prot_P-wetherbeei_contig6707.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6707.1.2
Unique Nameprot_P-wetherbeei_contig6707.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length659
Homology
BLAST of mRNA_P-wetherbeei_contig6707.1.2 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 7.800e-15
Identity = 131/361 (36.29%), Postives = 170/361 (47.09%), Query Frame = 0
Query:   83 PSLRLGEAHDARGWPKLVGVQFVAGSSLSRNSKVRHGEKVTVALEG-GKSAFSQSAAGGALLAAVASGXXXXXXXXXXXXXXXXXXXXXXXXXXSAKGKAPMKQPGAAAAEHALKMVHVRWAAAGGVEGRLPRDVTAFLTPLLQAGHVAVSGRTAGDLSTVSIFTEVPLTLHFEVHRSLFDIDPRDPLRECAYRLLHFARTGVVERPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRKSDAKRAKTAFSAGXXXXXXXXXSVDLAEDDTAEGDEEVAGTDAEAEEEELAKEMTELTALCAEDGAHVAALPAADDPPQ-LRGISLRHYQRQALAWMLSREEPRLITRE 441
            P+ R  EA    GWPKLVG ++V G ++S+ S +++ E+VT+  EG G S+ S   A G       + XXXXXXXXXXXXXXXXXXXXXXXXXX   G+      GA      +  +  R  + G VEGRLPR+V AFL PLLQ G          DL  +  F EVPL L  E+   LF +DP + L   AY LL FA TG +E+                                             K+D ++A+   +     XXXXXX                        EE+L +   + T LC         +P A DP   + G++LR YQRQALAWM+ RE+ R +T E
Sbjct:  155 PAARNKEA----GWPKLVGQRWVTGYTISKGS-MKYREQVTIISEGSGLSSRSSPPAQGKGNKGRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFGRPKASSAGA------MSNILFR-GSTGRVEGRLPREVCAFLAPLLQEGLAKAHAEAVCDLPGLGKFAEVPLMLSIEIEEGLFALDPDEELYRSAYCLLQFAHTGHIEQEQPKSQQAAAAAA-----------------------------EKGKADHQQAERTLAKEERNXXXXXXXXXXX-----------------VREEDLKELYNDETQLC--------EMPEARDPRLFVDGLALRRYQRQALAWMIQREKKRYVTEE 449          
BLAST of mRNA_P-wetherbeei_contig6707.1.2 vs. uniprot
Match: A0A836CF42_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF42_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.360e-12
Identity = 92/242 (38.02%), Postives = 114/242 (47.11%), Query Frame = 0
Query:  194 ALKMVHVRWAAAGGVEGRLPRDVTAFLTPLLQAGHVAVSGRTAGDLSTVSIFTEVPLTLHFEVHRSLFDIDP-RDP-LRECAYRLLHFARTGVVERPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRKSDAKRAKTAFSAGXXXXXXXXXSVDLAEDDTAEGDEEVAGTDAEAEEEELAKEMTELTALCAEDGAHVAALPAADDPPQLRGISLRHYQRQALAWMLSRE 433
            A    H+R+   GG EGRLP D+   L PLL+AG + ++ R A  +++ + F+ VPL L   V   LF  D  R P L   A++LL F  TG V+                            XXXXXXXXXXXXXXX      A RA  A S                      GDE  AG D    + + A+  + L+ +         ALP A DPPQLRG+SLR YQRQALAWML RE
Sbjct:  223 AAAFAHIRFTTRGGAEGRLPGDLCGALAPLLEAGLMEIAARCALPVASTAHFSRVPLLLRVAVRPGLFAFDAARAPRLSAAAFQLLLFGATGEVD-------------------PGALPPPEAXXXXXXXXXXXXXXXXXXXXKALRAAAAHS----------------------GDE--AGADGAEAKVDAAQVESLLSTM------EPRALPEAPDPPQLRGLSLRRYQRQALAWMLERE 415          
BLAST of mRNA_P-wetherbeei_contig6707.1.2 vs. uniprot
Match: D7FJC4_ECTSI (DNA repair helicase rad5,16, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJC4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 7.390e-12
Identity = 77/237 (32.49%), Postives = 101/237 (42.62%), Query Frame = 0
Query:  206 GGVEGRLPRDVTAFLTPLLQAGHVAVSGRTAGDLSTVSIFTEVPLTLHFEVHRSLFDIDPRDPLRECAYRLLHFARTGVVERPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRKSDAKRAKTAFSAGXXXXXXXXXSVDLAEDDTAEGDEEVAGTDAEAEEEELAKEMTELTALCAEDGAHVAALPAADDPPQ-LRGISLRHYQRQALAWMLSREEPRLITRE 441
            G VEGRLPR+V AFL PLLQ G V        DL  +  F EVPL L  E+   LF ++P + L   AY LL FA TG +E+                                            +  D ++A+   +  XXXXXXXXX                        EE++ +   + T LC         +P A DP   + G++LR YQRQALAWM+ RE+ R +T E
Sbjct:   11 GRVEGRLPREVCAFLAPLLQEGLVKAHAEAVCDLPGLGKFAEVPLMLSIEIEEGLFALEPEEELYRNAYCLLQFAHTGHIEQEQPKSQQAVAAAAE----------------------------KGKADDHQQAEKTLAKXXXXXXXXXXXXXXX-----------------VREEDVKELYDDETQLC--------EMPEARDPRLFVDGLALRRYQRQALAWMIQREKKRYVTEE 194          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6707.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KHD4_9PHAE7.800e-1536.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CF42_9STRA3.360e-1238.02SNF2 family N-terminal domain-containing protein n... [more]
D7FJC4_ECTSI7.390e-1232.49DNA repair helicase rad5,16, putative n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 376..396
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..498
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..347

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6707contigP-wetherbeei_contig6707:324..2483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6707.1.2mRNA_P-wetherbeei_contig6707.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6707 133..2616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6707.1.2 ID=prot_P-wetherbeei_contig6707.1.2|Name=mRNA_P-wetherbeei_contig6707.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=659bp
MARDDAIQALSAMGVGRNDDDRKRLLAGAGDDVGIAANHWFDGGEASVLP
AEEVEEVEEVDVVDAPAAADAAASTPRTPIPPPSLRLGEAHDARGWPKLV
GVQFVAGSSLSRNSKVRHGEKVTVALEGGKSAFSQSAAGGALLAAVASGS
GGRGKGKAGAAAMPAKAKGGGANGGSAKGKAPMKQPGAAAAEHALKMVHV
RWAAAGGVEGRLPRDVTAFLTPLLQAGHVAVSGRTAGDLSTVSIFTEVPL
TLHFEVHRSLFDIDPRDPLRECAYRLLHFARTGVVERPPPAAAANGETDG
ASGSAANKGAKPAAGGGGGGGGSSAGGPSSSRKSDAKRAKTAFSAGADDA
DDADDSVDLAEDDTAEGDEEVAGTDAEAEEEELAKEMTELTALCAEDGAH
VAALPAADDPPQLRGISLRHYQRQALAWMLSREEPRLITREAARARLGLA
LERGSSCAVGDGSGGVGNGEGGCSSNGGSSSGGGGGSSGGSDQESAKDGS
GSDAAAAGKVSSAAPQGVVVVTPLVAADAAAEGADGHAGPMHPLWERYVA
GLDSAAGSTNGGGAAGSSSGDGGATSDVAGAEGFLGAASSASPGPKDRAA
PFKYYMNSFSRRYGTRFPSAVESCRGGILADEVSLCVYVLCLQAGKYPGW
FLKNFTDV*
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