mRNA_P-wetherbeei_contig6756.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A835Z0R6_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R6_9STRA) HSP 1 Score: 311 bits (798), Expect = 1.040e-97 Identity = 201/385 (52.21%), Postives = 259/385 (67.27%), Query Frame = 1
Query: 334 FEAGQLFERF-SDRDGRLSRGDFERLMSAEMSKRSITPPSPPP------PLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAA--------YRLSGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRVEAEQNLAREYAAEAAEWAALTERLTAELAAAR 1443
FE GQLFERF SD+DGRL+R +FE+LM+ + ++ P P P GS PP P R H A A R AA Y + A+ PLTHYNET GVPL ++A+ + +LGHTVVPLHEAYSRRL+RLQALV+S+L+PAREQLLQLRRRL AR +EV++A+AA+ERET ADA ++ERLRSAEALK+ATL QR +DV+ EL +DR+A+Q+AGA G GG +G A RY HEFE+ +M+ELVQSY +LCA++E++A+R D I+VT +DFP+ETAERLEVLRRADRYE+ALA+KDQ++W L+QE + + AE L++EYA E AEW LT RLTA+++ R
Sbjct: 48 FEIGQLFERFDSDKDGRLTRAEFEKLMNLRVQQQRQQAPDPDQYSAATAPTRLPGSPSPPRPPHHQRQ------RHMAADAPNMRWSQPAPAASAAAPSYGYPILPGAL--PLTHYNETAGVPLRKDAVEEQVALGHTVVPLHEAYSRRLARLQALVTSKLLPAREQLLQLRRRLLARGEEVQSAKAAIERETMADAHTILERLRSAEALKMATLEQRMSDVATELEQLDRLAQQVAGAAGTQEQG------------GGMAG-AERYTHEFESTAKMIELVQSYGDLCASVERAASRLQDTSIAVTPNDFPQETAERLEVLRRADRYEKALAIKDQMIWNLMQEASHVVEKATAEAVLSKEYANEMAEWVDLTNRLTAQISELR 411
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: D7FKD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD4_ECTSI) HSP 1 Score: 275 bits (703), Expect = 2.250e-84 Identity = 181/364 (49.73%), Postives = 232/364 (63.74%), Query Frame = 1
Query: 334 FEAGQLFERF-SDRDGRLSRGDFERLMSAEMSKRSITPPSPPPPLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAAYRLSGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRVEAEQNLAREYAAEAAEWAALTERLT 1422
FE GQLF++F +D DGRL R DFER++ + + G D +R S +GP +THY+ETTGVPL REA+ ++ +LGHTVVPL EAYSRRLSRLQ+L SSRLMP RE+LLQLRRRLH R +E+ AARAA+ERET ADA A+VERLRSAE LK ATLAQ V+AEL ++++++Q+A L ++ PG +S P+A A +FE RMVELVQSY ELC +I++ AN+P D I V ADDF ETAERLEVLRRADRYE AL+VKDQ++W +QE+Q LE + + E++L +E+A EA EW LTE+L+
Sbjct: 7 FEFGQLFQKFDTDGDGRLGRADFERMVGGMLEQ-----------FGERGED-------GTRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXS--PVGPSITHYDETTGVPLAREAVASQQALGHTVVPLREAYSRRLSRLQSLASSRLMPVRERLLQLRRRLHGRGEELTAARAAIERETLADAEAIVERLRSAETLKQATLAQGVNSVTAELEGVEKLSDQVARVTLLPSST-PGSMS-----------PSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFSHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERSLGQEFAEEAQEWVTLTEKLS 338
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A6H5JBH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH8_9PHAE) HSP 1 Score: 229 bits (584), Expect = 3.460e-66 Identity = 179/465 (38.49%), Postives = 235/465 (50.54%), Query Frame = 1
Query: 175 VDAKEFQRLWRDR---------IQRGPLGASAAXXXXXXXXXQSGALSGATTSGAPLPAHLTFEAGQLFERF-SDRDGRLSRGDFERLMSAEMSKRSITPPSPPPPLTTHGSDQPPLPAAASRDPFDPASSHSGAGAGVNRQQGSDNAAYR-------LSGAAMGPPLTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQ--------------------------------ETQGLEHRVEAEQNLAREYAAEAAEWAALTERLT 1422
VDAK+FQR+WR+R G +G + G G + FE G+LF++F +D DGRL R DFERL+ + + + G D + G+ G + +AA + GP +THY+ETTGVPL REA+ ++ +LGHTVVPL EAYSRRLSRLQ LRRRLH R +E++AARAA+ERET ADA A+VERLRSAE LK A L Q V+AEL ++++++Q A + + L A +FE RMVELVQSY ELC +I++ AN+P D I V ADDFP ETAERLEVLRRADRYE AL+VKDQ++W +Q E+Q LE + + E++L RE+A EA EW LT +L+
