prot_P-wetherbeei_contig6791.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6791.3.1
Unique Nameprot_P-wetherbeei_contig6791.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length108
Homology
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F)

HSP 1 Score: 84.7 bits (208), Expect = 8.980e-18
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLGPMLFRKL 98
            MA+ SAAQEAV++R L SD       ATVI EDNQSAI +A     Q+H RA+H+D+ + FI ++V SG + L   KT + +ADMLTK L  + F KL
Sbjct:  142 MALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNP--QFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKFIKL 237          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A7D9HZJ0_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZJ0_PARCT)

HSP 1 Score: 86.7 bits (213), Expect = 9.450e-18
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    2 AVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTL 90
            A+ +AAQEA+YLR+L  D GFP   AT I EDNQS I + +  V   H R++H+D    FI ERV + EIK+HY+ T E  AD+LTK+L
Sbjct:  304 AMAAAAQEAIYLRALLKDFGFPMEKATDIGEDNQSCIKMCHNPV--MHKRSKHIDTKLHFIRERVENKEIKIHYVPTEEMTADILTKSL 390          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A6G0QEK6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0QEK6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 9.630e-18
Identity = 47/98 (47.96%), Postives = 58/98 (59.18%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLGPMLFRKL 98
            MA+    +E V++R L  D G  QV ATVILEDNQ A+ALA     Q  AR +H+D+ Y FI   V S E+KL Y+ T  QLAD +TK L     R L
Sbjct:    1 MALSDCVKECVWMRRLLKDIGAEQVGATVILEDNQGAMALAKNVGYQ--ARTKHIDIRYHFIRANVVSDEVKLEYVDTKNQLADFMTKGLSSKPLRYL 96          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A6S7HE32_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HE32_PARCT)

HSP 1 Score: 86.7 bits (213), Expect = 1.160e-17
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    2 AVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTL 90
            A+ +AAQEA+YLR+L  D GFP   AT I EDNQS I + +  V   H R++H+D    FI ERV + EIK+HY+ T E  AD+LTK+L
Sbjct:  353 AMAAAAQEAIYLRALLKDFGFPMEKATDIGEDNQSCIKMCHNPV--MHKRSKHIDTKLHFIRERVENKEIKIHYVPTEEMTADILTKSL 439          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A7D9J3T8_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9J3T8_PARCT)

HSP 1 Score: 86.7 bits (213), Expect = 1.380e-17
Identity = 46/89 (51.69%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    2 AVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTL 90
            A+ +AAQEA+YLR+L  D GFP   AT I EDNQS I + +  V   H R++H+D    FI ERV + EIK+HY+ T E  AD+LTK+L
Sbjct:  502 AMAAAAQEAIYLRALLKDFGFPMEKATDIGEDNQSCIKMCHNPV--MHKRSKHIDTKLHFIRERVENKEIKIHYVPTEEMTADILTKSL 588          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 86.7 bits (213), Expect = 1.410e-17
Identity = 47/98 (47.96%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLGPMLFRKL 98
            MA+ SAAQEAV++R L +D    Q   TV+ EDNQSAI +A  +  Q+H RA+H+D+ Y FI E++  G I L Y  T + +ADM TK L    F KL
Sbjct:  645 MALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNS--QFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKFVKL 740          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A329T4J8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4J8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.600e-17
Identity = 45/91 (49.45%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLG 91
            MA+    QE ++ R++  D G  QV AT + EDNQ AIALA+ A   +HAR +H+D+ + FI E V    +K+ YI T  QLADMLTKTLG
Sbjct:  133 MALTLCTQEVLWTRAMLKDMGHEQVGATRVWEDNQGAIALASNA--GYHARTKHVDIRHHFIRENVERRTLKVDYIDTKRQLADMLTKTLG 221          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A0P1AR63_PLAHL (Polyprotein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AR63_PLAHL)

HSP 1 Score: 81.3 bits (199), Expect = 2.140e-17
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLGPMLFRKL 98
            MA+    QE ++ R++  D G  QV+ T + EDNQ AIALAN A   +HAR +H+++ + FI E V  G +K+ YI T  QLADMLTK L   + + L
Sbjct:   29 MALSLCTQEILWKRAMLRDMGHEQVEGTQVWEDNQGAIALANNA--GYHARTKHVEIKHHFIRENVPGGLLKIDYIDTKSQLADMLTKALKTKVLKYL 124          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A238FCJ3_9BASI (BQ2448_1883 protein n=1 Tax=Microbotryum intermedium TaxID=269621 RepID=A0A238FCJ3_9BASI)

HSP 1 Score: 84.0 bits (206), Expect = 4.490e-17
Identity = 44/95 (46.32%), Postives = 59/95 (62.11%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLGPMLF 95
            +A  SA +EA++LR +  D    Q  AT+I EDNQ+ I +AN      HARA+H DV + F+ ERV  G++KL Y  T    AD+LTK LGP+ F
Sbjct:  208 LAASSATKEALWLRQIAKDLHINQPSATIIFEDNQATIKIANNPAH--HARAKHFDVVHHFVRERVTLGDVKLVYCPTDSMTADVLTKGLGPIKF 300          
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Match: A0A6G0SFH2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0SFH2_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 5.230e-17
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 0
Query:    1 MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHARARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLG 91
            MA+    +E +++R L  D G  QV ATVI EDNQ A+ALAN     + A  +H+D+ Y FI E+V S E++L Y+ T  QLAD +TK L 
Sbjct:   55 MALSDCVKECIWMRRLLKDIGADQVGATVIYEDNQGAMALANNV--DYQAHTKHIDIRYHFIREKVVSNEVELEYMDTKNQLADFMTKGLS 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6791.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C093D0F8.980e-1850.00LOW QUALITY PROTEIN: secreted RxLR effector protei... [more]
A0A7D9HZJ0_PARCT9.450e-1851.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0QEK6_9STRA9.630e-1847.96Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6S7HE32_PARCT1.160e-1751.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9J3T8_PARCT1.380e-1751.69Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A498M2F0_LABRO1.410e-1747.96Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A329T4J8_9STRA1.600e-1749.45Uncharacterized protein n=2 Tax=Phytophthora cacto... [more]
A0A0P1AR63_PLAHL2.140e-1744.90Polyprotein n=1 Tax=Plasmopara halstedii TaxID=478... [more]
A0A238FCJ3_9BASI4.490e-1746.32BQ2448_1883 protein n=1 Tax=Microbotryum intermedi... [more]
A0A6G0SFH2_9STRA5.230e-1746.15Uncharacterized protein n=4 Tax=Phytophthora fraga... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 24..101
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 24..101
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..92
e-value: 6.91154E-36
score: 117.184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6791contigP-wetherbeei_contig6791:2723..3046 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6791.3.1mRNA_P-wetherbeei_contig6791.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6791 2587..3233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6791.3.1 ID=prot_P-wetherbeei_contig6791.3.1|Name=mRNA_P-wetherbeei_contig6791.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
MAVCSAAQEAVYLRSLFSDPGFPQVDATVILEDNQSAIALANAAVEQWHA
RARHMDVCYKFIMERVRSGEIKLHYIKTTEQLADMLTKTLGPMLFRKLSA
FIMRIRA*
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