mRNA_P-wetherbeei_contig67.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: UPI001884F512 (membrane-bound transcription factor site-2 protease-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884F512) HSP 1 Score: 103 bits (257), Expect = 8.850e-20 Identity = 128/493 (25.96%), Postives = 185/493 (37.53%), Query Frame = 1
Query: 4 LDRLGLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNA-WAAVLSTAGGQGGSGF----------VVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHV-EDLLRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYD-GLFYATGHGVVITGVQPWSPLADAINPGAVVVRANGMHVGNALDLAAAIESAVRPATNEVFEHGASTITAAPEELWLSRGFCMDAGEATLLAERDDH-------GDNCCDSILHGGGYAEAGGRRCFVAWPQRSADNGANDVAVVPLGAATDAGAGYGRLASGMDNQAAVCLPAHGVAATSRAHCDSSNVCGRDGVCWRPLGEFDEVLLTVQLGDRRIVLFEGQPRTMLSALRTSDAQLRGAAAAPAMLRWGALAAETARDFWWLLLQASASLAIANAVPCALLDGGAICHQVLRLG 1422
L+ G+ P + W TR+LN GS R R +A G + S++ L++ + W A + V+P V +P P + ++V HE+GHA+AAV +RV+ G+ + I P FV V + L P +L V AGVWHN++LC V L AAP Y G+++ V+P SPL A G+ G DL ++ + A A P G+C+ + E DH G C + +G + CF Q AD D P CLPA V + C ++ C + C +P E LL ++ R VLF G P R S + R A + ++ L ET + +L SA+LA+ NAVPC LDG I +L G
Sbjct: 36 LESSGISIKPLQIKWSTRMLNRSFQRWGSA--PGRLTRLWFACGVWITCALLLPSMLLLIYTIYRLLWPAAPAAXXXXXXXXXATRPAFILEPVLPGVNLPADDVPYYLVTLLVCSVCHEIGHAVAAVREHVRVFGSGLLLVLIVPAAFVDVCSESLAALPPGRRLRVLCAGVWHNVVLCAVAALVLA--AAPLALAPLYFVNDGIIVYHVEPGSPLHGA----------TGLSAG---DLVTGVDDCAVTTRRDWLSCLARQAAAPPA------GYCVPSDITATYDETIDHPFQREETGTMECCAASNGSSHL------CF----QFIADESRPDRGAPPFS----------------------CLPARAVVDAAPMRCATTAACAEEHFCLQPALENGTRLLALRRRGARAVLFLGVPAAAFRDTRVSGYRPRSALFSASL----PLRLETLARY---VLSFSAALAVLNAVPCRALDGQWIWEALLEAG 466
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A3Q2Y7E3_HIPCM (Membrane-bound transcription factor site-2 protease n=6 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2Y7E3_HIPCM) HSP 1 Score: 99.8 bits (247), Expect = 1.920e-18 Identity = 73/208 (35.10%), Postives = 107/208 (51.44%), Query Frame = 1
Query: 4 LDRLGLRWGPFHVAWETRLLN------ARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
L R GL PFHV W+T + N AR+H RAL +++G V ASVV L+ L A + + G Q VVP V +P + F+ A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SP QL ++ AGVWHN +LCV+ LA + FY++G G ++T V
Sbjct: 38 LARRGLMLSPFHVRWQTTIFNRLFAYCARIHP--------RALYLWFSSGLVFGVVAMLASVVLLVKTLQQTLAQMTTDNPRIGAQQALQVVVPGVNLPTSHLAYFFLALLLSGVIHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNIVSPAQQLRIFCAGVWHNFMLCVLA-LAFLFLLPLFLLPFYSSGAGALVTEV 236
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: UPI00147229EE (membrane-bound transcription factor site-2 protease-like isoform X2 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI00147229EE) HSP 1 Score: 99.0 bits (245), Expect = 2.230e-18 Identity = 72/198 (36.36%), Postives = 107/198 (54.04%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
GL PFHV W+T + N RL A ++ + AL + +G V ASVV L+ L A + + GGQ VVP V +P ++ F+ A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SPT QL ++ AGVWHN +LC+ LA + FY+TG G ++T V
Sbjct: 42 GLMLAPFHVRWQTTMFN-RLFAYCARIKPG-ALYLWFNSGLVFGVVAMLASVVLLMKTLQQTLAQMTTDNPRIGGQQALQVVVPGVNLPVSQLGYFFIALLLSGVIHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFILCLAA-LAILFLLPVFLFPFYSTGAGALVTEV 236