Sbjct: 14 VDAKDFQRVWREREHLFSEPDPAPGGDVGGREEASRPGGEARREGRRE---EGGGGVGPEKIFEFGKLFQKFDTDGDGRLGRADFERLVGGMLEQ-----------VGERGGD----------------GTRRGSRGGEXDNGNAPSAAPQPLPXXXXXXXXXAGPSITHYDETTGVPLAREAVASQQALGHTVVPLREAYSRRLSRLQ----------------LRRRLHGRGEELRAARAAIERETLADAEAIVERLRSAETLKQAMLTQGVNSVTAELEGVEKLSDQTACRVL---------MDLVCAT-------------DFEGTERMVELVQSYRELCNSIDRVANKPFDPTIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQVSDCRLQSSEMLADKVASEVSPVVSLTTALSSESQRLEEKCQEERSLGREFAEEAQEWVTLTGKLS 410
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A7S3MHC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 6.780e-17 Identity = 49/124 (39.52%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 625 LTHYNETTGVPLPREAMTTEASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQM 996
LTHY+ET GV + R + S+GH +VPL +AY R +L+A+++ RL+P RE LLQLRR+L ++EV A + +E+ET D ++ RL SAE+ + A + + + EL ++RI +++
Sbjct: 72 LTHYDETAGVAIARYDVDQNKSMGHIIVPLTDAYKSRYEKLRAILTGRLLPKREHLLQLRRKLQKASEEVHAKKENIEKETRTDTDQILRRLDSAESFRQAAILSQVMKIDEELQGIERIVKRV 195
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A2K3DR50_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DR50_CHLRE) HSP 1 Score: 92.8 bits (229), Expect = 2.800e-16 Identity = 83/240 (34.58%), Postives = 123/240 (51.25%), Query Frame = 1
Query: 634 YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRV 1347
Y++TT V + M E A GH ++PL +AY +L+ LQA V+ +L+ RE LLQ RL ARA EV AARA +ER+ AA A ++ ++RSAE+LK A L + A+V A+L A+ R+ + +S SAA GPA + + +Y L A ++ RP E+ V ADD P E ++ + LAVKDQ++ LLQE + ++ +
Sbjct: 331 YDDTTQEVVYADDVMARELAKQGHALLPLGDAYRGKLAALQAAVNGQLLAKREALLQQHARLAARAGEVAAARAGLERDVAALAEDMLGKVRSAESLKQALLGREQAEVDAQLDAIGRLLNDI--------------VSASAA------GPA--------------DFLNAYRRLADACDRLVARPFKSEVDVAADDLPSEAGVYRQLAEAHGALAKLLAVKDQMIAHLLQEREAMQEEL 536
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A7S1C795_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C795_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 3.520e-16 Identity = 69/183 (37.70%), Postives = 95/183 (51.91%), Query Frame = 1
Query: 718 EAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRAD 1266
EAY +L L A VS+ LM RE+++Q + ARA+EVKAAR A+ERET AD A++ RLRSAEA KL+ L+ +++ ++ A+D Q A A GG GG+ +Q +PEL A ++ A +PV + V ADDF RE R E RRA+
Sbjct: 11 EAYRAKLGSL-ASVSATLMAKRERIVQQALSVQARAEEVKAARRAIERETTADTEAILHRLRSAEAFKLSLLSHDLSELQVDIAAIDAFQAQFA--QAHPQQGGGGGMXX------------------XXXXXASAAFLQKFPELAAEADRLAAKPVKLSVDVRADDFDREVFRRNEAARRAE 172
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A7R9UFR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR6_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 3.250e-15 Identity = 59/136 (43.38%), Postives = 86/136 (63.24%), Query Frame = 1
Query: 781 REQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPV 1188
REQL+ L RR +R D+++A RAAVER T D ++VERLRSAEALKL+TL + +++ A+L A+DR+ EQ+ GA ++GG G + GG GP +E++Q +PELCA I++ ++RPV
Sbjct: 2 REQLMNLLRRTRSRMDDIRARRAAVERTTMQDVESIVERLRSAEALKLSTLGGQLSELQADLEAIDRVTEQVEGAR---SSGGVGTGVVDV--GGHDLGPLG-----------SLEIIQMFPELCATIDRLSSRPV 121
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A835T3Y5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T3Y5_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 4.860e-15 Identity = 81/240 (33.75%), Postives = 120/240 (50.00%), Query Frame = 1
Query: 634 YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRV 1347
