mRNA_P-wetherbeei_contig6725.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A6H5L249_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L249_9PHAE) HSP 1 Score: 150 bits (380), Expect = 3.250e-39 Identity = 95/207 (45.89%), Postives = 118/207 (57.00%), Query Frame = 1
Query: 1 ETTLEAAGALFRQYSSWRLHTKYYSAPLVFWKQ-DTKPPLAASEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPDAGGDEADGGRDADA------KGATAAXXXXXXXXXATSALLEGRRRAYLDWCLDHGFEYIEADCTDAAAGGGRREKEGVPRVLEAFQSNMWTNMQYRSGLRP 600
+ LE A A F + + + TKYY+A + FW+Q P+ A S E L +EGI+V FDL + FDE W +RE C R+CVG+KLDLLP GD A G A+ G XXXXXXX L RRR L WCLDHGFEY+EADC D+ GG REKEGVPR++EA QSN+WT+M++ S RP
Sbjct: 61 QVLLEQANAKFDVFPA-SITTKYYNAQISFWRQAQAAVPILALR-------SAEQLEGLEGIIVLFDLRQESGFDEASQWAALMEDREECAFRVCVGSKLDLLPQDPGDGAGFGTGAETTLEPAESGLEGDAAXXXXXXXXXXEGLRERRRRCLGWCLDHGFEYVEADCRDSNTGGELREKEGVPRIVEALQSNVWTDMEFLSSNRP 259
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: D7FHG9_ECTSI (IRC6, uncharacterized protein interacting with AP adaptor complexes n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG9_ECTSI) HSP 1 Score: 143 bits (361), Expect = 6.950e-37 Identity = 80/177 (45.20%), Postives = 98/177 (55.37%), Query Frame = 1
Query: 73 SAPLVFWKQ-DTKPPLAASEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPDAGGDEADGGRDADAKGATAAXXXXXXXXXATSALLEGRRRAYLDWCLDHGFEYIEADCTDAAAGGGRREKEGVPRVLEAFQSNMWTNMQYRSGLRP 600
S + FW+Q P+ A S E L +EGI+V FDL + S DEV W +RE C R+CVG+KLDLLP+ GD G A+ A A L E R R L WCLDHGFEY+EADC D+ GG REKEGVPR++EA QSN+WT M++ S RP
Sbjct: 4 SLTISFWRQAQAAVPVLALR-------SAEQLEGLEGIIVVFDLRQESSLDEVAQWAALVEDREECAFRVCVGSKLDLLPEDPGDGTGFGTGAETAPEPAESGLEGGDAAAAEGLQERRSRC-LGWCLDHGFEYVEADCRDSYTGGELREKEGVPRIVEALQSNVWTGMEFLSSNRP 172
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A835Z725_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z725_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.360e-36 Identity = 82/193 (42.49%), Postives = 106/193 (54.92%), Query Frame = 1
Query: 1 ETTLEAAGALFRQYSSWRLHTKYYSAPLVFWKQDTKPPLAA-SEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPDAGGDEADGGRDADAKGATAAXXXXXXXXXATSALLEGRRRAYLDWCLDHGFEYIEADCTDAAAGGGRREKEGVPRVLEAFQSNMWTNM 576
+ LEAAGA F Q++ W LHTKYYS + FW+Q P ++A E+GA +AA+ E VEGI+ FD++ D+F+ VR WG F ER++ LRL V +K L A +E RR Y+ WCLDHGFEYIEA+C GG REKEGVPRV+EA QS W ++
Sbjct: 21 DVLLEAAGARFAQHA-WPLHTKYYSTQIRFWEQRELPSISAVHEDGAIHAAAGEH--GVEGIIAVFDVTQDDAFESVREWGTFCDERDALALRLLVASKASHL----------------------RKLQMADLFADGDEMERRREVYIHWCLDHGFEYIEANCCRPDLGGDTREKEGVPRVVEALQSTAWASI 188
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: UPI001C276E4B (uncharacterized protein LOC121804817 isoform X1 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C276E4B) HSP 1 Score: 63.2 bits (152), Expect = 1.440e-8 Identity = 51/204 (25.00%), Postives = 87/204 (42.65%), Query Frame = 1
