mRNA_P-wetherbeei_contig6698.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A7S2MG38_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MG38_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.380e-33 Identity = 72/138 (52.17%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 1642 IEFRFYLGFDKGDPMYDTGDAWSDMRRAFDRRGAAAXXXXXXXXXXXRIKLK------LMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAFV 2037
IEF FYLGFD+GDP+YDTGDAW ++RR F + A LK LM FD +G+PSQ+V LA A DG +Y+FQ NDDT+IV+ WA +F L SN +HPNLGVTGP D N ILTHAFV
Sbjct: 52 IEFSFYLGFDRGDPLYDTGDAWGEIRRTFGKNTRRALTWLNTPNATQAKVLKQGLILHLMDFDLPKGSPSQVVVGLANAAYKDGIDYMFQVNDDTVIVSHDWAKSFIRALESNTIHPNLGVTGPVDTNNDRILTHAFV 189
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A7S0SZW8_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZW8_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.170e-28 Identity = 63/139 (45.32%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 1639 RIEFRFYLGFDKGDPMYDTGDAWSDMRRAFDRRGAAAXXXXXXXXXXXR------IKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAFV 2037
R +RFYLGFD+GD +YD GD+W ++R F R + + +KL+ FD LQGAP+Q+VS+L A +D +Y +Q NDDT+IVT W LASNP PN GVTGP D N ILTH+FV
Sbjct: 306 RYIYRFYLGFDRGDNLYDVGDSWQNIREEFSHRAIYRMTEQMLDENEIKNVLDKQLSIKLLDFDHLQGAPTQVVSQLVLTAYVDNFDYFYQVNDDTMIVTPNWVPKLVEKLASNPSIPNFGVTGPTDTNNEKILTHSFV 444
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: D8LNG2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG2_ECTSI) HSP 1 Score: 122 bits (307), Expect = 1.490e-25 Identity = 109/385 (28.31%), Postives = 160/385 (41.56%), Query Frame = 3
Query: 192 WDNQYIWAMQRDWRQWKLGWRLEDLAQRMATQREWLQALLRIGEDRRFAAKGTKHPSAGVVAAXXXXXXXXTAQAKETAWRRPVGVAAGV-TDGDASWRGPAVLMEMRSFLLNGSNTFR---LECGIREGIFLQVGTTAMNANPAESCGVHVGGTDRADPRSLFERVDLGDDGAFGLRAVSNGKFLRLTPPGEDGVRQDWRT---EVFSPVPGLAERLRLRNGMLYSELLKGFLACNDERQYTAILGRPMEALRAGDTTQYAFHFSPVPREVVAGAAAFVEASRLMLEKCQAAIDRYVASRRAEAYRAAVPGRRMALEAAAAGAAGKETAAALAGAALVGAEGAKPPMVVAVLVPMTSASTDMSSVDNSPLWPNLFGSFLDSIDW 1325
WD Y+ A+ D W LGWRLEDLA++ QR + LL K T P A A G A +G+ G + + N R + C R +++QVG M A+ C V+ T DP +LFE+++LG+ G F LRA SN +FLR+ PP DW EV +P GL E ++R+GM+YSE++ G+L+C+ + G E L + + Y F V E V A + SR + + Q D Y+ + +A R + + +AV +PMTS T M+S +SP+W + F +FL S D+
Sbjct: 37 WDKLYMRAVVDDEEHWNLGWRLEDLAKQTLNQRARMAVLLE-------TLKNTPLPDLKHSGVFSIPKAAKAAAAWVGGXXXXTGDGAPRGAEGEEEGGGVSRAVSFSKVFAEEENLNRVVAISCATRPNVYVQVGMHPMVASAEAGCKVYSAATS-LDPHALFEKIELGE-GRFALRAFSNRRFLRVVPPPPTTGWSDWTVWALEVGAPEVGLPEVFQMRDGMVYSEVMHGYLSCSGAGAEAEVKGFVGEYLWQNEES-YQLIFDQVSHEAVERARLLRDVSRAVNYRQQREADEYIEAAERDAER----------------------------------RNNRKRITIAVCIPMTSRGTLMNSPYDSPVWTHAFSTFLSSTDF 377
