                                                             E T HTPE RT++Y ELA+QKREK+ERQ+   P++R
Sbjct:    3 PVISLELVRRRAEHNEGLIHTLEEISLHQEEIERINDVLGKNCRHLKILYLQNNIINKMENLHHLKELEYLNLALNNITIIEGLGSCEMLNKLDLTVNFIDLDKLQESIEHLASCPNLKDLYMMGNPAQANWEGFAAYVTGILSQLERLDGREITRSMRITAQQQLPALKAEYQA-------QKLEQTAE-------------------------------------------------------------ETTPHTPEVRTQIYRELAEQKREKDERQRENLPKER 221          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: D7FT33_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT33_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.680e-80
Identity = 158/294 (53.74%), Postives = 190/294 (64.63%), Query Frame = 1
Query:    7 QITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWDGFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEE--------GGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            +ITIDLIRR+AEHNEGLIHTLEELSLHQEE+ESI++TLG NCRRLKILYLQNNIIG+M+NLHHMKELEYLNLAL                KLDLTVNFVD+D L+ SV  +     L++LYM+GNPCQ+ W GF  Y +ARL QLE LDG+EITR+ RI A QRLPAL  E+   A EVR++K                          D   SR     A    T PA+++G+  + G D           G G+  E+T+HTPEART +Y E+A+QKREKEERQK   P+DR
Sbjct:    4 KITIDLIRRRAEHNEGLIHTLEELSLHQEELESIDDTLGCNCRRLKILYLQNNIIGKMQNLHHMKELEYLNLALXXXXXXXXXXXXXXXXKLDLTVNFVDMDELENSVSAMEGNRHLKDLYMMGNPCQS-WAGFEAYTIARLPQLERLDGKEITRTDRIKAQQRLPALRKEIPLLAQEVRQRKLAEKEAAKLESQEKHDGNNNS-----DNEHSRGGGVDADDHPTAPAKSDGATDQPGHDARPSGTDKSCDGKGEEEELTKHTPEARTAIYREMAEQKREKEERQKENLPKDR 291          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A7S4E455_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E455_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.840e-75
Identity = 139/288 (48.26%), Postives = 182/288 (63.19%), Query Frame = 1
Query:    1 MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWDGFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            M ++T+ LIR++AEHNEG+I TLEEL+LHQEE+ +I   LG+ CR+LKILYLQNNII ++++LHH+K+LEYLN+ALNN++KI GL  CEFLNKLDLTVNFVD+D L+ S+DHLA R  L++LYM+GNPC+A W GF +YV+ARL QL+ LDG  ITRS +IIA Q+LP L  EL+  A E R++KA                         +KA   P +R+A        R                           + R KMY ELA++K EKE R+    PR+R
Sbjct:   24 MNRMTLKLIRKRAEHNEGIISTLEELTLHQEELVAIEPCLGTTCRKLKILYLQNNIISKIQHLHHLKDLEYLNMALNNVSKIEGLDKCEFLNKLDLTVNFVDVDELESSMDHLADREHLKDLYMMGNPCEANWPGFKNYVIARLPQLQFLDGEAITRSMQIIAKQQLPKLAVELRSLAQEKRDEKAQKE------------FVDYRDIDTDEKAPYTPEVRYAASFDASRRRLA----------------------IPTQVRLKMYEELAEEKAEKENRELRRQPRER 277          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A7S2CFI3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFI3_9STRA)

HSP 1 Score: 221 bits (563), Expect = 2.820e-69
Identity = 113/174 (64.94%), Postives = 132/174 (75.86%), Query Frame = 1
Query:    1 MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWD-GFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAE 519
            MP +T  LIR++AEHNEG+I +LEE+SLHQEE+E I E LG+ CR+LKI+YLQNNII +MENLHH+KELEYLNLALNNI            NKLDLTVNF+D D L+ES+D L SR  LRELYM+GNP Q  WD GF DYV+ RL QLESLDG  IT+S RI+A Q  P LE E
