mRNA_P-wetherbeei_contig6768.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6768.1.1
Unique NamemRNA_P-wetherbeei_contig6768.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: D8LR94_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR94_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 8.310e-75
Identity = 147/357 (41.18%), Postives = 201/357 (56.30%), Query Frame = 2
Query:  113 RAAGREVDRLTCIVRHINPRLLPGGSQHPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQFTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGRE-PGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFSHMARQNARRWN 1180
            + A +E+DRLT +V   NP ++  G +HP++    ELWPVL A+  +H+ S    EK  R  KHAMRT    F PLL  L+  +V  F+    S  LY  SI VT+FGR  P + A LF+ML   + A   CL++LD  TA+PDVVEE+FYLV R + +CP+PLV SPLL S++ CG  GL+LHHREA++GVL CLE +VGL +  G                 + RA   M               +E +L   G  LVQ LV CCVG+ P+Y++DG  GSVAGLMW+++ L P W+QEW+   L  +        Q+   + +L    A   R++F   V RF+ +  QN R W+
Sbjct:  679 KLAQQELDRLTVVVSRANP-VMQAGREHPVVMVVRELWPVLEAVSAKHQSSGQVFEKLSRFFKHAMRTCKEHFEPLLRPLIAHLVGTFSVVPHSSCLYCGSICVTEFGRRGPEFTAVLFQMLSDFAQAVFRCLQTLDDFTANPDVVEEFFYLVGRFVDYCPDPLVTSPLLSSLVRCGMVGLQLHHREAQRGVLHCLEEVVGLAMAEG------------PTGKANPRAQQFMP-------------TVEQVLREHGPGLVQELVKCCVGEQPSYSVDGDGGSVAGLMWRISRLCPAWLQEWLQQVLGALPAKVADNYQKQELMEKLFGAQADKGRESFDTAVARFTSVCFQNQRSWS 1009          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A7S2D4C3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4C3_9STRA)

HSP 1 Score: 221 bits (563), Expect = 8.580e-60
Identity = 124/356 (34.83%), Postives = 186/356 (52.25%), Query Frame = 2
Query:  113 RAAGREVDRLTCIVRHINPRLLPGGSQHPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQFTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVV--SPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFSHMARQNARR 1174
            RA  +++DR+  + R +  + LP G  HPLL     +WP L ++L +++ S++  EK CRC K  +R+  + F P LE L+  ++  F  +  S  LY +SI +T+FG  P + A L++ML++ S      L  LDH  AHPD+VEEYF+LV R L +CP PL+   S L  S++ CG  GL+L HREA  G+LS +E L+G GL                       ++   N       +   R  +E +LA  G  LV+ +V   VG LPAY +D   G++AG++WKL+L  PQ +  W   +LA V+   V   QR   +  +           F + +  FS  A +N+RR
Sbjct:  639 RAIVQDLDRIVSVARPLKMKGLPVGEAHPLLEILQAIWPSLDSILNKYKTSESMAEKVCRCYKFILRSCQQSFAPCLEALMTHLLRHFDTSPFSAYLYSASICITEFGESPAHEAMLYKMLEQFSTTVFRILSCLDHFVAHPDMVEEYFFLVGRFLEYCPTPLLPPQSQLSISIVHCGLVGLKLEHREAHAGILSAIEQLIGTGLI----------------------SSTGTNKPSKQQIAGQLRSSVEQVLAQVGEPLVKAVVESLVGMLPAYGIDDGKGTLAGVLWKLSLFDPQILSNWFGTALALVDMQIVDANQRAGLMEAMGRAIQGRHESDFFNAIGVFSSQAHRNSRR 972          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A7S3NIA9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIA9_9STRA)

HSP 1 Score: 205 bits (522), Expect = 5.040e-54