Query: 43 SSWRLHTKYYSAPLVFWKQDTKPPLAASEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPD-------------AGGDEADGGRDADAKGATAAXXXXXXXXXATSALLEGRRRAYLDWCLDHGFEYIEADCTDA------AAGGGRREKEGVPRVLEAFQSNMWTNMQYRSGLR 597
+ W ++TKYY+A + W + L + AS + + +V+ FD SD + ++ W + + + + LCVG K+DLLPD G D G + S G +R+ ++WCL+H EY+EA ++A + G + +G+ R+ A ++MW M +SG R
Sbjct: 47 NGWTINTKYYTADVTVWTANLSNEL--------SIASFPDVNQIVALVMVFDTSDLPTLVALKEW-VSRTDIQKFDILLCVGNKVDLLPDHPSHVEYKRRLMKLGESSVRSNVDFSDYGISETEGSSLLGNEEPSL---GFKRSCIEWCLEHNIEYVEACASNAEFDQCLSVDG---DSQGIDRLYGALSAHMWPGMLLKSGDR 235
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A2G2ZLY6_CAPAN (uncharacterized protein LOC107868252 n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G2ZLY6_CAPAN) HSP 1 Score: 62.0 bits (149), Expect = 7.160e-8 Identity = 57/199 (28.64%), Postives = 89/199 (44.72%), Query Frame = 1
Query: 49 WRLHTKYYSAPLVFWKQDTKPPLAASEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPDAGGDEADGG------RDADAKGATAAXXXXXXXXXATSALLEGR------RRAYLDWCLDHGFEYIEADCTDA------AAGGGRREKEGVPRVLEAFQSNMWTNMQYRSG 591
W ++TKYY+A + W +A E S A A + +V+ FD+SD SF ++ + + + + LC+G K+DLLP G A + AD+ G S+LL +R+YLDWCL+H EY+EA ++A + G + +G R+ A + MW M +SG
Sbjct: 59 WTINTKYYNADVSVW-------MAHLHEDFSIGALP-AYDQLVALVMVFDVSDPSSFAALKDF-VSRTDILKFEILLCIGNKVDLLP---GHSAHVEYRRHLLKSADSSGIPYTELDSGISETEGSSLLGDDDSSLDVKRSYLDWCLEHNIEYVEACASNADFDKCLSVDG---DSQGAERLFGALSAYMWPGMILKSG 242
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: M1BLV4_SOLTU (Uncharacterized protein n=8 Tax=Solanoideae TaxID=424551 RepID=M1BLV4_SOLTU) HSP 1 Score: 60.1 bits (144), Expect = 3.270e-7 Identity = 54/196 (27.55%), Postives = 88/196 (44.90%), Query Frame = 1
Query: 49 WRLHTKYYSAPLVFWKQDTKPPLAASEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPDAGGDEADGGR---DADAKGATAAXXXXXXXXXATSALLEG------RRRAYLDWCLDHGFEYIEADCTDA------AAGGGRREKEGVPRVLEAFQSNMWTNMQYRSG 591
W ++TKYY+A + W +A E S A A + +V+ FD++D SF ++ + + + + LC+G K+DLLP R AD+ G+ S+LL +R+YL+WCL+H EY+EA ++A + G + +G R+ A + MW M +SG
Sbjct: 60 WTINTKYYNADVSVW-------MAHLHEDFSIGALP-AYDQLVALVMVFDVTDLSSFVTLKDF-VSRTDILKFEILLCIGNKVDLLPGHSAHVEYRRRLLKSADSSGSPYTEMDSGISETEGSSLLGDDDDSFDTKRSYLEWCLEHSIEYVEACASNAEFDKCLSVDG---DSQGAERLFGALSAYMWPGMILKSG 243
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A7S2CNU5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CNU5_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.600e-7 Identity = 24/57 (42.11%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 412 LLEGRRRAYLDWCLDHGFEYIEA-DCTDAAAGGGRREKEGVPRVLEAFQSNMWTNMQ 579
L + + Y+ W LD GFE+++ D T G +REKEG PR++EA ++ MW+N+Q
