mRNA_P-wetherbeei_contig6703.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: D7G5C1_ECTSI (Sulfhydryl oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C1_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 1.170e-12 Identity = 51/137 (37.23%), Postives = 60/137 (43.80%), Query Frame = 2
Query: 83 RCAECRRHFLTMYDNCDNGRCSITARDADSRNA---------ALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPHRYAWPRQSHCPGCWLGVTD-YGRPIWDEEEVYKHLKKSYSC 463
RC CR HF+ MY CDNGRC I + A+ R ALW+WRAHN VN RLA G+ V G D R WP C CW G +P W E EV K LK+++SC
Sbjct: 289 RCEVCRSHFMEMYSTCDNGRCDIP-KPANVRGQHTSQGEPALALWVWRAHNTVNGRLALE----------GDEEV---------------GPYD--RGLWPSAKACKQCWSGFPQGKDKPSWSETEVLKLLKRTFSC 397
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A7S2BQV2_9STRA (Sulfhydryl oxidase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQV2_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 3.200e-8 Identity = 45/141 (31.91%), Postives = 61/141 (43.26%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSIT-ARDADSRNAA-LWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPHRYAWPRQSHCPGCW-----------LGVTDYGRPI-WDEEEVYKHLKKSYSCS 466
C+ CR HFL M+D C RCSI +S+ AA LWLW+AHN VN R+A + +A+ R WP + CPGCW L + + W+E+EV L+ +YS S
Sbjct: 183 CSHCRDHFLEMFDGCLFDRCSIPDGNSPESQKAAVLWLWKAHNTVNVRVAEESYDDTQVKKS-SASQRAWMAL------------------WPSRRLCPGCWPPNSTLIDNPHLTALEAVEAVRWNEDEVVVFLRDAYSSS 304
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: UPI0005F0C3E0 (sulfhydryl oxidase 1 n=1 Tax=Wasmannia auropunctata TaxID=64793 RepID=UPI0005F0C3E0) HSP 1 Score: 65.9 bits (159), Expect = 8.510e-8 Identity = 45/129 (34.88%), Postives = 55/129 (42.64%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNAALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADP-HR-YAWPRQSHCPGCWLGVTDYGRPIWDEEEVYKHLKKSYSCS 466
CA+C HF+ M D NG + +RD AALWLWRAHN VNARL+ DP HR +P HCP C + W+EEEV ++LK YS S
Sbjct: 489 CADCAAHFVEMADR--NGMFDVRSRDE----AALWLWRAHNQVNARLSGDN------------------------------TEDPEHRKIQYPAAEHCPAC-----RHANDSWNEEEVLRYLKIKYSYS 576
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A8J2SH76_9STRA (Sulfhydryl oxidase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SH76_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.670e-7 Identity = 51/143 (35.66%), Postives = 62/143 (43.36%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNAALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPHRYAWPRQSHCPGCWLGVTDYGRPIWDEEEVYKHLKKSY-SCSTAADAAAAGSAGRSR 511
C ECR HFL MYD+C GRC DAD+ +A+LWLWRAHN VNAR T + A +A+P C C G WD + V LK+ Y + S+ A AAA G SR
Sbjct: 323 CEECRDHFLEMYDSCRYGRC-----DADA-DASLWLWRAHNVVNARTHGHVEDGYITANTPDNAAAF--------------------WAFPSVEQCADCRDGKK------WDLDGVRAFLKREYGNGSSPAPLAAAPPPGSSR 433
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A5C7HKH9_9ROSI (Sulfhydryl oxidase n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HKH9_9ROSI) HSP 1 Score: 63.9 bits (154), Expect = 3.180e-7 Identity = 42/130 (32.31%), Postives = 58/130 (44.62%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNAALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPH--RYAWPRQSHCPGCWLGV----TDYGRPIWDEEEVYKHLKKSY 457
C ECR+HF Y+ C S+T+ + +R+ ALWLWRAHNNVN RL A+++ ADP + WP C C+ T + + WDE+EV+K L Y
Sbjct: 407 CEECRQHF---YEMCS----SVTSSFSKTRDFALWLWRAHNNVNERLMKE-----------EASLK---------------TADPKFPKIIWPPAQLCSSCYRSQSKADTKFSQIDWDEDEVFKFLSSYY 503
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A7S2WSV1_9STRA (Sulfhydryl oxidase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSV1_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 3.310e-7 Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSI-TARDADSRNA-ALWLWRAHNNVNARLA 229
C+ CR+HFL M+D C GRC I R +S+ A ALWLWRAHN VN+R+A