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A6V1PYQ3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PYQ3_HETAK) HSP 1 Score: 120 bits (300), Expect = 3.550e-25 Identity = 61/140 (43.57%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 1639 RIEFRFYLGFDKGDPMYDTGDAWSDMRRAFDRRGAAAXXXXXXXXXXX-------RIKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAFV 2037
R +F F++GFDKGDP+YD GD+W+D R+ F ++ ++L F L GAPSQ+V+ LA A G +Y++Q NDDT I T+ W F LASNP+ PN GVTGP D N I THAFV
Sbjct: 147 RNKFTFFIGFDKGDPIYDLGDSWNDFRKEFKSNAGMGISWQTGMSPEKVTNILETQLAVELHDFGDLAGAPSQVVNRLAGLAYDAGFDYIYQINDDTEIETKQWHLKFMKALASNPVFPNFGVTGPTDSLNPKIFTHAFV 286
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A7S3ZR36_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR36_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.140e-24 Identity = 125/428 (29.21%), Postives = 170/428 (39.72%), Query Frame = 3
Query: 183 KAFWDNQYIWAMQRDWRQWKLGWRLEDLAQRMATQREWLQALLRIGEDRRFAAKGTKHPSAGVVAAXXXXXXXXTAQAKETAWRRPVGVAAGVTDGDASWRGPAVLMEMRSFLLNGSNTFRLECGIREGIFLQVGTTAMNANPAESC----GVHVGGTDRADPRSLFERVDLGDDGAFGLRAVSNGKFLRLTPPGEDGVRQ-DWRTEVFSPVPGLAERLRLRN---------------------------------GMLYSELLKGFLACNDERQYTAILGRPMEALRAGDTTQYAFHFSPVPREVVAGAAAFVEASRLMLEKCQAAIDRYVASRRAEAYRAAV---------PGRRMALEAAAAGAAGKETAAALAGAALVGAEGAKPPMVVAVLVPMTSASTDMSSVDNSPLWPNLFGSFLDSIDW 1325
+A WD++YI A++ +WKLGWRLEDL R+ +QR AL+ DGD AV + LEC R G + VG + A+ C G+ V P LFE V L DD A GLRA+SNGKF R+ PG++ W E SP+PGLAER +LRN MLYSEL++GF+ CN + G EA ++ F+ + +A A + AS+ E+ +A D A+RRA A+ PG R+ +A +G + VA++VPMTS TDM V+ SPLW NLF SF++S+DW
Sbjct: 36 QALWDDRYIDAVRSSPEEWKLGWRLEDLESRLHSQRRVADALVE-------------------------------------------------ADGDVQHLVSAVSGHEEEY-------HTLECVSRLGKRVHVGPDEFR-DMADRCHLFSGLDVKDAPAVGPHELFEVVPLDDD-AVGLRALSNGKFARVRAPGDEAAWDAPWTVEFASPLPGLAERFQLRNVPKPSAQDDVVKAQDDPWSGVTTTETKAWAPSFRMLYSELMRGFIQCNGGGVSEPVRGFSGEAADES-RVEFQFNLTRADAATMAKARELLRASK-HAEELRAKAD---ANRRARLLAASAERGEKFSLKPGERLPRRGPSALDSGS--------------------LKVAIVVPMTSRGTDMDGVEQSPLWFNLFASFVESVDW 380
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A7S2FLT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLT9_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.570e-23 Identity = 54/105 (51.43%), Postives = 66/105 (62.86%), Query Frame = 1
Query: 1645 EFRFYLGFDKGDPMYDTGDAWSDMRRAFDRRGAAAXXXXXXXXXXXR------IKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATF 1941
EF FYLG DKGD +YDTGDAWSDMR AF + A + + LKLMHFDG GAPSQ+V L +A DG +Y FQ NDDT+IV++ WA++F
Sbjct: 123 EFTFYLGLDKGDSLYDTGDAWSDMRSAFAKNTRRALTWLNVNNSTQKSVLGDQLHLKLMHFDGTSGAPSQVVCGLVQQAYDDGVDYFFQVNDDTVIVSKDWASSF 227
