prot_P-wetherbeei_contig6785.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6785.1.1
Unique Nameprot_P-wetherbeei_contig6785.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length68
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig6785.1.1 vs. uniprot
Match: A0A835YPK2_9STRA (Squalene/phytoene synthase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPK2_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 2.780e-8
Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 0 
Query:    1 MKSAQGAAEALPGDAFRALLPAVDAAWYLGALEAAGFDLFHPSLCRLPRSHLRQHWRLAAAVFGKKF 67
            M+  Q  A  L  DAFRALLP V AAWYL ALE AGF+ F  SL   PRS +   +R+A A    KF
Sbjct:  261 MEQGQELASGLSNDAFRALLPGVRAAWYLEALEKAGFNAFDASLT--PRSWIPFQFRVARAAMTHKF 325
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6785.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YPK2_9STRA2.780e-852.24Squalene/phytoene synthase-domain-containing prote... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6785contigP-wetherbeei_contig6785:448..651 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6785.1.1mRNA_P-wetherbeei_contig6785.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6785 424..651 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6785.1.1 ID=prot_P-wetherbeei_contig6785.1.1|Name=mRNA_P-wetherbeei_contig6785.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=68bp
MKSAQGAAEALPGDAFRALLPAVDAAWYLGALEAAGFDLFHPSLCRLPRS
HLRQHWRLAAAVFGKKF*
back to top