Identity = 126/337 (37.39%), Postives = 174/337 (51.63%), Query Frame = 2
Query:  182 GGSQHPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQFTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGD----DADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADD---RDAFVDTVRRFSHMARQNAR 1171
               +HP+L    +LWPV  A+  R+  S   +E+ CRC KHAMR+   QF P+LE ++  +V  F++   S  +Y SSI +T+FGR+      LFEML +LSA       SLD     PDV EEYFYL  R L +CP+ LV SPLLESVL CG  GL L HREA++G+L C E  V +                      +     + NGD    DA   +++  L +E  L   G  +  G++    GDLPAYALD   GS+ G++W+L L  P  +  W A SL       VP +   N ++  L  + A+D   +D+F D +  FS   R  A+
Sbjct:  819 ANRRHPVLSFIEKLWPVFEAVAERYGDSPQLIERLCRCYKHAMRSCRTQFEPMLEQMIDHLVRHFSKTPLSSYVYASSICITEFGRDSNKHGILFEMLTKLSATVFCLFRSLDDFRQRPDVAEEYFYLTSRFLDYCPDHLVHSPLLESVLRCGIVGLALEHREAQRGILHCFERTVVVAY--------------------EAALNASQNGDPSTPDARRAAALATLLVEQQL---GRLIADGVLKALTGDLPAYALDEGHGSLVGVLWRLRLFCPNDLPRWCANSL-----QNVPERYASNDIKSDLMVSIAEDPAVKDSFCDALLLFSARCRDLAK 1127          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A7S2R2F7_9STRA (Hypothetical protein n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2F7_9STRA)

HSP 1 Score: 194 bits (494), Expect = 1.910e-50
Identity = 118/357 (33.05%), Postives = 190/357 (53.22%), Query Frame = 2
Query:  113 RAAGREVDRLTCIVRHIN-PRLLP------GGSQHP----LLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGR-QFTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFS 1147
            + A  E++RLT +VR ++ PR+ P      GG        LL    ++WP+L ++ +++ R     EK CR  KH +R  G   + P+LE L   +++ + ++  SP LY +SI +T++GR P +   LF ML  + +     L ++D  TAHPDVVEE+F+L  R++++CPEPLV+SPLL S+L C   G+++ H++A +G L+ LE +V  GL                           +N +  D +   +R  +E  + + G +L   LV   VG+LPAY +D  SGS+A +++KL  L P  + +W+  ++     S VP   R  FL  L  ++    RD F  +VR+ S
Sbjct:  647 KVAVTEIERLTVVVRFLHVPRMNPASTTASGGKLSARSTFLLDLMTQVWPLLDSVSKKYPRDINLAEKLCRLHKHVLRGCGSGAYQPMLEPLCAHLIQNYTQSRLSPYLYAASICITEYGRNPQFTQLLFGMLSDMCSVTFEFLRTIDDFTAHPDVVEEFFFLAGRMMTYCPEPLVLSPLLHSLLQCAIVGIKIDHKDANRGTLNFLENMVAYGLN--------------------------LNVNPNDLNKLSYRESMERSIVAEGQQLATNLVQALVGNLPAYRIDNSSGSIASILYKLNQLCPSLLMQWVNPAI-----SIVPEPIRKPFLFALSIQSTRS-RDEFYSSVRKLS 971          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A7S2EEE2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EEE2_TRICV)

HSP 1 Score: 189 bits (479), Expect = 3.730e-50
Identity = 120/364 (32.97%), Postives = 183/364 (50.27%), Query Frame = 2
Query:  113 RAAGREVDRLTCIVRHIN-PRLLPGGSQHP---------------LLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQ-FTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFSHM 1153
