mRNA_P-wetherbeei_contig6725.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A7S1U3H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H7_9STRA) HSP 1 Score: 119 bits (298), Expect = 9.570e-27 Identity = 75/176 (42.61%), Postives = 104/176 (59.09%), Query Frame = 2
Query: 266 VQKQLEFYFGDSNFRRDRFMKQKA-EEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVLPLPEW 790
V+ Q+EFYFGD+NFRRD+FMK K ++ GFI+I LLTF KL+A+TTD A V A S ++++ DG++ R PL D + RS+ + GFG GN E+T D V FG V + ++RRG +R G+VIVEF+ AAA ++ + + YK L VLP W
Sbjct: 9 VKAQVEFYFGDANFRRDKFMKGKTRDDPDGFISIDTLLTFNKLKALTTDAAKVAEALAESDVVEVGRDGTAFKRKHPLP--TDSQVKDRSVALKGFGEGNEEVTIDSVTDMVKGFGTVGYVQLRRG-----RDRKFQGTVIVEFAEQAAADELLKRKAELKYKDEALV-VLPCKVW 176
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A835Z2D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D4_9STRA) HSP 1 Score: 120 bits (302), Expect = 6.220e-26 Identity = 75/191 (39.27%), Postives = 117/191 (61.26%), Query Frame = 2
Query: 224 KAEDAAPPSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGK-GFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVLPLPEWL 793
KAE A P EL+ +VQ+QLEFYFGDSNF RD+F++++ + + + + L+TF KL++MT D AVV+AAA+ S ++ +SEDG +GR + ++ R+I+ GFG +L+ +FV F FG+V + +RR + ++ GSV+VEF A+A + + R ++VY L KVL E+L
Sbjct: 82 KAETEATP-ELLAKVQRQLEFYFGDSNFNRDKFLREQVKLSEDSLVPLTVLMTFNKLKSMTADEAVVLAAAKQSEVLSVSEDGLRVGRGDGATELR-YDARPRTIYAKGFGYDCPDLSIEFVTDMFKVFGEVGYVYIRR-----TMDKKAKGSVLVEFKEEASALKCLINRGTLVYNGQRLSKVLSYEEYL 265
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A7S0SSA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSA1_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 4.420e-20 Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 2
Query: 266 VQKQLEFYFGDSNFRRDRFMKQKAE-EGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEF-----STAAAAARAVEERES--IVYKSAP 760
++KQ+EFYF DSNFR+D F+K A+ + +GF+ I +LTF KL+ +TTD A V A S+++ L +D + + R+ PL + D S ++++V GF +T D + F+ +GD+ R+RR E + GS +EF AA AA VE +E I YK P
Sbjct: 7 IKKQVEFYFSDSNFRKDTFLKAAADSDPEGFVPISVVLTFNKLRNLTTDEAAVANAIENSNVVTLDDDKTRVRRSNPLPE--DDTSKPKTLYVKGFPVEEPIVTIDEITELFSVYGDIAIVRLRR-----DETKKFKGSCFIEFVDREGMLAAIAAANVEGKEGVQISYKGTP 172
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI0009E5C6B1 (lupus La protein-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5C6B1) HSP 1 Score: 100 bits (249), Expect = 3.020e-19 Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 2
Query: 248 SELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSS--LIQLSEDGSSIGR--TVPLEKAN---DQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKV 772
++L ++ KQ+E+YFGD N RDRF++QKA+E G++T++CL TF +L+A++ D V+ A R S LI++SED + R T PL K + QE+ R+I+ GF + + D + FFA G VT +R+ R GSV VEF++ A +AV +RES+ YK L K+
Sbjct: 15 TDLEKKIIKQIEYYFGDKNLPRDRFLRQKADEDDGWVTLECLGTFNRLKALSEDADVIAKALRKSDSGLIEVSEDNKKVRRVTTKPLPKDSMEARQEAKSRTIYCKGFPK---DTSLDQLEEFFADKGKVTTIIMRK-----DVERIFKGSVFVEFASVDEA-KAVVDRESLKYKEEELIKM 187
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI000C03D601 (lupus La protein homolog n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03D601) HSP 1 Score: 100 bits (249), Expect = 3.710e-19 Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 2
Query: 245 PSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSS--LIQLSEDGSSIGRTV--PL-EKANDQESALRS--IFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVL 775
PS+L ++ KQ+EFYFGD N +DRF++QKAEE G+IT++CL TF +L+A++ D V+ A R S L+++SED I R + PL E + +A +S ++ GF ++ D + FFA +G V + +RR R+ GSV VEFST A +A ES+ Y L K++
Sbjct: 14 PSDLEKKIIKQVEFYFGDKNLPKDRFLRQKAEEDDGWITLECLATFNRLKALSADTDVIANALRKSDAGLVEISEDNKKIRRVLSKPLPENTVEARNAAKSKTVYCKGFPKDSS---LDQLEEFFANYGKVIYIILRR-----DLERSFKGSVFVEFSTVDEA-KAFTLLESVKYNDEELIKMM 188
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI001CF3ED4F (lupus La protein-like n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3ED4F) HSP 1 Score: 99.8 bits (247), Expect = 7.980e-19 Identity = 62/182 (34.07%), Postives = 102/182 (56.04%), Query Frame = 2
Query: 248 SELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAAR--LSSLIQLSEDGSSIGRTVPLEKAND-----QESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKV 772