Sbjct:    1 MPHLTRALIRKRAEHNEGIISSLEEISLHQEELEGIREVLGTTCRKLKIVYLQNNIIPKMENLHHLKELEYLNLALNNIXXXXXXXXXXXXNKLDLTVNFIDFDHLEESIDQLVSRQHLRELYMMGNPSQMDWDPGFKDYVIHRLPQLESLDGTHITKSMRIVAAQAYPRLEGE 174          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A662WUB0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WUB0_9STRA)

HSP 1 Score: 231 bits (589), Expect = 5.370e-69
Identity = 141/289 (48.79%), Postives = 189/289 (65.40%), Query Frame = 1
Query:    1 MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWD-GFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            MP+IT++L+R++AEHNEG+I TLEE+SLHQEE+E I E +G+ CR+L+ILYLQNNII +ME+L HMKEL YLNLALNNI+KI GLQ CEFLNKLDLTVNFVD D L++S+DHL     LRELYM+GNPCQ+ W+ GF +YV+A L QL+ LDG+EI RS RI A Q     +  ++  A +V ++K       XXXXXX             D +        ++ ++ +    +  N +             E   +TP  R +MYME+A+QK E+E R++   PR+R
Sbjct:    1 MPRITVELLRKRAEHNEGIISTLEEISLHQEELEKI-EVIGTLCRKLQILYLQNNIIEKMEDLTHMKELRYLNLALNNISKIEGLQCCEFLNKLDLTVNFVDFDTLEDSIDHLKPLQHLRELYMLGNPCQSDWETGFREYVIASLPQLQLLDGKEIQRSDRIKALQVFRVRQQYVRKEAKKVLDRKXXXXXXXXXXXXXEDEAIEIVSGEATDIS--------SVEVVEEVDSQHSKNKKKS------VMASKEKVPYTPHTRREMYMEMAEQKEEEEARRRENQPRER 274          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A6A3GCM2_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GCM2_9STRA)

HSP 1 Score: 221 bits (564), Expect = 7.850e-68
Identity = 136/279 (48.75%), Postives = 174/279 (62.37%), Query Frame = 1
Query:   31 RKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWD-GFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            ++AEHNEG+I TLEE+SLHQEE+E I E +G+ CR+L+ILYLQNNII +ME+L HMKEL YLN+ALNNI KI GLQSCEFLNKLDLTVNFVD D L+ES+DHL     LRELYM+GNPCQA W+ GF ++VVA L QLE LDG+EI RS RI A Q     +  ++  A +VR KK     E                          P+    + L      A   + E  E ++       E   +TP  R +MY+E+A+QK E+E R++   P++R
Sbjct:    1 KRAEHNEGIISTLEEISLHQEELEKI-EVIGTLCRKLRILYLQNNIIDKMEDLTHMKELRYLNVALNNIRKIEGLQSCEFLNKLDLTVNFVDFDTLEESIDHLKPLRHLRELYMLGNPCQANWESGFREFVVASLPQLEILDGKEIHRSDRIKALQVFRDRQKFVRSEARKVRAKKELERKE------------------------ENPQEEDEV-LEVVGGEATDISEEQVEKKKKSVMASTEKVPYTPHTRREMYLEMAEQKEEEEARRRENQPKER 253          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: W7TJA0_9STRA (Leucine-rich repeat containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJA0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.000e-65
Identity = 137/308 (44.48%), Postives = 179/308 (58.12%), Query Frame = 1
Query:    1 MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNP-------------CQATWD-------GFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            MP+IT DL+R++AEHNEG++ TLEEL+LHQEE+E IN+ LG  CR +KILYLQNN++ R+ENLHH+K LEYLN+ALNNI+ + GL SCEFL KLDLTVNF+D D L+ S+ HLAS   LR+LY +GNP             C+A  D        F  Y+  RL QL+ LDG+EITR+ R++A +  P LE  L+  A   R +K   A +                     ++C+                       SG  E  GT DG   T H PE R  +Y+E+A QK+EK ERQ+A  P+ R