            + A  EV+RLT IVR+++ PR   G                    ++    E W +L A+ +++       EK CR  KH MR  GR  + PLLE L   +V  F  +  SP LY +SI ++++G++      LF+ML  +S A    L +    TAHPDVVEE+F+L  R++S+CPEPLV SPLL S+L C   G++L HR+A  G L+ LE  +  GL                            N   AD + + ++  +E  +   G ++V  L     GDLP Y LD   GS+AG+++KL  L P  + +W+ ++L       VP Q +  FL+ L+++ +   RD F  +VR+F+ +
Sbjct:  209 KQATAEVERLTVIVRYLDLPRATKGAGATAAAATGGPKLSARATFIMDLMSESWNLLDAISQKYPHDIHLAEKLCRLHKHVMRGCGRSAYRPLLESLCAQLVRNFDTSRLSPYLYAASICISEYGQDTSAVPLLFKMLTDMSTAVFGLLRTPGDFTAHPDVVEEFFFLTGRMMSYCPEPLVASPLLGSLLECAEVGMKLDHRDANSGTLNFLENTISFGLR-------------------------LKNRGGADPNQNAYKDALEKAIVREGQKVVYNLASALRGDLPLYRLDNDRGSIAGVLFKLNELCPGLLMQWLDSALMH-----VPGQAKSIFLQSLMDKVS---RDEFDSSVRQFTSV 539          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: B8BVT4_THAPS (Xpo1 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVT4_THAPS)

HSP 1 Score: 188 bits (478), Expect = 3.200e-48
Identity = 114/345 (33.04%), Postives = 177/345 (51.30%), Query Frame = 2
Query:  128 EVDRLTCIVRHINPRLLPGGS----QHPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGR-QFTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFS 1147
            E+ RLT +++++   +            +L    E WP+L  + ++  R  A  EK CR  KHA+R  G   FTP+LE L+  +V  F+++L SP LYL+SI ++++G+ P ++  +F M+  LS +    L S +  TA+PDVVEE+FY+  R++S+CP PLV S LL S+  C   G++LHH+ A KG L+ LE+ V   L                            +    D +   +   +E  + S G  LV  L    +GDLP+Y LD  SGS+AG+++ L  L P  + +W+   L      + P   +  FL  L  +AA   RD F  +VR+F+
Sbjct:  767 EICRLTVLIQNLRLSMNSSAGIVNRSDFILSLMQESWPMLDVISQKFPRDFALCEKLCRLHKHALRECGSVAFTPMLEPLIDQIVRNFSQSLSSPYLYLASICISEYGKNPTHSQQMFNMVANLSTSVFQALRSAEDFTANPDVVEEFFYMAGRMVSNCPGPLVQSNLLNSLFQCAALGMKLHHKAANKGTLNFLESTVSYNLK-------------------------LRSSGSLDANEQANMAALERAIISDGQPLVINLAQALLGDLPSYPLDYGSGSIAGVLFYLNQLCPDVLIQWIQPPLV-----SAPEHAKSAFLVTLRNQAA---RDEFNSSVRKFT 1078          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A1E7FLF7_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLF7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 7.340e-43
Identity = 101/317 (31.86%), Postives = 162/317 (51.10%), Query Frame = 2
Query:  128 EVDRLTCIVRHINPRLLPGGSQHPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQ-FTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNF 1075
            E+DRLT IV+ +     P    +P++     +W +L           +   K     +  ++  G   + P+LE L++ +V+ + R+  S  LY +SI VT++GR P +++ LF M+  ++  +   L +LD LT HPDVVEE FY++ R+++HCPEPLV+SPLL+++  C   G++L HR A KG L+ +E  +  GL                            N  D        +  +E++L + G  +V  L    +GDLPA  +D  +GS+AG++WKL  L P  M +WM  +LA     T P + R +F
Sbjct:  718 ELDRLTIIVQFLTVPTQPTSVTNPIMEVIQSIWHLLGCYFSEISSGQSVGRKNLPFSQTRVKVCGAAAYEPMLEPLMKQLVQSYERSRQSAYLYAASICVTEYGRIPKHSSNLFNMINAMATVSFSFLNNLDDLTRHPDVVEELFYMMGRMITHCPEPLVMSPLLQALFQCAAVGMQLDHRAANKGTLNFIENSINYGL-----------------------TLKERNQHDC-------QQALESVLVNEGQAIVNNLTLSLMGDLPACNVDSGNGSIAGILWKLHSLSPAMMTQWMTVALA-----TAPERPRIDF 999          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A1Z5K957_FISSO (Transportin-3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K957_FISSO)

