mRNA_P-wetherbeei_contig6740.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: A0A482S130_9ARCH (Pyridoxal-phosphate dependent enzyme n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S130_9ARCH) HSP 1 Score: 131 bits (330), Expect = 1.510e-35 Identity = 66/129 (51.16%), Postives = 91/129 (70.54%), Query Frame = 1
Query: 1 GLPRTTKIIAIGVCDSPAYFYHHIDDIAASMGVPVSV-GHAEDWLEVWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQLTGIL 384
G+ T++ IGVCDSP YFY HI ++A ++GV ++ G E W +++ G G GY ST EELQ+LAD++ +TG+LLDPVYSGK A H +HK++ E R +G+R+LF HTGG LG++DK QL IL
Sbjct: 108 GVSGRTQLHCIGVCDSPQYFYEHIREVATTLGVDLAQHGEMETWCKIYDGQGIGYARSTVEELQFLADLSSSTGLLLDPVYSGK-AFHFMMHKLLPTEVFR-QGQRVLFLHTGGTLGLYDKETQLLPIL 234
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: A0A7S3GRW1_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRW1_9STRA) HSP 1 Score: 125 bits (315), Expect = 4.040e-32 Identity = 60/128 (46.88%), Postives = 91/128 (71.09%), Query Frame = 1
Query: 13 TTKIIAIGVCDSPAYFYHHIDDIAASMGVPVS-VGHAEDWLEVWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPER---FRGRRILFWHTGGALGMFDKAEQLTGIL 384
TT++ A+GVCDSP YFYHHI + AA +G+ +G ED L ++ G G+GY ST +EL+++ VA+TTG++LDPVYSGK L+ FVHKV+ ++ G+++L+ HTGG +G++DK +Q+ +L
Sbjct: 246 TTQVHAVGVCDSPEYFYHHIAETAAELGLTTDQLGPVEDLLHLYAGEGQGYARSTDDELEFIIKVAQTTGIILDPVYSGK-GLYHFVHKVLPDNAKKAAFLPGQKVLYIHTGGTVGLYDKEDQVVKLL 372
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: A0A7S2WWB8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWB8_9STRA) HSP 1 Score: 124 bits (312), Expect = 1.010e-31 Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = 1
Query: 10 RTTKIIAIGVCDSPAYFYHHIDDIAASMGVPVSVGHAEDWLEVWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKA 363
R TK+ A+GVCDSP+YFY +DD G+ S+ +E WL V G G GY VST EEL + V TTGVLLDPVYSGK AL+ F + PE F G+ ILFWHTGG GM+DKA
Sbjct: 267 RGTKVHAVGVCDSPSYFYKFVDD-EILPGIGHSLPCSESWLRVIQGRGRGYAVSTPEELDIIKRVCETTGVLLDPVYSGK-ALYKFC-ETAKGSPEEFAGKSILFWHTGGGFGMYDKA 381
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: K0RA64_THAOC (PALP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RA64_THAOC) HSP 1 Score: 121 bits (304), Expect = 2.570e-30 Identity = 63/119 (52.94%), Postives = 84/119 (70.59%), Query Frame = 1
Query: 31 IGVCDSPAYFYHHIDDIAASMGVP-VSVGHAEDWL----EVWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQL 372
IGVCDSP YFY I IA +MG+ +S ED++ +V HG G GY VS+ EEL++++ A TG+ LDPVYSGK AL+ F+ KV+ EPE++RG++ILFWHTGGALG ++K L
Sbjct: 270 IGVCDSPDYFYTTIASIADAMGLKKMSHSSTEDFIRSIIKVHHGKGRGYAVSSDEELRFISQFAVDTGICLDPVYSGK-ALYHFMTKVLEEEPEKYRGQKILFWHTGGALGTYEKGNDL 387
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: A0A7S1CYU7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYU7_CYCTE) HSP 1 Score: 119 bits (298), Expect = 5.840e-30 Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 1
Query: 19 KIIAIGVCDSPAYFYHHIDDIAASMGVPVSVGHAEDWLE----VWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQLT 375
++ A+GVCD P YFY ++ IA MG+ G D+++ G G GY ST EEL++++ + TG+ LDPVYSGK H FV KV+ A P+ +RG+ ILFWHTGGALGM+DK L+
Sbjct: 197 QVHAVGVCDDPDYFYDYVAGIAEEMGLESDEGGTLDFIQQHMTAHQGKGLGYASSTPEELEFVSQFSLETGIALDPVYSGKALFH-FVTKVLTANPDDYRGKNILFWHTGGALGMYDKGNDLS 318
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: B7GAJ9_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAJ9_PHATC) HSP 1 Score: 118 bits (296), Expect = 8.770e-30 Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 1
Query: 19 KIIAIGVCDSPAYFYHHIDDIAASMGVP-VSVGHAEDW-----LEVWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQL 372
K++A+GVCD P YFYHH+ IA MG+ +S G + + + V G G GY +ST EEL++ A AR TG++LDPVYSGK AL +FV +++ +P FR + ILFWHTGGALG++DK L
