mRNA_P-wetherbeei_contig681.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A6H5JR35_9PHAE (Riboflavin kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR35_9PHAE) HSP 1 Score: 200 bits (508), Expect = 2.910e-53 Identity = 122/262 (46.56%), Postives = 150/262 (57.25%), Query Frame = 2
Query: 1049 PGRALLEEAIKFLPLRLRNNTTGDDSSGTYLAVLDRTACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPA----------AAGAP---AAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAFFASTAAASG 1795
P + LE ++FLPL + + +G + YLAVL +T R TV YLRG+V+ GYGRGSK++GVPTANLPESQFA LR LPTGVYFGWA +E A A+G GP+K VANVGYSPTF G+EN EKIVE HLIGY + DFYG +R+LL GFQR E++F SF ELVATI +D+ DAAAAL+ P +S F+ DAFF+ AA+G
Sbjct: 278 PEQDALERLVQFLPLVMDSFESGPE---LYLAVLRKTPHRASGTVRYLRGKVSTGYGRGSKKLGVPTANLPESQFAENLRTLPTGVYFGWAALEGAATKEGEGDEGDASGGGRDGGEGPWKCVANVGYSPTFAGQENAEKIVEGHLIGY----------------------------------------------EGEDFYGRTIRMLLAGFQRREKKFASFPELVATINKDVRDAAAALNEPRFSAFKADAFFSGRPAATG 490
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A7R9Y997_9STRA (Riboflavin kinase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y997_9STRA) HSP 1 Score: 154 bits (388), Expect = 3.050e-38 Identity = 97/229 (42.36%), Postives = 119/229 (51.97%), Query Frame = 2
Query: 1049 PGRALLEEAIKFLPLRLRNNTTGDDSSGTYLAVLDRTACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDA 1735
P A+L +FLPL L ++ VL R V+ L+LRG+VA G+GRGSK++G PTANLP S+FA+ L DLP GVY GWA VE + G + MVAN+GYSPTF G+EN EKIVEA+LIGY +A A DFYG PLRLL+ G QR E +F F EL A I D+ DAA A +A
Sbjct: 83 PDAAMLTSLTRFLPLDLEYCEGLTSEEDPFIVVLRRRPVAVMERPLFLRGKVASGFGRGSKKLGFPTANLPSSEFANHLEDLPVGVYCGWAVVEY--SPGETDRTVYPMVANIGYSPTFEGQENTEKIVEAYLIGYNPRAASVEEM------------------------------------SAGDFYGKPLRLLITGRQRPELKFDGFLELRARIATDVEDAAHASEA 273
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A836CMR2_9STRA (Riboflavin kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMR2_9STRA) HSP 1 Score: 151 bits (382), Expect = 3.900e-37 Identity = 104/247 (42.11%), Postives = 123/247 (49.80%), Query Frame = 2
Query: 1049 PGRALLEEAIKFLPLRLRNNTTGDDSSGTYLAVLDRTACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLP---ESQFAHRLRDLPTGVYFGWAQVEAPAA-AGAPAAG-PFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAFFA 1774
P A L + LPLR+ D G YLA L R +L + G V G+GRG K++GVPTANL + L DLPTGVY GWA VE A AG+ +A P K V NVG+SPTF E N EKI+EAHLIG A++ DFYG+P+RLLL GF R ERRF F +LVA IR+D+ DAAAALD PY AFFA
Sbjct: 127 PAEAALRRMARHLPLRV---DAWRDRDGLYLAALTRVRHALLRDFVCAYGAVGRGFGRGGKKLGVPTANLQPDGDGPLRQGLADLPTGVYIGWALVEEDGAGAGSSSAQRPVKAVVNVGFSPTFE-ERNPEKIIEAHLIGRDPATSG-------------------------------------------DFYGAPMRLLLAGFLRPERRFAGFPQLVAAIRKDVADAAAALDTEPYRALAEHAFFA 326
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A7S2XYQ3_9STRA (Riboflavin kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ3_9STRA) HSP 1 Score: 153 bits (387), Expect = 3.020e-36 Identity = 95/241 (39.42%), Postives = 124/241 (51.45%), Query Frame = 2
Query: 1049 PGRALLEEAIKFLPLRLRNNTTGDDSSGTYLAVLDRTACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLPESQF-AHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAF 1768