Sbjct:    1 MPEITRDLLRKRAEHNEGILTTLEELALHQEELEGINDILGKTCREIKILYLQNNLLPRIENLHHLKCLEYLNVALNNISVVEGLGSCEFLRKLDLTVNFIDFDALEASITHLASLRHLRDLYFLGNPAQTRPWFEDEEVKCEAVVDKMLDKKQAFTYYIAHRLPQLQCLDGQEITRTTRLLAARVFPTLETRLRVLATRTRCEKEGKAKKAIKDT----------------ESCAS----------------------SGPVENDGT-DGSMPTSHDPETRRAIYLEIAAQKKEKLERQRADGPKKR 269          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: A0A024GMQ1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GMQ1_9STRA)

HSP 1 Score: 215 bits (547), Expect = 1.590e-63
Identity = 111/184 (60.33%), Postives = 142/184 (77.17%), Query Frame = 1
Query:    1 MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATW-DGFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQGRAAEVRE 549
            MP IT +L+R++AEHNEG++ TLEE+SLHQEEIE I + +G+ CR+L+I+YLQNNII  MENL H+K+L YLNLALNNI +I+GL SCEFL KLDLTVNF+D D L++SV+HL     L+ELYM+GNPCQ+ W DGF +YV+A L QL  LDG+EI RS RIIA Q     + EL+     +R+
Sbjct:    1 MPPITPELLRKRAEHNEGMLSTLEEISLHQEEIEKI-DLIGTLCRKLRIVYLQNNIISEMENLIHLKDLRYLNLALNNIKQIKGLHSCEFLEKLDLTVNFIDFDSLQQSVEHLKPLGHLKELYMLGNPCQSNWPDGFREYVIASLPQLCFLDGKEIERSDRIIANQNWRQRDKELKSHLGALRD 183          
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Match: F0YAK5_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YAK5_AURAN)

HSP 1 Score: 211 bits (536), Expect = 5.370e-63
Identity = 131/286 (45.80%), Postives = 163/286 (56.99%), Query Frame = 1
Query:   10 ITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKILYLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNFVDLDVLKESVDHLASRHRLRELYMVGNPCQATWDGFNDYVVARLQQLESLDGREITRSARIIACQRLPALEAELQG-RAAEVREKKATAAAEVXXXXXXXXXXXXXXXXXXXDKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGDGGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR 864
            IT +LIR++AEHNEG+I TLEEL+LHQEE+ +I   LG+ CR+LKILYLQNNII +MENLHHMK+LEYLNLA                     TVNFVD+D L+ES+D+LASR  LR+LYM+GNP Q  W GF +YVVARL QL+ +DG  ITR  RI+A Q+LP L  EL+G  AA+  EKKA A  +                                                          D  E   +TPE RTKMY E+A+QK EK+ +Q AM P++R
Sbjct:    1 ITRELIRKRAEHNEGVISTLEELTLHQEELLAIAPCLGTICRKLKILYLQNNIISKMENLHHMKDLEYLNLAXXXXXXXXXXXXXXXXXXXXXTVNFVDVDALEESMDNLASRIHLRDLYMMGNPAQVDWPGFKNYVVARLPQLKFVDGEPITRGVRIVAEQQLPKLSVELRGLAAAKAAEKKAKAPVDYRDL------------------------------------------------------DVDEAAPYTPEVRTKMYEEVAEQKAEKDHKQNAMKPKER 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6814.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3HTQ6_9STRA3.650e-8554.48Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A835Z7F5_9STRA1.430e-8353.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FT33_ECTSI2.680e-8053.74Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A7S4E455_9STRA2.840e-7548.26Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2CFI3_9STRA2.820e-6964.94Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A662WUB0_9STRA5.370e-6948.79Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A6A3GCM2_9STRA7.850e-6848.75Uncharacterized protein (Fragment) n=2 Tax=Phytoph... [more]
W7TJA0_9STRA2.000e-6544.48Leucine-rich repeat containing protein n=2 Tax=Mon... [more]