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A672GPL1_SALFA (Membrane-bound transcription factor site-2 protease n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672GPL1_SALFA) HSP 1 Score: 99.4 bits (246), Expect = 2.660e-18 Identity = 72/198 (36.36%), Postives = 108/198 (54.55%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
GL PFHV W+T + N RL A + R + RAL +++G V SV+ L+ L +A + + GGQ VVP +P ++ F+ A++++ VHE+GHA+AA+ +RV G+FV ++PG FV + L SPT QL ++ AGVWHN +LC+V LA + Y+TG G ++T V
Sbjct: 40 GLMLSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFSSGLVFGVAAMLGSVLLLIRTLQQTYAQMTTDNPRIGGQQALQVVVPGFNLPTSQLAYFFIALLLSGLVHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFILCLVA-LAFLFLLPVFLFPAYSTGGGALVTEV 234
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A1A8UEQ6_NOTFU (Membrane-bound transcription factor site-2 protease n=20 Tax=Percomorphaceae TaxID=1489872 RepID=A0A1A8UEQ6_NOTFU) HSP 1 Score: 98.6 bits (244), Expect = 4.780e-18 Identity = 74/198 (37.37%), Postives = 107/198 (54.04%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
GL PFHV W+T + N RL A + R + RAL + +G V SVV L+ L +A + ++ GGQ VVP V +P ++ F+ A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SPT QL ++ AGVWHNL+LCV LA Y TG G ++T V
Sbjct: 42 GLMVSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFNSGLVFGVAAMVGSVVLLIKTLQQTYAQMTTSNPRIGGQQVLQVVVPGVNLPTSQLAYFFIALLLSGVIHELGHAVAALREQVRVNGFGMFVFVLYPGAFVDLFTTHLNLVSPTQQLRIFCAGVWHNLVLCVAA-LAFLFLLPVLLFPAYTTGAGALVTEV 236
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A0S7LKY0_9TELE (Membrane-bound transcription factor site-2 protease (Fragment) n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LKY0_9TELE) HSP 1 Score: 94.7 bits (234), Expect = 5.110e-18 Identity = 64/169 (37.87%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCV 510
GL PFHV W+T + N RL A + R + RAL +++G V SVV L+ L +A + + GGQ VVP V +P ++ F+ A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SP QL ++ AGVWHN +LCV
Sbjct: 71 GLMLSPFHVRWQTTMFN-RLFAYCA-RINARALYLWFSSGLVFGVAAMLGSVVLLVKTLQQTYAQMTTDNPRIGGQQTLQVVVPGVNLPTSQLAYFFIALLLSGVIHELGHAVAALRESVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPAQQLRIFCAGVWHNFVLCV 237
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A087XD04_POEFO (Membrane bound transcription factor peptidase, site 2 n=1 Tax=Poecilia formosa TaxID=48698 RepID=A0A087XD04_POEFO) HSP 1 Score: 99.8 bits (247), Expect = 5.920e-18 Identity = 74/198 (37.37%), Postives = 107/198 (54.04%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
GL PFHV W+T + N RL A + R + RAL +++G V SVV L+ L +A + + GGQ VVP V +P ++ F+ A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SP QL ++ AGVWHN +LCVV LA YATG G ++T V
Sbjct: 42 GLMLSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFSSGLVFGVAAMLGSVVLLVKTLQQTYAQMTTDNPRIGGQQTLQVVVPGVNLPTSQLAYFFIALLLSGVIHELGHAVAALRESVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPAQQLRIFCAGVWHNFVLCVVA-LALLFLLPVLLFPVYATGVGAMVTEV 236
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: M3ZN92_XIPMA (Membrane-bound transcription factor site-2 protease n=6 Tax=Poeciliinae TaxID=586240 RepID=M3ZN92_XIPMA) HSP 1 Score: 98.2 bits (243), Expect = 6.290e-18 Identity = 73/198 (36.87%), Postives = 106/198 (53.54%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