Sbjct: 345 CSHCRQHFLQMFDECWGGRCDIGDDRSEESQRALALWLWRAHNTVNSRVA 394
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A7S1C2N5_9STRA (Sulfhydryl oxidase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2N5_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.490e-6 Identity = 38/127 (29.92%), Postives = 49/127 (38.58%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNA---ALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPHRYAWPRQSHCPGCWLGVTDYGRPIWDEEEVYKHLKKSY 457
C CR HF MYD+C+ CS T D +A A+WLW AHN+VNARL T + WP + C CW + +DE VYK L + +
Sbjct: 427 CKVCRDHFTKMYDSCELDNCSFTKGYPDDDSATDVAMWLWTAHNSVNARLIKERAEREKREAT---------------------PEEIDFSHWPMEKDCSICWYDNS------FDETMVYKFLTRRF 526
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A7S1C2B8_9STRA (Sulfhydryl oxidase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2B8_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 5.490e-6 Identity = 38/127 (29.92%), Postives = 49/127 (38.58%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNA---ALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPHRYAWPRQSHCPGCWLGVTDYGRPIWDEEEVYKHLKKSY 457
C CR HF MYD+C+ CS T D +A A+WLW AHN+VNARL T + WP + C CW + +DE VYK L + +
Sbjct: 427 CKVCRDHFTKMYDSCELDNCSFTKGYPDDDSATDVAMWLWTAHNSVNARLIKERAEREKREAT---------------------PEEIDFSHWPMEKDCSICWYDNS------FDETMVYKFLTRRF 526
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A175YGZ5_DAUCS (Sulfhydryl oxidase n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A175YGZ5_DAUCS) HSP 1 Score: 59.3 bits (142), Expect = 8.540e-6 Identity = 41/129 (31.78%), Postives = 54/129 (41.86%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNAALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPH--RYAWPRQSHCPGCWLGV--TDYGRPI-WDEEEVYKHLKKSY 457
C ECR+HF Y+ C S++ +R+ ALWLW AHNNVN+RL G DP + WP + CP C+L +D I WD+ EV+K L Y
Sbjct: 344 CEECRQHF---YEMCS----SVSNPFNSTRDYALWLWTAHNNVNSRLMKEEASQ--------------------------GTGDPKFPKMMWPPKQLCPSCYLQSPQSDAENQIDWDQNEVFKFLASYY 439
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Match: A0A383VB39_TETOB (Sulfhydryl oxidase n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VB39_TETOB) HSP 1 Score: 58.9 bits (141), Expect = 1.260e-5 Identity = 46/145 (31.72%), Postives = 58/145 (40.00%), Query Frame = 2
Query: 86 CAECRRHFLTMYDNCDNGRCSITARDADSRNAALWLWRAHNNVNARLAAXXXXXXXXXXTGNAAVRXXXXXXXXXXXXXGGAADPHRYAWPRQSHCPGCWL----------GVTDYGRPI-----------WDEEEVYKHLKKSY 457
C C+RH+ + D+ + D R A LWLWRAHN VN RLA G+++ G AA P + WP +S CP C L G D GR W+EEEVY+ L K Y
Sbjct: 359 CEVCKRHYERVSDSAE------AKAVKDRRGAVLWLWRAHNEVNGRLAKIEAKY------GHSST--------------GDAAFP-KVQWPTKSACPQCRLPTLEKKADERGGADGGRRTGEALAQSDDVQWNEEEVYRFLMKWY 476 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6703.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6703.1.1 >prot_P-wetherbeei_contig6703.1.1 ID=prot_P-wetherbeei_contig6703.1.1|Name=mRNA_P-wetherbeei_contig6703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=406bp MGRPRSRCAECRRHFLTMYDNCDNGRCSITARDADSRNAALWLWRAHNNVback to top mRNA from alignment at P-wetherbeei_contig6703:106..1735- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6703.1.1 ID=mRNA_P-wetherbeei_contig6703.1.1|Name=mRNA_P-wetherbeei_contig6703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1630bp|location=Sequence derived from alignment at P-wetherbeei_contig6703:106..1735- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6703:106..1735- >mRNA_P-wetherbeei_contig6703.1.1 ID=mRNA_P-wetherbeei_contig6703.1.1|Name=mRNA_P-wetherbeei_contig6703.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1218bp|location=Sequence derived from alignment at P-wetherbeei_contig6703:106..1735- (Phaeothamnion wetherbeei SAG_119_79)back to top |