prot_P-wetherbeei_contig67.5.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig67.5.1
Unique Nameprot_P-wetherbeei_contig67.5.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length67
Homology
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: D7FRM9_ECTSI (40S ribosomal protein S28 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM9_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.590e-38
Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    2 ENQGIKLAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            +NQGIKLAKVN+VLGRTGNTGNVTQVRVEFLDDP+RSIIRNVKGPVREGDILCLLEWEREARRLR
Sbjct:    2 DNQGIKLAKVNKVLGRTGNTGNVTQVRVEFLDDPTRSIIRNVKGPVREGDILCLLEWEREARRLR 66          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: F0XVZ1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVZ1_AURAN)

HSP 1 Score: 123 bits (309), Expect = 1.020e-35
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0
Query:    6 IKLAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            IKLAK+NRVLGRTGNTGNVTQVRVEF+DDP+RSIIRNVKGPVREGDILCLLEWEREARRLR
Sbjct:    6 IKLAKINRVLGRTGNTGNVTQVRVEFIDDPNRSIIRNVKGPVREGDILCLLEWEREARRLR 66          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: A0A836CPG2_9STRA (40S ribosomal protein S28 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG2_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.750e-33
Identity = 55/61 (90.16%), Postives = 60/61 (98.36%), Query Frame = 0
Query:    6 IKLAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            +KLAKV+RVLGRTGNTGNVTQVRV+F+DD SR+IIRNVKGPVREGDILCLLEWEREARRLR
Sbjct:    5 VKLAKVSRVLGRTGNTGNVTQVRVDFMDDSSRTIIRNVKGPVREGDILCLLEWEREARRLR 65          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: B7GCW6_PHATC (Predicted protein n=4 Tax=Naviculales TaxID=38748 RepID=B7GCW6_PHATC)

HSP 1 Score: 112 bits (281), Expect = 1.970e-31
Identity = 56/65 (86.15%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    4 QGIKLAKVNRVLGRTGNTGNVTQVRVEFLD--DPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            Q +KLAKVNRVLGRTGNTGNVTQVRVEF+D     RSI+RNVKGPVREGDILCLLEWEREARRLR
Sbjct:    3 QPVKLAKVNRVLGRTGNTGNVTQVRVEFMDAEGAGRSIVRNVKGPVREGDILCLLEWEREARRLR 67          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: A0A7S0CCP2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP2_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.140e-30
Identity = 56/69 (81.16%), Postives = 61/69 (88.41%), Query Frame = 0
Query:    4 QGIKLAKVNRVLGRTGNTGNVTQVRVEFLDDPS------RSIIRNVKGPVREGDILCLLEWEREARRLR 66
            Q +KLAKV+RVLGRTGNTGNVTQVRVEF+DD +      RSI+RNVKGPVREGDILCLLEWEREARRLR
Sbjct:   36 QPVKLAKVSRVLGRTGNTGNVTQVRVEFMDDGNAGGQAGRSIVRNVKGPVREGDILCLLEWEREARRLR 104          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: A0A4D9CYK0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYK0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 9.160e-30
Identity = 51/65 (78.46%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    2 ENQGIKLAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            ++Q +KL KV  V  RTG+TGNVTQVRVEFLDDP+RSI RNVKGPVREGD+LCLLEWER+ARRLR
Sbjct:    2 DSQQVKLVKVKSVEARTGSTGNVTQVRVEFLDDPTRSIRRNVKGPVREGDVLCLLEWERDARRLR 66          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: K0SWS9_THAOC (Uncharacterized protein (Fragment) n=2 Tax=Thalassiosira TaxID=35127 RepID=K0SWS9_THAOC)

HSP 1 Score: 112 bits (280), Expect = 1.050e-29
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    2 ENQGIKLAKVNRVLGRTGNTGNVTQVRVEFLDDPS-----RSIIRNVKGPVREGDILCLLEWEREARRLR 66
            ++Q +KLAKVNRVLGRTGNTGNVTQVRVEF+D  +     RSI+RNVKGPVREGDILCLLEWEREARRLR
Sbjct:  127 QDQPVKLAKVNRVLGRTGNTGNVTQVRVEFMDADAGTGTGRSIVRNVKGPVREGDILCLLEWEREARRLR 196          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: K3WAC4_GLOUD (Uncharacterized protein n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WAC4_GLOUD)