P + LE + LPL +++ D YLAVL R L +L LRG+VAHGYGRGS+++G+PTANLPES F L D+P GVY GWA VE GPFK V N+G+SPTF G+EN EKIVEAHL+ + DFY +RL+LVGF+R E++F SF EL+A IR+D+ D + ALD + + +F
Sbjct: 350 PTQEQLEAMVANLPLEIKSFEGKDGVKDLYLAVLQRVPVSPLTKLLCLRGKVAHGYGRGSRKLGIPTANLPESNFLTSALGDVPAGVYCGWALVEQNG--NGAHKGPFKAVVNIGFSPTFEGKENPEKIVEAHLVH----------------------------------------------DFEEDFYDKQMRLVLVGFKRFEKKFSSFPELLANIRQDVKDCSEALDCEQFKSIQDISF 542
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A7S3Q9G1_9STRA (Riboflavin kinase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9G1_9STRA) HSP 1 Score: 150 bits (379), Expect = 2.230e-35 Identity = 93/248 (37.50%), Postives = 125/248 (50.40%), Query Frame = 2
Query: 1049 PGRALLEEAIKFLPLRLRN-------NTTGDDSSGTYLAVLDRTACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAFF 1771
P + +E ++F PLR N + + ++ Y A + + VL LRG+V G+GRG K++GVPTANLP S F + L ++PTGVYFGWA ++ + K V NVGYSPTF GEEN+EKIVEAHLI G + DFYG ++L L GF R ER+F SF +L+A I RD+ +A ++LD PYS F D+FF
Sbjct: 290 PSQTEFDELLQFQPLRRENFMEEAQLSENAESATALYFASAKKIPHLLTREVLRLRGKVDTGFGRGGKKLGVPTANLPSSLFQNALENVPTGVYFGWALIKGDDQSSKGRDVIHKAVVNVGYSPTFDGEENKEKIVEAHLI-------------------------------------------VGDDDIEGDFYGETMKLGLCGFLRSERKFASFPDLIAAINRDVNNAKSSLDLAPYSTFCSDSFF 494
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A7S4AA97_9STRA (Riboflavin kinase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AA97_9STRA) HSP 1 Score: 144 bits (364), Expect = 3.410e-35 Identity = 92/213 (43.19%), Postives = 110/213 (51.64%), Query Frame = 2
Query: 1157 TACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPF-KMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDAT--------DFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAF 1768
T R+LP VL RG V GYGRG K++GVPTANLP S F + L D+ TGVYFGW +E + K V NVGYSPTF GEEN+EKI+EAHLI GDG G+ G E + DFYG +RL LVGF REE++F SF EL+A I D+ DA +LD PY + D F
Sbjct: 83 TRARLLPDVLRFRGSVDEGYGRGGKKLGVPTANLPSSLFQNALEDVGTGVYFGWVALERTQNSNTDNDYELHKAVVNVGYSPTFEGEENKEKIIEAHLI------------MEKGDGKDAESN------------------GDSGKETESRSDKAFIEDFYGVAMRLQLVGFLREEKKFDSFPELIAQINADVQDAKISLDCQPYKACQTDPF 265
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A1E7FL58_9STRA (Riboflavin kinase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FL58_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.230e-34 Identity = 97/196 (49.49%), Postives = 113/196 (57.65%), Query Frame = 2
Query: 1184 LYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAFF 1771
L RG V GYGRG K++GVPTANLP S F + L D+ TGVYFGWA +E +K V NVGYSPTF G+EN+EKI+EAHLI XXXXXXXXXXXXX DFYG P+RL L+GF REE++F SF EL+A I D+ DA +LD PY R DAFF
Sbjct: 1 LRYRGSVDEGYGRGGKKLGVPTANLPSSLFQNALEDVATGVYFGWAAIERN---NNELLQVYKAVVNVGYSPTFEGKENKEKIIEAHLI-------------------------LEKEXXXXXXXXXXXXXXXKTSNIIEDFYGIPMRLQLLGFLREEKKFDSFPELIAQILADVDDARLSLDCHPYQSCRSDAFF 168
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: B8C262_THAPS (Riboflavin kinase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C262_THAPS) HSP 1 Score: 143 bits (360), Expect = 2.150e-34 Identity = 94/198 (47.47%), Postives = 110/198 (55.56%), Query Frame = 2
Query: 1181 VLYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAG-PFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAFF 1771