Y++TT V + M E A GH ++PL +AY +L+ LQA V+ +L+ RE LLQ RL ARA EV AARA +ERE +A A ++ ++RSAE+LK A L + A+V +L A+ R+ + +S SAA GP V+ + +Y L ++ RP E+ V ADD P E ++ + LAVKDQ++ LLQE ++ +
Sbjct: 338 YDDTTQEVVYADDVMARELAKQGHALLPLGDAYRGKLAALQAAVNGQLLAKREALLQQHARLAARAGEVAAARAGLEREVSALAEDMLGKVRSAESLKQALLGREQAEVDGQLDAIGRLLTDV--------------VSASAA------GP--------------VDFLNAYRRLADTCDRLVARPFKSEVDVAADDLPAEAGVYRQLAEAHGALAKLLAVKDQMIAHLLQERDAMQEEL 543
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A835SKQ4_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835SKQ4_CHLIN) HSP 1 Score: 87.0 bits (214), Expect = 9.450e-15 Identity = 93/293 (31.74%), Postives = 141/293 (48.12%), Query Frame = 1
Query: 499 AAASRDPFDPASSHSGAGAGVNRQ----QGSDNAAYRLSGAAMGP---PLTH-YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGLEHRV 1347
A+A DP S SGA A + Q ++A + +G +GP PL+ Y++TT V + M E GH ++PL +AY +L+ LQA V+ +L+ RE LLQ RL ARA EV AARA +ERE A A ++ ++RSAE+LK A L + A+V +L A+ R+ ++ A A +GP V+ + +Y + ++ RP E+ V ADD P E ++ + LAVKDQ++ LLQE ++ +
Sbjct: 94 ASALLDPMHALSLQSGAAAHQHPQLLQLPPVPHSALQPNGVMLGPGGQPLSLLYDDTTQEVVYADDVMARELGKQGHALLPLGDAYRGKLAALQAAVNGQLLAKREALLQQHARLAARAGEVAAARAGLEREVTALAEDMLGKVRSAESLKQALLGRDQAEVDGQLDAIGRLLGEVVAASA--------------------AGP--------------VDFLNAYRRMADTCDRLVARPFKSEVDVAADDLPAEAGVYRQLAEAHGALAKLLAVKDQMISHLLQERDAMQEEL 352
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Match: A0A8J4CWX4_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CWX4_9CHLO) HSP 1 Score: 83.2 bits (204), Expect = 3.370e-13 Identity = 78/236 (33.05%), Postives = 111/236 (47.03%), Query Frame = 1
Query: 634 YNETTG-VPLPREAMTTE-ASLGHTVVPLHEAYSRRLSRLQALVSSRLMPAREQLLQLRRRLHARADEVKAARAAVERETAADAGAVVERLRSAEALKLATLAQRAADVSAELIAMDRIAEQMAGAMALANTGGPGGLSLSAAAGGGPSGPAARYAHEFEAAHRMVELVQSYPELCAAIEKSANRPVDWEISVTADDFPRETAERLEVLRRADRYEQALAVKDQVVWTLLQETQGL 1335
Y+ET V L M E A GH + PL +AY +L+ LQA V+ L+ RE L+Q RL ARA EV A RAA+ERE A +V R+R AE+LK + LA+ +DV A+L A+ R+ + A A +GP V+ + +Y L + ++P + V DD P E A ++ + Q L VKDQ++ LL+E L
Sbjct: 329 YDETMQEVVLADAVMVKELAKQGHGLAPLADAYRTKLAALQAAVNGPLLAKREALMQQHARLAARAGEVAAQRAALEREVAVLTEDMVGRIRGAESLKQSVLAREQSDVGAQLDAIQRLLGDIMAASA--------------------AGP--------------VDFLNAYSRLTDTCHRLVSKPFKQVVDVAVDDLPAEAAVYRDLAASHEALTQLLGVKDQMISHLLKERDAL 530 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6756.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6756.1.2 >prot_P-wetherbeei_contig6756.1.2 ID=prot_P-wetherbeei_contig6756.1.2|Name=mRNA_P-wetherbeei_contig6756.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=514bp ATAKRSSSRRSRSAEDGNGASPISNGKANGGSSSSGTEPSPDFEAGLLFEback to top mRNA from alignment at P-wetherbeei_contig6756:2..3073- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6756.1.2 ID=mRNA_P-wetherbeei_contig6756.1.2|Name=mRNA_P-wetherbeei_contig6756.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3072bp|location=Sequence derived from alignment at P-wetherbeei_contig6756:2..3073- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6756:2..3073- >mRNA_P-wetherbeei_contig6756.1.2 ID=mRNA_P-wetherbeei_contig6756.1.2|Name=mRNA_P-wetherbeei_contig6756.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1542bp|location=Sequence derived from alignment at P-wetherbeei_contig6756:2..3073- (Phaeothamnion wetherbeei SAG_119_79)back to top |