GL PFHV W+T + N RL A + R + RAL +++G V SVV L+ L +A + + GGQ VVP V +P ++ F+ A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SP QL ++ AGVWHN +LCV LA YATG G ++T V
Sbjct: 42 GLMLSPFHVRWQTTMFN-RLFAYCA-RINPRALYLWFSSGLVFGVAAMLGSVVLLVKTLQQTYAQMTTDNPRIGGQQTLQVVVPGVNLPTSQLAYFFIALLLSGIIHELGHAVAALRESVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPAQQLRIFCAGVWHNFVLCVAA-LALLFLLPVLLFPVYATGVGAMVTEV 236
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: UPI0011C15126 (membrane-bound transcription factor site-2 protease-like n=1 Tax=Sparus aurata TaxID=8175 RepID=UPI0011C15126) HSP 1 Score: 93.6 bits (231), Expect = 8.310e-18 Identity = 72/198 (36.36%), Postives = 105/198 (53.03%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGV 597
GL PFH+ W+T + N RL A + R + RAL + +G V SVV L+ L A + + GGQ VVP V +P ++ F++A++++ +HE+GHA+AA+ +RV G+FV ++PG FV + L SPT QL ++ AGVWHN +LCV LA Y TG G ++T V
Sbjct: 42 GLMLSPFHLRWQTTMFN-RLFAYCA-RINPRALYLWFNSGLVFGIVAMLGSVVLLVKTLQQTLAQMTTDNPRMGGQQTLQVVVPGVNLPTSQLVYFFSALLLSGVIHELGHAVAALREQVRVNGFGMFVFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFVLCVAA-LAFLFLLPILLFPVYYTGAGALVTEV 236
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Match: A0A3B3ZM65_9GOBI (Membrane-bound transcription factor site-2 protease n=2 Tax=Oxudercinae TaxID=497678 RepID=A0A3B3ZM65_9GOBI) HSP 1 Score: 97.4 bits (241), Expect = 1.130e-17 Identity = 71/202 (35.15%), Postives = 105/202 (51.98%), Query Frame = 1
Query: 16 GLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTFTSAASVVFLLHNLSNAWAAVLST---AGGQGGSGFVVPPVAVPPARAPCFWAAVIVAFSVHEVGHALAAVANGLRVYSVGVFVTAIFPGTFVHVEDL-LRFSSPTVQLHVYAAGVWHNLLLCVVCWLAERHWAAPYDGLFYATGHGVVITGVQPWS 609
GL PFHV W+T + N RL A ++ R R AL + +G V + SV+ L+ L A + + GGQ VVP V +P + F+ A++++ +HE+GHA+AA+ +RV G+F+ ++PG FV + L SPT QL ++ AGVWHN +LCV L + Y TG G ++T V S
Sbjct: 42 GLMLSPFHVRWQTTMFN-RLFAYCARIRPR-ALYLWFNSGLVFGVVSMVGSVILLVKTLQQTVAQMTTDNPRIGGQQTLQVVVPGVNLPTNQLAYFFIALLLSGVIHELGHAVAALREQVRVNGFGMFIFVVYPGAFVDLFTTHLNLISPTQQLRIFCAGVWHNFMLCVAA-LTFLFLLPVFLFPMYTTGAGALVTDVMQGS 240 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig67.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig67.3.1 >prot_P-wetherbeei_contig67.3.1 ID=prot_P-wetherbeei_contig67.3.1|Name=mRNA_P-wetherbeei_contig67.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=543bp ALDRLGLRWGPFHVAWETRLLNARLHALGSKRRSRRALRSLYAAGAVVVTback to top mRNA from alignment at P-wetherbeei_contig67:6777..8870- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig67.3.1 ID=mRNA_P-wetherbeei_contig67.3.1|Name=mRNA_P-wetherbeei_contig67.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2094bp|location=Sequence derived from alignment at P-wetherbeei_contig67:6777..8870- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig67:6777..8870- >mRNA_P-wetherbeei_contig67.3.1 ID=mRNA_P-wetherbeei_contig67.3.1|Name=mRNA_P-wetherbeei_contig67.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1629bp|location=Sequence derived from alignment at P-wetherbeei_contig67:6777..8870- (Phaeothamnion wetherbeei SAG_119_79)back to top |