HSP 1 Score: 172 bits (436), Expect = 8.310e-43
Identity = 107/351 (30.48%), Postives = 171/351 (48.72%), Query Frame = 2
Query:  128 EVDRLTCIVRHINPRLLPGGSQHPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQ-FTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFSHMARQNARRW 1177
            E+DRLT +V+ +    +   + +P+L     LW +L A+  R    +   EK CR  KHA+R++G   ++P+   L++ +V  + R+  SP LYL+SI V ++G+ P Y   LF+ +  LS      L  L+ +T HPDVVEE+FYL+ RV ++CP+PL++SPLL S+L C   G++L H+ A KG L  L+ L+   L                    + +AA+                  E  L+  G  +V  L    +GDLPAY        +   +WKL L   Q + +W+A++   V    +P + +  F+  L +    ++   F   VR F     +  R W
Sbjct:  612 EIDRLTVVVQFLK---VASCTPNPMLEMMKSLWSLLEAVFNRFPDDNMLAEKLCRLHKHALRSIGSNAYSPMANTLLQTIVLSYERSRQSPFLYLASICVAEYGQNPVYTQQLFDTVFTLSNTTFSFLRDLEDMTNHPDVVEEFFYLMGRVTNNCPDPLMISPLLHSLLQCAVVGMQLEHQGANKGTLRFLDDLISYALS------------LREQNKPESKAAL------------------EKALSREGQMIVHNLARAVIGDLPAYN----ERQIPETLWKLNLFDSQLLLQWLASAFQGVE--RIPERPKAEFMSALSKGLPFEE---FSIVVRAFQDACGKERRSW 920          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: A0A7S2D5U0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5U0_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.220e-41
Identity = 91/257 (35.41%), Postives = 131/257 (50.97%), Query Frame = 2
Query:  410 SSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVV--SPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFSHMARQNARR 1174
            +SI +T+FG  P + A L++ML++ S      L  LDH  AHPD+VEEYF+LV R L +CP PL+   S L  S++ CG  GL+L HREA  G+LS +E L+G GL                       ++   N       +   R  +E +LA  G  LV+ +V   VG LPAY +D   G++AG++WKL+L  PQ +  W   +LA V+   V   QR   +  +           F + +  FS  A +N+RR
Sbjct:    6 ASICITEFGESPAHEAMLYKMLEQFSTTVFRILSCLDHFVAHPDMVEEYFFLVGRFLEYCPTPLLPPQSQLSISIVHCGLVGLKLEHREAHAGILSAIEQLIGTGLI----------------------SSTGTNKPSKQQIAGQLRSSVEQVLAQVGEPLVKAVVESLVGMLPAYGIDDGKGTLAGVLWKLSLFDPQILSNWFGTALALVDMQIVDANQRAGLMEAMGRAIQGRHESDFFNAIGVFSSQAHRNSRR 240          
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Match: B7FP09_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP09_PHATC)

HSP 1 Score: 167 bits (422), Expect = 5.540e-41
Identity = 110/353 (31.16%), Postives = 173/353 (49.01%), Query Frame = 2
Query:  128 EVDRLTCIVRHINPRLLPGGSQ----HPLLCPFCELWPVLAALLRRHERSDAFVEKYCRCVKHAMRTLGRQ-FTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAAPLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVVSPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHXXXXXXXXXXXXXXDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGCCVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPPQQRGNFLRQLLEEAAADDRDAFVDTVRRFSHMARQNAR 1171