Sbjct: 206 KVMAVGVCDDPDYFYHHVASIADQMGLQNLSGGMSTEAFVRQNMNVLQGKGCGYAISTPEELEFAAHFARDTGIVLDPVYSGK-ALFAFV-RLMEEDPACFRDKNILFWHTGGALGLYDKVPSL 327
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: A0A7S4VX31_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VX31_9STRA) HSP 1 Score: 116 bits (290), Expect = 3.840e-28 Identity = 61/129 (47.29%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 10 RTTKIIAIGVCDSPAYFYHHIDDIAASMGVPVSVGHAEDWLE--------VWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQL 372
+ KI A+GVCD+P YFY+ + IA MG + + LE V G G GY ST EEL + A TG++LDPVYSGK AL+ FV V+ +PE FR +LFWHTGGALGM++K+E+L
Sbjct: 289 KAPKIHAVGVCDNPDYFYNEVSKIANEMGFALPTSSSCTTLEELIHNHLIVHQGKGLGYARSTTEELNFCTQFAIETGIVLDPVYSGK-ALYHFVTTVLEEDPEAFRDSNVLFWHTGGALGMYEKSEEL 416
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: B8BWK9_THAPS (PALP domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWK9_THAPS) HSP 1 Score: 114 bits (284), Expect = 1.800e-27 Identity = 60/123 (48.78%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 19 KIIAIGVCDSPAYFYHHIDDIAASMGVPV-SVGHAEDWLE----VWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQL 372
K+ A+GVCDSP+YFY+ I +A MG+ + S E ++ V G G+GY ST EEL ++ + TG+ LDPVYSGK AL+ F+ KVV +PE +R + ILFWHTGGALG++DK + L
Sbjct: 263 KVHAVGVCDSPSYFYNTITTMADGMGISLDSDTTTEQFVRNSVIVHQGKGQGYASSTDEELDFILLFSLETGISLDPVYSGK-ALYHFLKKVVEDDPEAYRDKSILFWHTGGALGIYDKGDDL 384
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: X0U1L8_9ZZZZ (PALP domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0U1L8_9ZZZZ) HSP 1 Score: 109 bits (272), Expect = 1.990e-27 Identity = 64/137 (46.72%), Postives = 83/137 (60.58%), Query Frame = 1
Query: 4 LPRTTKIIAIGVCDSPAYFYHHIDDIAASMGV------PVSVGHAEDWLE----VWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQLTGIL 384
LPR I A+GVCD P YFY+ I IA MG+ P S ED++ V G G GY STAEEL ++ A TG++LDPVYSGK A++ F+ K + P+ +R RI+FWHTGG+LG ++K E LT L
Sbjct: 53 LPR---IHAVGVCDDPDYFYYTIASIAREMGLDLSSLLPTSEISMEDFVRDHMFVHQGKGLGYASSTAEELDFIVKFALETGIVLDPVYSGK-AMYQFM-KEMQENPDSYRNSRIVFWHTGGSLGNYEKIESLTATL 184
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Match: A0A7S1BJI2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJI2_9STRA) HSP 1 Score: 113 bits (283), Expect = 3.630e-27 Identity = 58/124 (46.77%), Postives = 79/124 (63.71%), Query Frame = 1
Query: 19 KIIAIGVCDSPAYFYHHIDDIAASMGV--PVS----VGHAEDWLEVWHGSGEGYGVSTAEELQYLADVARTTGVLLDPVYSGKKALHSFVHKVVAAEPERFRGRRILFWHTGGALGMFDKAEQL 372
+I A+GVCD+P YFY + I MG PV+ L V G G GY +ST+EEL ++ VA TTG++LDPVY+GK ALH F++ VV + + F G+ +L+WHTGG LG+FDK +L
Sbjct: 282 QIHAVGVCDNPEYFYKTVTSIITDMGYVSPVTKEDIANRVRRILVVHQGKGRGYAISTSEELNFVKKVAATTGLVLDPVYTGK-ALHHFLNVVVEQDKKLFEGKTVLYWHTGGGLGVFDKVPEL 404 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6740.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6740.1.2 >prot_P-wetherbeei_contig6740.1.2 ID=prot_P-wetherbeei_contig6740.1.2|Name=mRNA_P-wetherbeei_contig6740.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=128bp GLPRTTKIIAIGVCDSPAYFYHHIDDIAASMGVPVSVGHAEDWLEVWHGSback to top mRNA from alignment at P-wetherbeei_contig6740:29..673+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6740.1.2 ID=mRNA_P-wetherbeei_contig6740.1.2|Name=mRNA_P-wetherbeei_contig6740.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=645bp|location=Sequence derived from alignment at P-wetherbeei_contig6740:29..673+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6740:29..673+ >mRNA_P-wetherbeei_contig6740.1.2 ID=mRNA_P-wetherbeei_contig6740.1.2|Name=mRNA_P-wetherbeei_contig6740.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=384bp|location=Sequence derived from alignment at P-wetherbeei_contig6740:29..673+ (Phaeothamnion wetherbeei SAG_119_79)back to top |