A0A024GMQ1_9STRA1.590e-6360.33Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0YAK5_AURAN5.370e-6345.80Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6814contigP-wetherbeei_contig6814:476..2563 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT33
PFAMsLRR_8
Model size867
Max annot lvl2759|Eukaryota
KEGG koko:K19753
Hectar predicted targeting categoryother localisation
Exons6
Evalue4.39e-81
EggNOG OGsCOG4886@1|root,KOG0531@2759|Eukaryota
Descriptionaxoneme assembly
Cds size867
COG categoryL
BRITEko00000,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6814.1.1prot_P-wetherbeei_contig6814.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6814 476..2563 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186939.455127-CDS-P-wetherbeei_contig6814:475..5901683186939.455127-CDS-P-wetherbeei_contig6814:475..590Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6814 476..590 -
1683186939.4660203-CDS-P-wetherbeei_contig6814:896..10081683186939.4660203-CDS-P-wetherbeei_contig6814:896..1008Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6814 897..1008 -
1683186939.4760644-CDS-P-wetherbeei_contig6814:1247..14971683186939.4760644-CDS-P-wetherbeei_contig6814:1247..1497Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6814 1248..1497 -
1683186939.4864-CDS-P-wetherbeei_contig6814:1754..18871683186939.4864-CDS-P-wetherbeei_contig6814:1754..1887Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6814 1755..1887 -
1683186939.4970133-CDS-P-wetherbeei_contig6814:2199..22801683186939.4970133-CDS-P-wetherbeei_contig6814:2199..2280Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6814 2200..2280 -
1683186939.5073705-CDS-P-wetherbeei_contig6814:2387..25631683186939.5073705-CDS-P-wetherbeei_contig6814:2387..2563Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6814 2388..2563 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6814.1.1

>prot_P-wetherbeei_contig6814.1.1 ID=prot_P-wetherbeei_contig6814.1.1|Name=mRNA_P-wetherbeei_contig6814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=289bp
MPQITIDLIRRKAEHNEGLIHTLEELSLHQEEIESINETLGSNCRRLKIL
YLQNNIIGRMENLHHMKELEYLNLALNNITKIRGLQSCEFLNKLDLTVNF
VDLDVLKESVDHLASRHRLRELYMVGNPCQATWDGFNDYVVARLQQLESL
DGREITRSARIIACQRLPALEAELQGRAAEVREKKATAAAEVAAEAAAEA
AAEAATAAAAADKACSRPRLRFALPLLTDPARANGSNSESGEDEEGGTGD
GGEMTQHTPEARTKMYMELAQQKREKEERQKAMAPRDR*
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mRNA from alignment at P-wetherbeei_contig6814:476..2563-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6814.1.1 ID=mRNA_P-wetherbeei_contig6814.1.1|Name=mRNA_P-wetherbeei_contig6814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2088bp|location=Sequence derived from alignment at P-wetherbeei_contig6814:476..2563- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCAAATCACGATTGACCTGATCCGAAGGAAGGCTGAACACAATGA GGGCCTCATTCATACCTTGGAGGAACTTTCGCTGCACCAAGAGGAGATTG AGAGCATCAACGAGACACTCGGCTCGAACTGCCGGCGGCTGAAGATACTC TACCTCCAGAACAACATCATTGGCAGGTAGGACACGGCTCGTAGAGTGAC GGCAGCAAGTATTGAGGAGCTTTGAAAGCTTCAACCGCGGACTGATGTTT CTGTTCCCACCTGACGACGTTCAAATTGCACAGGATGGAGAACCTGCACC ACATGAAGGAGCTCGAATACCTGAATCTGGCGCTCAATAACATCACCAAA