            E++RLT +VR++   +L  G+     HP+L     +W  L A + R        EK CR  KH++R+ G Q ++P+L+ L+  +V+ F R+  SP LY +SI + ++G +  Y+  L  M+  ++      L ++D LTAHPDVVEE FY++ R++S+CP+PLV SPLL S+L C   G++L H  A KG L  LE  +  GL                      + A               +  +E  L+  G  +V  L+   +GDLP Y     +  +  ++WKL LL P  + +W+ ++ A     T+P   + +F+  L    A   RD F   VR F     +  R
Sbjct:  578 EIERLTVLVRYLV--ILYDGNATTGLHPMLELTTSIWSFLDAAVIRFPGDIVLAEKICRLHKHSLRSCGAQAYSPMLDRLMTQLVQSFERSHQSPFLYAASICIAEYGSDSTYSNRLLGMVSAMATTCFSFLRNVDELTAHPDVVEELFYMMGRMMSNCPDPLVQSPLLRSLLQCAAVGMQLDHHGANKGTLKFLENTISYGLS----------------LREQKKPAC--------------QAPLEEALSQEGQAIVVNLMKAMMGDLPEYG----NSQIPEILWKLNLLCPGLLTQWLHSAFA--GTLTLPEGAKNDFIAALDTGLA---RDEFSMAVRAFQTACERQRR 889          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6768.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR94_ECTSI8.310e-7541.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2D4C3_9STRA8.580e-6034.83Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3NIA9_9STRA5.040e-5437.39Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2R2F7_9STRA1.910e-5033.05Hypothetical protein n=2 Tax=Eucampia antarctica T... [more]
A0A7S2EEE2_TRICV3.730e-5032.97Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
B8BVT4_THAPS3.200e-4833.04Xpo1 domain-containing protein n=1 Tax=Thalassiosi... [more]
A0A1E7FLF7_9STRA7.340e-4331.86ARM repeat-containing protein n=1 Tax=Fragilariops... [more]
A0A1Z5K957_FISSO8.310e-4330.48Transportin-3 n=2 Tax=Fistulifera solaris TaxID=15... [more]
A0A7S2D5U0_9STRA2.220e-4135.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B7FP09_PHATC5.540e-4131.16Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6768contigP-wetherbeei_contig6768:265..2896 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LR94
PFAMsCHORD,Xpo1
Model size1415
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K05288,ko:K15436
KEGG ReactionR05923,R08107
KEGG Pathwayko00563,ko01100,map00563,map01100
Hectar predicted targeting categoryother localisation
Exons3
Evalue4.24e-59
EggNOG OGsKOG2081@1|root,KOG2081@2759|Eukaryota
Descriptionnuclear localization sequence binding
Cds size882
COG categoryK
BRITEko00000,ko00001,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186935.9746728-UTR-P-wetherbeei_contig6768:264..5711683186935.9746728-UTR-P-wetherbeei_contig6768:264..571Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6768 265..571 +
1683186936.0092354-UTR-P-wetherbeei_contig6768:2670..28961683186936.0092354-UTR-P-wetherbeei_contig6768:2670..2896Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6768 2671..2896 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186935.9838827-CDS-P-wetherbeei_contig6768:571..8731683186935.9838827-CDS-P-wetherbeei_contig6768:571..873Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6768 572..873 +