HSP 1 Score: 108 bits (269), Expect = 1.340e-29
Identity = 53/59 (89.83%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    8 LAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            LAKV  VLGRTGNTGNVTQVRVEFL D  R IIRNVKGPVREGDILCLLEWEREARRLR
Sbjct:    9 LAKVVNVLGRTGNTGNVTQVRVEFLQDDKRKIIRNVKGPVREGDILCLLEWEREARRLR 67          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: A0A2R5G0Q3_9STRA (40S ribosomal protein S28 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G0Q3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 6.240e-29
Identity = 52/63 (82.54%), Postives = 55/63 (87.30%), Query Frame = 0
Query:    4 QGIKLAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREGDILCLLEWEREARRLR 66
            Q + LA+V RVL RTG TGNVTQVRVEFLDD  RSIIRNVKGPVREGD+L LLEWEREARRLR
Sbjct:   10 QAVMLARVTRVLSRTGATGNVTQVRVEFLDDDPRSIIRNVKGPVREGDVLTLLEWEREARRLR 72          
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Match: A0A1E7FGX9_9STRA (Ribosomal protein S28e (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGX9_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.110e-28
Identity = 53/65 (81.54%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    7 KLAKVNRVLGRTGNTGNVTQVRVEFLDDPS-----RSIIRNVKGPVREGDILCLLEWEREARRLR 66
            KLAKV++VLGRTGNTGNVTQVRVEF+D  S     RSI+RNVKGPVRE DILCLLEWEREARRLR
Sbjct:    1 KLAKVSKVLGRTGNTGNVTQVRVEFMDAESGAGSGRSIVRNVKGPVRENDILCLLEWEREARRLR 65          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig67.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRM9_ECTSI2.590e-3895.3840S ribosomal protein S28 n=2 Tax=Ectocarpus TaxID... [more]
F0XVZ1_AURAN1.020e-3595.08Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A836CPG2_9STRA2.750e-3390.1640S ribosomal protein S28 n=1 Tax=Tribonema minus ... [more]
B7GCW6_PHATC1.970e-3186.15Predicted protein n=4 Tax=Naviculales TaxID=38748 ... [more]
A0A7S0CCP2_9STRA1.140e-3081.16Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A4D9CYK0_9STRA9.160e-3078.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K0SWS9_THAOC1.050e-2980.00Uncharacterized protein (Fragment) n=2 Tax=Thalass... [more]
K3WAC4_GLOUD1.340e-2989.83Uncharacterized protein n=3 Tax=Pythiaceae TaxID=4... [more]
A0A2R5G0Q3_9STRA6.240e-2982.5440S ribosomal protein S28 n=1 Tax=Hondaea fermenta... [more]
A0A1E7FGX9_9STRA2.110e-2881.54Ribosomal protein S28e (Fragment) n=1 Tax=Fragilar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000289Ribosomal protein S28ePFAMPF01200Ribosomal_S28ecoord: 5..65
e-value: 6.0E-30
score: 103.0
IPR000289Ribosomal protein S28ePANTHERPTHR1076940S RIBOSOMAL PROTEIN S28coord: 4..66
IPR000289Ribosomal protein S28eCDDcd04457S1_S28Ecoord: 7..66
e-value: 3.74397E-29
score: 96.1651
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 1..66
e-value: 3.2E-36
score: 125.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 4..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig67contigP-wetherbeei_contig67:9596..9796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig67.5.1mRNA_P-wetherbeei_contig67.5.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig67 9596..9796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig67.5.1 ID=prot_P-wetherbeei_contig67.5.1|Name=mRNA_P-wetherbeei_contig67.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=67bp
QENQGIKLAKVNRVLGRTGNTGNVTQVRVEFLDDPSRSIIRNVKGPVREG
DILCLLEWEREARRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000289Ribosomal_S28e
IPR012340NA-bd_OB-fold