prot_P-wetherbeei_contig6757.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6757.1.1
Unique Nameprot_P-wetherbeei_contig6757.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length410
Homology
BLAST of mRNA_P-wetherbeei_contig6757.1.1 vs. uniprot
Match: A0A7S2FX27_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FX27_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.060e-19
Identity = 57/140 (40.71%), Postives = 83/140 (59.29%), Query Frame = 0
Query:    1 MIAADEAVLSLLVRGCLELPLPRDAAFVAECAKRLVLLSPEPRGFVAMATTALDEGLVRFAVQEVLESPELMVAGAVLDPSATKVHIVELLKTLAAHPSLAARMADLFDDLPAWRKYKHQDHDLFMATEAPVDYFLTDDT 140
            +IA+ E VL +++R  L   L RDAAF+ +    L   S +  G+  +  T++   L    +++VLE+P+L     V+DP+A KVH V LLK L    +   ++ ++ D  PAWRKYKHQDH LF+  +  VDYFLT DT
Sbjct:   78 LIASPEGVLKVMLR-LLVPDLSRDAAFIVQGLLSL-FQSKKAHGYPILVETSIANSLTTKLLEDVLENPQL---AQVIDPAACKVHTVSLLKLLVEDMTYGDQIGEILDGHPAWRKYKHQDHTLFLTADQRVDYFLTSDT 212          
BLAST of mRNA_P-wetherbeei_contig6757.1.1 vs. uniprot
Match: A0A7R9U7A2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7A2_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.890e-14
Identity = 45/128 (35.16%), Postives = 78/128 (60.94%), Query Frame = 0
Query:   22 PRDAAFVAECAKRLVLLSPEPRGFVAMATTALDEGLVRFAVQEVLESPELMVAGAVLDPSATKVHIVELLKTLAAHPSLAARMADLFDDLPAWRKYKHQDHDLFMATEAPVDYFLTDDTEALGRKLLL 149
            P D+AF+ E   ++V     P+   A+ +TA+ +GL+ + ++ VLE  E  ++  + DP A +VHI+++LKTLAAHP + A +  + +   +W +Y  Q  +L++  E  VDYFLT+D+  +   LL+
Sbjct:  274 PPDSAFILEAMAKVVCSECRPQSLKALLSTAIADGLIVWLLK-VLEDKEDKLSD-IRDPEAARVHIIQILKTLAAHPEIGAHVNSVLEKNESWEQYTGQRQELYLTAEHRVDYFLTNDSHKVESLLLI 399          
BLAST of mRNA_P-wetherbeei_contig6757.1.1 vs. uniprot
Match: A0A7S2RGR7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGR7_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.100e-12
Identity = 46/110 (41.82%), Postives = 64/110 (58.18%), Query Frame = 0
Query:   43 RGFVAMATTALDEGLVRFAVQEVLESPELMVAGAVLDPSATKVHIVELLKTLAAHPSLAARMADLFDDLPAWRKYKHQDHDLFMA-TEAPVDYFLTDDTEALGRKLLLTA 151
            +G  A    A+   L +F V++VLE+P L+    V DP++ KVH +ELLK L   P+   +   + D +  W+KYK+QDH LF+   E  +DYFL D  E  G K LLTA
Sbjct:  201 KGRSAFLNAAIKLELAKFLVEQVLENPTLI---NVKDPASVKVHSIELLKLLTLDPAYGLQFNIILDSISLWKKYKNQDHSLFITGVEQKIDYFLLDGVE--GNKKLLTA 305          
BLAST of mRNA_P-wetherbeei_contig6757.1.1 vs. uniprot
Match: A0A7S2P8T3_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P8T3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 8.550e-12
Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = 0
Query:   44 GFVAMATTALDEGLVRFAVQEVLESPELMVAGAVLDPSATKVHIVELLKTLAAHPSLAARMADLFDDLPAWRKYKHQDHDLFMA-TEAPVDYFLTDDTEALGRKLLLT 150
            G  A+  +AL   L RF V+ VLE+   +    VLDP+A KVH V+L K L   P    +   + D L  WRKYK QDH LF+  +E  VDYFLTD       K +LT
Sbjct: 3095 GRTALLESALQYELPRFLVEHVLENAASL--SRVLDPAAAKVHAVDLCKLLCRDPGYGLKFRLILDSLEGWRKYKDQDHSLFITGSEQKVDYFLTDGGAGAASKKMLT 3200          
BLAST of mRNA_P-wetherbeei_contig6757.1.1 vs. uniprot
Match: A0A7S3P865_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P865_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 6.830e-11
Identity = 42/99 (42.42%), Postives = 52/99 (52.53%), Query Frame = 0
Query:   44 GFVAMATTALDEGLVRFAVQEVLESPELMVAGAVLDPSATKVHIVELLKTLAAHPSLAARMADLFDDLPAWRKYKHQDHDLFMATEAPVDYFLTDDTEA 142
            G V +   AL   L +F V + LE+  L     + DP+A KVH V LLK L   P    +   +  DLPAW KYK QDH L +AT    DYFLT   +A
Sbjct:   16 GRVTLLHQALACRLCQFLVNDFLENVSL---EEIKDPAAGKVHAVNLLKLLTMDPGYGMKFKLILKDLPAWSKYKSQDHSLMLATTKRTDYFLTAGEQA 111          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6757.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7S2FX27_9STRA2.060e-1940.71Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7R9U7A2_9STRA3.890e-1435.16Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2RGR7_9STRA2.100e-1241.82Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2P8T3_9STRA8.550e-1243.52Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S3P865_9STRA6.830e-1142.42Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 326..408
e-value: 5.6E-8
score: 34.7
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 326..407
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..198
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 330..404
e-value: 2.77955E-6
score: 42.9391
IPR001478PDZ domainPROSITEPS50106PDZcoord: 330..408
score: 11.7423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6757contigP-wetherbeei_contig6757:913..2870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6757.1.1mRNA_P-wetherbeei_contig6757.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6757 594..2927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6757.1.1 ID=prot_P-wetherbeei_contig6757.1.1|Name=mRNA_P-wetherbeei_contig6757.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=410bp
MIAADEAVLSLLVRGCLELPLPRDAAFVAECAKRLVLLSPEPRGFVAMAT
TALDEGLVRFAVQEVLESPELMVAGAVLDPSATKVHIVELLKTLAAHPSL
AARMADLFDDLPAWRKYKHQDHDLFMATEAPVDYFLTDDTEALGRKLLLT
AAGHAQPPSPQQQPPPWQPQPEQPLACSPPTSASQPPPPPPPLLSPLRQR
GSPPDGGVAGTSGGACGGCPAVVGGMADADPLTGFLQPTGGASSIAGWMD
GLGGAGGGGSGGGGGAAAGPFGAAVAAHTFGGGGPAAAGGGGGDGGGDGG
GNWMDGRSAGGAGNPGGGGGPGGGPGSAVHVTIVKDPVLGLGIDLKKEGE
TMVVKAVKPEARFAGPRQLQDGDVIAAVGGVVCETFTKGVRLLKAAEGEI
HLIVSRRRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036034PDZ_sf
IPR001478PDZ