1683186935.9929817-CDS-P-wetherbeei_contig6768:1293..16901683186935.9929817-CDS-P-wetherbeei_contig6768:1293..1690Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6768 1294..1690 +
1683186936.0010824-CDS-P-wetherbeei_contig6768:2487..26701683186936.0010824-CDS-P-wetherbeei_contig6768:2487..2670Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6768 2488..2670 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6768.1.1prot_P-wetherbeei_contig6768.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6768 572..2670 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6768.1.1

>prot_P-wetherbeei_contig6768.1.1 ID=prot_P-wetherbeei_contig6768.1.1|Name=mRNA_P-wetherbeei_contig6768.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=294bp
MRTLGRQFTPLLEGLVRLVVEQFARALGSPLLYLSSIVVTDFGREPGYAA
PLFEMLQRLSAAAAPCLESLDHLTAHPDVVEEYFYLVERVLSHCPEPLVV
SPLLESVLMCGTEGLRLHHREARKGVLSCLETLVGLGLPGGGRHGGGGRD
SGGSSGGGDGRAAVAMNGDDADGDSSVHRLRIEALLASRGAELVQGLVGC
CVGDLPAYALDGPSGSVAGLMWKLTLLRPQWMQEWMAASLAQVNGSTVPP
QQRGNFLRQLLEEAAADDRDAFVDTVRRFSHMARQNARRWNSG*
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mRNA from alignment at P-wetherbeei_contig6768:265..2896+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6768.1.1 ID=mRNA_P-wetherbeei_contig6768.1.1|Name=mRNA_P-wetherbeei_contig6768.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2632bp|location=Sequence derived from alignment at P-wetherbeei_contig6768:265..2896+ (Phaeothamnion wetherbeei SAG_119_79)
TGGTTCGGCAGACACCGCTGCGGGAGATGGTGGCGGGGCGTCTCCAGGCA GAGGAGGGGCGTCGGTGGCGGCGGCATCGTCGTCGTCGCGGGCGGCGGCG GCGAGCGAGGAGCGGGCGGCTGGGCGGGAAGTGGACCGGCTGACATGCAT CGTGCGGCATATCAACCCGCGGCTCCTGCCTGGCGGCTCGCAGCACCCCC TGCTGTGCCCCTTCTGTGAGCTGTGGCCCGTGCTGGCGGCGCTGCTGCGG CGGCACGAGCGCAGTGACGCCTTCGTCGAGAAGTACTGCCGCTGCGTCAA GCACGCAATGCGCACGTTGGGCCGGCAGTTCACGCCGCTGCTGGAAGGGC TGGTGCGGCTGGTCGTGGAGCAGTTTGCCCGGGCGCTCGGCTCGCCGCTT CTGTACCTTAGCAGCATCGTCGTGACGGACTTCGGGCGGGAGCCCGGCTA CGCGGCGCCGCTGTTTGAGATGCTGCAGCGGCTGAGTGCGGCGGCGGCGC CTTGCCTGGAGTCGCTTGACCACCTGACGGCGCATCCGGATGTGGTTGAA GAGTACTTTTACCTCGTTGAACGCGTGCTGTCGCACTGCCCCGAGCCGCT CGTCGTCAGGTGAGTGAGCGGAGTGGCAGCGGAGCAGGAGAGAGGGAGAG AGACGGTGAAGGTAGGAAGAAATGGCGGTTTGTGAGGAAAGAGGAAGCCA GGAAAAGAAAGAAGAATAAGGTGACGCGGGAACGAAAGGTTGGAGGAAAG AGGGAGGGTGAATGCGGCAAGTAGGCAGGAGTCCGGGGGGAAATTCTGGG AGGATGGTGCCGGCGGAAACCTGGATTGGGAAAGCGGGAAATGTGTGGCA AGATTGGAAGCCGATGGAAGGAGGGCAATGGTGTGCTTCGTAATGTCTGG TTTGGGGTCCTTTTTTTGAGGTCACGTTTGCAAATGCGTGTTCCAGCATC GCCCAACTCAGCGCTCAACGTCGGTTTCGCATCCGCCTTTTTTTTGTATT TGCTGCCTGCTCCGCCCGCCTGCTGGCAGCCCGTTGCTCGAGTCCGTGCT GATGTGCGGCACGGAAGGGCTCCGGCTGCATCACCGCGAGGCCCGTAAGG GCGTCTTGAGCTGCCTGGAGACTCTCGTCGGCCTCGGCCTTCCCGGTGGC GGCCGGCATGGCGGCGGCGGCCGCGACAGCGGCGGGAGCAGCGGCGGCGG