+++ ++ KQ+EFYFGD N+ +D+F+K KAEE G++T++CL TF +L+++++D V+ A R L+ L+++SED + R D QE+ R+++ GF + T D + FFA G V + ++R E E R GS VEF++ A +A ES+ Y L K+
Sbjct: 16 TDIEKKIIKQVEFYFGDRNYSKDKFLKDKAEEDDGWVTLECLTTFNRLRSLSSDTDVIATALRKSLTGLVEVSEDDKKVRRVKSKPLPEDSVEARQEAKARTVYCKGFPL---DATIDQLEEFFADKGKVVWIAMQRYKKEGEEERLFKGSAFVEFASVDDA-KAFVAMESVKYNEQELIKM 193
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A2B4R776_STYPI (Lupus La protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R776_STYPI) HSP 1 Score: 100 bits (249), Expect = 1.080e-18 Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 2
Query: 245 PSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSS--LIQLSEDGSSIGRTV--PL-EKANDQESALRS--IFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVL 775
PS+L ++ KQ+EFYFGD N +DRF++QKAEE G+IT++CL TF +L+A++ D V+ A R S L+++SED I R + PL E + +A +S ++ GF ++ D + FFA +G V + +RR R+ GSV VEFST A +A ES+ Y L K++
Sbjct: 283 PSDLEKKIIKQVEFYFGDKNLPKDRFLRQKAEEDDGWITLECLATFNRLKALSADTDVIANALRKSDAGLVEISEDNKKIRRVLSKPLPENTVEARNAAKSKTVYCKGFPKDSS---LDQLEEFFANYGKVIYIILRR-----DLERSFKGSVFVEFSTVDEA-KAFTLLESVKYNDEELIKMM 457
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A7S3UYZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYZ4_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 1.580e-18 Identity = 57/172 (33.14%), Postives = 101/172 (58.72%), Query Frame = 2
Query: 263 RVQKQLEFYFGDSNFRRDRFMKQK-AEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRV--RRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEK 769
++ KQ++FYFGDSNFRRD+F+ ++ +++ +G++ + LLTF+KL+A+T DP V A S ++++SE + I R L +D + R+ +V G G N +++ D + + FA FG++ +CR+ + + + R G+ +VEF T +A++ R K EK
Sbjct: 129 KILKQVDFYFGDSNFRRDKFLLERTSQDPEGYLPLSVLLTFQKLKALTEDPLTVAEAVSSSEIVEVSECKTKIKRKNALPSVDDSDK--RTAYVKGLGFDNPDMSVDALKTIFAPFGEIGWCRLIFKNTNDKGEKKRTFVGTALVEFLTLEGMEKAMDARPEYKGKRLSFEK 298
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI000A2A8F7B (lupus La protein n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8F7B) HSP 1 Score: 94.4 bits (233), Expect = 2.790e-18 Identity = 63/178 (35.39%), Postives = 102/178 (57.30%), Query Frame = 2
Query: 263 RVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARL--SSLIQLSEDGSSIGR--TVPLEKAN---DQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVL 775
R+ KQ+E+YFGD NF RD+F++QKAEE G++T+ CL TF +L+AM+ + + A + S L+++S+D + R +VPL + Q + ++++ GF E T D + FF +G+V + +RR + + GSV VEF+T A + + E +S YK L K+L
Sbjct: 25 RIVKQIEYYFGDKNFPRDKFLRQKAEEDDGWVTLDCLQTFSRLKAMSVENQTLADAIKRANSKLLEVSDDDKKVRRLKSVPLPENTVEARQTAKAKTVYCKGFPK---ETTLDQLEEFFGTYGNVVYIMMRRV----YQTKEFKGSVFVEFTTLEEAKKFLAEEKS-TYKDEELIKML 194
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A482RX93_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX93_9ARCH) HSP 1 Score: 96.7 bits (239), Expect = 3.000e-18 Identity = 55/154 (35.71%), Postives = 91/154 (59.09%), Query Frame = 2
Query: 266 VQKQLEFYFGDSNFRRDRFMKQKAE-EGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAV 724
++KQ+EFYF DSN+R+D F+K AE + GF+ I LLTF +L+ +TTD A V A S + LS + + R PL + + ESA R++++ G+ NA++T + + ++ +G V + ++R ++ R GSV VEF++ +AV
Sbjct: 8 IRKQVEFYFSDSNYRKDTFLKAAAESDPDGFVAISVLLTFNRLKNLTTDVAEVAKAVESSDAVVLSANKDKVKRAEPLPETD--ESASRTLYIKGYPVDNADVTIESIAEQWSPYGKVLYVKMRTFRDRDTNARKFKGSVCVEFASTEGVDKAV 159 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6725.1.1 >prot_P-wetherbeei_contig6725.1.1 ID=prot_P-wetherbeei_contig6725.1.1|Name=mRNA_P-wetherbeei_contig6725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=502bp MKCVEEKDKTGEADAGVKRKRDEDDEGVSGAAAAETVEPSKEASKKVKAEback to top mRNA from alignment at P-wetherbeei_contig6725:176..2148- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6725.1.1 ID=mRNA_P-wetherbeei_contig6725.1.1|Name=mRNA_P-wetherbeei_contig6725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1973bp|location=Sequence derived from alignment at P-wetherbeei_contig6725:176..2148- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6725:176..2148- >mRNA_P-wetherbeei_contig6725.1.1 ID=mRNA_P-wetherbeei_contig6725.1.1|Name=mRNA_P-wetherbeei_contig6725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1506bp|location=Sequence derived from alignment at P-wetherbeei_contig6725:176..2148- (Phaeothamnion wetherbeei SAG_119_79)back to top |