ATCCGAGGCCTCCAGTAAGACTACCAAGTCGATCGAGTTTCGACTTTTCT GTTTCTCTTTCCATGGCGTCCCCTCTTTATTTCACATACTACGTCTCACC TGATTCATGGTCCAATTGTTTTCATGGTGTCATTCGCCACGTTACCATGC GAGGTTTCACAGAGCCATCTTTTGCTTTGCCACCGCTGTCGCCTTATCCT CCCCTCTCATTCGAAGTGCATGGACACGTCCTGTCTACCACCGCCCCAAC AACAAAAAAAAAACAACTGTCCCGGCGGGCGGTGATGGATACGGCGGGAA ATGGCGCCGTTCTGATCTAAATGCAGGTCGTGCGAGTTTCTGAATAAACT GGACCTGACGGTGAACTTTGTGGATCTGGACGTCCTCAAGGAGTCCGTGG ACCACCTCGCCTCTCGCCACCGCCTCCGCGAGCTCTACATGGTCGGAAAC CCCTGCCAGGTGCGGTAAAGAGCAGTCGCATTTTTCTTGAAAGAGAAGAG AAGGGAGAGCATGGGAAACGGGACGTAGAAAGAAGGACGACGAAGACGAG AAATGCAGGAGCGGCAAAAGGCATAGGTAGCGGTGTAGGACGGTGCCTGT TTTCCTCTTCCGTGCGGATCGTCGCTCTTGTGAAGTGTCGGTCCAAGGTG CTGCGACCATGCGTGGAACTGTGCTTTGACCTTCTGCACACTGCCCCGTT TCCAATCTGTATGCAGGCCACGTGGGACGGTTTCAACGACTACGTCGTCG CCCGCCTCCAGCAGCTGGAATCGCTCGACGGCCGCGAGATTACGCGCTCG GCACGCATCATCGCCTGCCAGCGGCTGCCGGCGCTCGAGGCAGAGCTGCA AGGGCGGGCGGCGGAGGTGCGGGAGAAGAAAGCGACGGCGGCGGCCGAGG TGGCGGCCGAGGCGGCGGCCGAGGCGGCGGCCGAGGCGGCGACGGCTGCG GCGGCCGCCGACAAAGGTGAACGATGGATTTGGTTCTGCGGGGTTCGCAT GCCTGGGTGCTTGGTTGAAGCAGATGCCAAGAGGTTTCGGAGATTGGACG TTTCGAGTCCCGTTCGTTATTTTGTCGTGACTGCACAGGCAACAGCTGTG TACGACGGAAAGGATCGCTTTTTCGTATCTCTAGAGGTTAAAACGTGGCA TGCCCGGATGTAGTGTGTTGTGTGTTGCATCTGTCCACAACAACGGAAAT GGCAGCGTGTTCGCGTCCGCGTTTGCGCTTTGCTTTGCCGCTGCTCACAG ACCCCGCCCGAGCTAATGGAAGCAACAGCGAGTCGGGCGAGGACGAGGAG GGCGGAACAGGCGATGGGTGAGAGTGCGGGCTCATGCTTGCATTTGGCAC CCGGCTTGTTCCGGCGGGCAGTAGCATTTGCCCGTGTCTGCTGCCTCCGC TTCTCAGTTCCTCCTTTAACCGGCCGTATCATGCGCCCTCCCCGGCACCA CTGGTCACTTTCGATGCCTCCGCAGCTGCGGGGTCGTCCCGCCACGCCTT GCCGCTTCCGTTTCGAACGGCGCCACCCGTCTCTCTACTCTGCGCACATG ATCAACACGCTTGCAAACTTTAAAACCTTGCGACGGGCGGGATGCCTTGT TTGCTCCCATCGGTGTTTCGCAGGGGCGAGATGACCCAGCACACACCCGA GGCGCGCACCAAGATGTACATGGAGCTTGCGCAGCAGAAGCGTGAGAAGG AGGAGCGCCAAAAGGCCATGGCGCCCCGCGACCGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6814:476..2563-

>mRNA_P-wetherbeei_contig6814.1.1 ID=mRNA_P-wetherbeei_contig6814.1.1|Name=mRNA_P-wetherbeei_contig6814.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=867bp|location=Sequence derived from alignment at P-wetherbeei_contig6814:476..2563- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCAAATCACGATTGACCTGATCCGAAGGAAGGCTGAACACAATGA
GGGCCTCATTCATACCTTGGAGGAACTTTCGCTGCACCAAGAGGAGATTG
AGAGCATCAACGAGACACTCGGCTCGAACTGCCGGCGGCTGAAGATACTC
TACCTCCAGAACAACATCATTGGCAGGATGGAGAACCTGCACCACATGAA
GGAGCTCGAATACCTGAATCTGGCGCTCAATAACATCACCAAAATCCGAG
GCCTCCAGTCGTGCGAGTTTCTGAATAAACTGGACCTGACGGTGAACTTT
GTGGATCTGGACGTCCTCAAGGAGTCCGTGGACCACCTCGCCTCTCGCCA
CCGCCTCCGCGAGCTCTACATGGTCGGAAACCCCTGCCAGGCCACGTGGG
ACGGTTTCAACGACTACGTCGTCGCCCGCCTCCAGCAGCTGGAATCGCTC
GACGGCCGCGAGATTACGCGCTCGGCACGCATCATCGCCTGCCAGCGGCT
GCCGGCGCTCGAGGCAGAGCTGCAAGGGCGGGCGGCGGAGGTGCGGGAGA
AGAAAGCGACGGCGGCGGCCGAGGTGGCGGCCGAGGCGGCGGCCGAGGCG
GCGGCCGAGGCGGCGACGGCTGCGGCGGCCGCCGACAAAGCGTGTTCGCG
TCCGCGTTTGCGCTTTGCTTTGCCGCTGCTCACAGACCCCGCCCGAGCTA
ATGGAAGCAACAGCGAGTCGGGCGAGGACGAGGAGGGCGGAACAGGCGAT
GGGGGCGAGATGACCCAGCACACACCCGAGGCGCGCACCAAGATGTACAT
GGAGCTTGCGCAGCAGAAGCGTGAGAAGGAGGAGCGCCAAAAGGCCATGG
CGCCCCGCGACCGGTGA
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