prot_P-wetherbeei_contig6729.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6729.2.1
Unique Name	prot_P-wetherbeei_contig6729.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	566

Homology

[Close]

BLAST of mRNA_P-wetherbeei_contig6729.2.1 vs. uniprot
Match: A0A835YP60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP60_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 7.510e-7
Identity = 33/72 (45.83%), Postives = 44/72 (61.11%), Query Frame = 0

Query:   61 VTSMTDEQLLRRAGMEWSGERALSTDPMGRTLVQVCRRGYFPEVVRDALNDMWDRDLSYDDPDAVVEHLLLR 132
            + S  D   LR  G+     RA    P+   L++VCRRGY PE VR  L+ MW+ D++YD+PDAVVE L L+
Sbjct:  100 LVSAADVDELRATGL-----RASRVGPLAMVLLEVCRRGYAPEEVRVVLDSMWEADVAYDNPDAVVEQLTLQ 166

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6729.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6729.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YP60_9STRA	7.510e-7	45.83	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 513..533
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..242
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..433

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6729	contig	P-wetherbeei_contig6729:1321..3018 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6729.2.1	mRNA_P-wetherbeei_contig6729.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6729 1321..3018 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6729.2.1 ID=prot_P-wetherbeei_contig6729.2.1|Name=mRNA_P-wetherbeei_contig6729.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=566bp
VLDQEDSEGEEQAEAATKTRKKKKNRKKKKAAELDDTAGKPNAVPTKTSA
AVAVAPQGDSVTSMTDEQLLRRAGMEWSGERALSTDPMGRTLVQVCRRGY
FPEVVRDALNDMWDRDLSYDDPDAVVEHLLLRWGNEAAQAVAQSPPLPSV
AGIDAVMATAAAAESAKAATANGHTLQNGHGNSAGKGAIGDKKPAGASGK
KGVPTGAAAPTPAPIPAPAAPAAPSAAPVPAPTPPPAPPTLEARLEMAAS
HSSMTDALSAITAWASVAQPQDGGGLGALFNSDALDLLFANFIAQPAREL
DVAAPALYGLLDRIMPNLSRSAVGGASPSSLINSGASDVVNHACRAAAAL
TNLAAVDGGSTRSGAGGSKEGPAIRAVARRLADIVKGHHAAAAGALAAPA
LLREAEATVAGSAASPPHQAGRPEGVGELFTRREKRRDAALTLERACLIA
LQGQSTASKGRAGGSGSIVCGAGEAGGADDALLEALLTASAAAAASGDGG
GGGSATALTAEDVRRARSDLEAARHQLRAVRAESEARAGPLAAEADALAA
HAMELSLRRAALLEEV