CGACGGGCGGGCGGCGGTCGCCATGAACGGGGATGACGCCGACGGCGACA GCAGCGTCCACCGGCTGCGGATAGAGGCGCTGCTGGCGTCGCGGGGGGCG GAGCTGGTGCAAGGCCTTGTTGGGTGCTGTGTGGGCGACCTGCCGGCGTA CGCGCTGGACGGCCCCAGCGGCTCCGTAGCGGGCCTCATGTGGAAGCTGA CGCTGCTGCGCCCGCAGTGGATGCAGGTGAGAAAGAGAAGAAAGTGTGGG GGACACATGGCATTTTCCCTCCTCGTCTCCCAACGTCAACCGAAAACGGG CGACGTTTTTGTCCCCCAATATATCGCATTTCTTCTGACGTCTCTCTGGA TGTGCGTTGAAATTGTATGAAGGGTGGGGCTGAGAAAACCGCTATTCTGT CTGGGTCCCTTTATTGCGATCTGCTGCTGCTTGTACCTAGAATCCGTTAA CCACTTGTACGCAACTGATGCGGGAAAAGCGGTCAAAGGCGAAAAGCAAG GCGCTTTTGGAAAATTTGCCGCGTGGTTGAGGAATCTTCTTGTTTTCCCC CAGGGAAAGTTCGGTAACAGTTTATCTGCTTGCATGCAATACTTCCCTGT GTTTCAAAATATGCCAGTCCATTGGACGCAAACACCCTTTGAACGCGTTG CGAAAGCGGATACGGCGGATAAAATAGTCAAATTGTGCCAGGACATCTGC GTTATTTCGAGAATGATGCAGAGGGACGTGTTCTTACTTCTTGTAGTTGT CCATTGTGTACGAACCCCCACTGGGCCCGGCGTCCGGGATTGGGGCTGGA CGATCAGCGAGATGCAATGGTTCGGGGCCTCCCCTTCCGCTAGATTTTAT ATCCGAAATGGGGCCTTTCCCTCAAAATTAGACGTGCCGCCGACCTAAAT CCCGACACACAGCCTTCTCGCTTCCCCTGCGCCAAATCGGACCAAACCAC GCCGGTTACCGTTCGAATTTTTCAACCCGCAACCCGCCTCGTTTTCGGCT TGCGGCTCGCGTTCGTTCGGCAGGAATGGATGGCGGCGTCGCTGGCACAA GTGAACGGCAGCACGGTGCCGCCGCAGCAGCGGGGAAACTTCCTTCGGCA GCTGCTAGAGGAGGCCGCCGCCGACGACCGCGACGCCTTCGTCGACACCG TCCGGCGGTTCAGCCACATGGCGCGGCAGAACGCGAGGCGGTGGAACAGC GGGTAGAGCCGTGAGAGAAAAGCATAGCAGGCCCACGAAGACTGCGGGAA AGAGGTGGGATCCCAGGAGAGGGGAAAAGCGGCCGCCAATCGCATGAATG GCGGCACCGTCAGCGCCCCTCCTGAAAGAATATGCTAAAGCTTAACATCT CCTCTCAGCCATGGCGCGCTGCATGAGCGAATCCCTTCTTGGCTGTGGGT AGTTGTGGTTAATCTCTTTTGATGAAACAGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6768:265..2896+

>mRNA_P-wetherbeei_contig6768.1.1 ID=mRNA_P-wetherbeei_contig6768.1.1|Name=mRNA_P-wetherbeei_contig6768.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=882bp|location=Sequence derived from alignment at P-wetherbeei_contig6768:265..2896+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCACGTTGGGCCGGCAGTTCACGCCGCTGCTGGAAGGGCTGGTGCG
GCTGGTCGTGGAGCAGTTTGCCCGGGCGCTCGGCTCGCCGCTTCTGTACC
TTAGCAGCATCGTCGTGACGGACTTCGGGCGGGAGCCCGGCTACGCGGCG
CCGCTGTTTGAGATGCTGCAGCGGCTGAGTGCGGCGGCGGCGCCTTGCCT
GGAGTCGCTTGACCACCTGACGGCGCATCCGGATGTGGTTGAAGAGTACT
TTTACCTCGTTGAACGCGTGCTGTCGCACTGCCCCGAGCCGCTCGTCGTC
AGCCCGTTGCTCGAGTCCGTGCTGATGTGCGGCACGGAAGGGCTCCGGCT
GCATCACCGCGAGGCCCGTAAGGGCGTCTTGAGCTGCCTGGAGACTCTCG
TCGGCCTCGGCCTTCCCGGTGGCGGCCGGCATGGCGGCGGCGGCCGCGAC
AGCGGCGGGAGCAGCGGCGGCGGCGACGGGCGGGCGGCGGTCGCCATGAA
CGGGGATGACGCCGACGGCGACAGCAGCGTCCACCGGCTGCGGATAGAGG
CGCTGCTGGCGTCGCGGGGGGCGGAGCTGGTGCAAGGCCTTGTTGGGTGC
TGTGTGGGCGACCTGCCGGCGTACGCGCTGGACGGCCCCAGCGGCTCCGT
AGCGGGCCTCATGTGGAAGCTGACGCTGCTGCGCCCGCAGTGGATGCAGG
AATGGATGGCGGCGTCGCTGGCACAAGTGAACGGCAGCACGGTGCCGCCG
CAGCAGCGGGGAAACTTCCTTCGGCAGCTGCTAGAGGAGGCCGCCGCCGA
CGACCGCGACGCCTTCGTCGACACCGTCCGGCGGTTCAGCCACATGGCGC
GGCAGAACGCGAGGCGGTGGAACAGCGGGTAG
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