+L LRG VA GYGRG K++GVPTANLP S F L D+ TGVYFGWA VEAP+ P K V NVGYSPTF G+EN+EKIVEAHLI S D EG DFYG +RL L+GF R ER+F SF +L+A I RDI +AA ALD+ PY F ++A F
Sbjct: 126 ILRLRGPVATGYGRGGKQLGVPTANLPASLFQSALEDVATGVYFGWAVVEAPSTDSTIGRNTPIKAVVNVGYSPTFEGKENKEKIVEAHLI----TSNSPMEKNELADEYSTSSADDTKI--------------EG------DFYGETMRLQLIGFLRAERKFDSFPDLIAQIHRDIGNAAWALDSMPYI-FSKEAEF 298
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: B7FXN4_PHATC (Riboflavin kinase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXN4_PHATC) HSP 1 Score: 133 bits (335), Expect = 6.790e-33 Identity = 79/196 (40.31%), Postives = 98/196 (50.00%), Query Frame = 2
Query: 1184 LYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGEDATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAFF 1771
L LRG+V GYGRG K++G PTANLP F + L+D+P GVYFGWA +E+ A K V NVG+SPTF G+EN EKIVEAHL+ E TDFY +RL L GF R E +F SF +L+ I D++DA ALD P+ F+ D FF
Sbjct: 1 LRLRGKVDSGYGRGGKKLGFPTANLPSRLFQNALQDVPAGVYFGWALLESDELAAPGRNIAHKAVVNVGFSPTFEGQENAEKIVEAHLMAE---------------------------------------------EPLTDFYNETMRLQLHGFLRPEIKFSSFPDLIKQINADVVDAKEALDVSPFVGFKSDLFF 151
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Match: A0A8J6C5Q3_DIALT (Riboflavin kinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Q3_DIALT) HSP 1 Score: 143 bits (360), Expect = 7.230e-33 Identity = 101/247 (40.89%), Postives = 123/247 (49.80%), Query Frame = 2
Query: 1055 RALLEEAIKFLPLRL-------RNNTTGDDSSGTYLAVLDRTACRVLPTVLYLRGEVAHGYGRGSKRIGVPTANLPESQFAHRLRDLPTGVYFGWAQVEAPAAAGAPAAGPFKMVANVGYSPTFMGEENREKIVEAHLIGYGAASAXXXXXXXSGDGXXXXXXXXXXXXXXXXXXXXXXXXGEGGGE--DATDFYGSPLRLLLVGFQREERRFGSFGELVATIRRDIIDAAAALDAPPYSDFRRDAF 1768
RAL E A + LPLRL + G G Y A+L+R R LP V+ LRGEV+ GYGRGS ++GVPTANL E FA L +PTGVY GWA +E AAG + V NVGYSPTF G EN +KIVEAHL+ G + GGG FYG+ +RLLL F R E +F SF L+A I +D+ +AA L + F RD F
Sbjct: 265 RALAELA-EGLPLRLVALDDEAPADGAGGGGDGFYCALLERWLPRPLPRVMLLRGEVSRGYGRGSAQLGVPTANLREQDFAGELAHVPTGVYAGWAVIEG--AAGRAGEVVHRAVVNVGYSPTFAGAENAQKIVEAHLLPGGPSGRE-----------------------------------NGGGALFAPASFYGAQMRLLLCAFVRPEHKFESFPLLLAAIHKDVDEAARVLSEDELAPFARDPF 473 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig681.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig681.1.2 >prot_P-wetherbeei_contig681.1.2 ID=prot_P-wetherbeei_contig681.1.2|Name=mRNA_P-wetherbeei_contig681.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=438bp MCSALCYDVCIFMIGSMTVMLDHQSSSGDIVRFPETCLTARSPFPPDAALback to top mRNA from alignment at P-wetherbeei_contig681:6804..9090+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig681.1.2 ID=mRNA_P-wetherbeei_contig681.1.2|Name=mRNA_P-wetherbeei_contig681.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2287bp|location=Sequence derived from alignment at P-wetherbeei_contig681:6804..9090+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig681:6804..9090+ >mRNA_P-wetherbeei_contig681.1.2 ID=mRNA_P-wetherbeei_contig681.1.2|Name=mRNA_P-wetherbeei_contig681.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1314bp|location=Sequence derived from alignment at P-wetherbeei_contig681:6804..9090+ (Phaeothamnion wetherbeei SAG_119_79)back to top |