Sbjct: 62 LTDTAHQQYILWALDEGFEFVDTVDMTSCTLGHDKREKEGFPRIVEAAEATMWSNLQ 118
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A7S3H6C6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H6C6_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 5.240e-7 Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 1
Query: 409 ALLEGR----RRAYLDWCLDHGFEYIEADCTDAAAGGGRREKEGVPRVLEAFQSNMWTNMQ 579
AL EG R +Y W L++ FEY+E + D REK G+PR++EA +SNMW+ MQ
Sbjct: 24 ALTEGSEVDLRPSYEAWALENSFEYVEINVLDPVKDFQEREKSGLPRLMEALESNMWSTMQ 84
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A7S2A3A3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3A3_TRICV) HSP 1 Score: 56.6 bits (135), Expect = 1.640e-6 Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 445 WCLDHGFEYIEADCTDAA--AGGGRREKEGVPRVLEAFQSNMWT--NMQYRSG 591
WCLD G+EY+EAD ++ +G REKEG R++EA +S +W+ +MQ R+G
Sbjct: 9 WCLDRGYEYVEADLSEKGIRSGHDEREKEGFARIVEAVESTVWSCASMQPRAG 61
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Match: A0A7J7Q817_9CHLO (Alpha and gamma adaptin binding protein p34-domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q817_9CHLO) HSP 1 Score: 57.8 bits (138), Expect = 1.990e-6 Identity = 53/183 (28.96%), Postives = 75/183 (40.98%), Query Frame = 1
Query: 52 RLHTKYYSAPLVF-----WKQDTKPPLAASEEGASNAASEEALAAVEGIVVTFDLSDKDSFDEVRPWGLFALERESCTLRLCVGTKLDLLPDAGGDEADGGRDADAKGATAAXXXXXXXXXATSALLEGRRRAYLDWCLDHGFEYIEADCTDAAAGGGRR---EKEGVPRVLEAFQSNMWTNM 576
RL TKYY+A ++ +QD + L A A ++ +V+ FD S + SF R W A E +S ++L V K D L + R + A A A S WC+D GFEY+EA A E++GV RVL A Q+++W M
Sbjct: 57 RLDTKYYTADVLVRALGTHQQDKQQQLPAH-----------AWEQLQALVLVFDASSEASFVSARSWA-DARETDSIEVKLLVANKADRL------QQQSTRASSAAAGAAGSCRAPWLHDAVS------------WCVDKGFEYVEAAAGKPAVDAALHLEGEQQGVVRVLAALQAHLWPGM 209 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6725.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6725.3.1 >prot_P-wetherbeei_contig6725.3.1 ID=prot_P-wetherbeei_contig6725.3.1|Name=mRNA_P-wetherbeei_contig6725.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp ETTLEAAGALFRQYSSWRLHTKYYSAPLVFWKQDTKPPLAASEEGASNAAback to top mRNA from alignment at P-wetherbeei_contig6725:2610..3314+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6725.3.1 ID=mRNA_P-wetherbeei_contig6725.3.1|Name=mRNA_P-wetherbeei_contig6725.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig6725:2610..3314+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6725:2610..3314+ >mRNA_P-wetherbeei_contig6725.3.1 ID=mRNA_P-wetherbeei_contig6725.3.1|Name=mRNA_P-wetherbeei_contig6725.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=600bp|location=Sequence derived from alignment at P-wetherbeei_contig6725:2610..3314+ (Phaeothamnion wetherbeei SAG_119_79)back to top |