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A812U7Y0_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812U7Y0_SYMMI) HSP 1 Score: 105 bits (261), Expect = 8.500e-22 Identity = 56/119 (47.06%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 1699 DAWSDMRRAFDRRGAAAXXXXXXXXXXX------RIKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAFV 2037
DAW+DMR F +R A ++ LKL FD LQGAPSQ+VS+L + D +Y +Q NDDT IVT WA F L NPL PN+GVTGP D NR I TH+FV
Sbjct: 1 DAWNDMREYFKKRAALRLKDQLIEDNEIEEILQNQLILKLSDFDHLQGAPSQVVSQLMLKGYSDNYDYFYQVNDDTQIVTPNWAPIFVKALQDNPLAPNVGVTGPSDTHNRQIFTHSFV 119
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A7S3HK59_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK59_9STRA) HSP 1 Score: 105 bits (261), Expect = 9.540e-22 Identity = 53/117 (45.30%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1705 WSDMRRAFDRRGA------AAXXXXXXXXXXXRIKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAFV 2037
WS++R F R ++ LKLMHFD L+GAPSQ+VS+L A MD +Y +Q NDDT+I + WA A LASNP PN GVTGP D N I TH+FV
Sbjct: 1 WSELREEFRHRATYRMLEQLMEEADINAVLEEKLSLKLMHFDHLEGAPSQVVSQLMLSAYMDNFDYFYQVNDDTIITSPNWAPKLVAALASNPSIPNFGVTGPSDSNNEKIFTHSFV 117
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A482RTF1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTF1_9ARCH) HSP 1 Score: 97.4 bits (241), Expect = 3.530e-20 Identity = 44/84 (52.38%), Postives = 58/84 (69.05%), Query Frame = 1
Query: 1783 RIKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAF 2034
R+ LKLMHFD L+GAPSQ+VS+L A +G +Y +Q NDDT+IV+ W +L ++PL PN+GVTGP D N I TH+F
Sbjct: 37 RLSLKLMHFDHLEGAPSQVVSQLVLTAHSEGYDYFYQINDDTVIVSPNWPVRLMEVLQNSPLLPNMGVTGPTDSQNEKIFTHSF 120
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Match: A0A7S2CTF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CTF8_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 1.640e-17 Identity = 57/139 (41.01%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 1636 ARIEFRFYLGFDKGDPMYDTGDA---WSDM--RRAFDRRGAAAXXXXXXXXXXXRIKLKLMHFDGLQGAPSQIVSELAAEACMDGANYLFQANDDTLIVTRGWAATFAALLASNPLHPNLGVTGPRDGTNRNILTHAFV 2037
+R +RFY+G D GD +YD+ A +S++ RR R I L+LM +G GAPS V+ L A DGA++LFQ NDD ++T GW LASN + LGVTGP D TN I TH FV
Sbjct: 98 SRFRYRFYVGCDAGDKLYDSEAARKKFSELFVRRVGHHRTNGFDDGVSKDDSEDLIGLRLMSLEGTSGAPSWAVAALMKRAYDDGADWLFQLNDDARLLTLGWELRLTGALASNQVTRLLGVTGPTDLTNPRIFTHVFV 236 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6698.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6698.1.1 >prot_P-wetherbeei_contig6698.1.1 ID=prot_P-wetherbeei_contig6698.1.1|Name=mRNA_P-wetherbeei_contig6698.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp MYDTGDAWSDMRRAFDRRGAAAAGAAAAAAATARIKLKLMHFDGLQGAPSback to top mRNA from alignment at P-wetherbeei_contig6698:58..3342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6698.1.1 ID=mRNA_P-wetherbeei_contig6698.1.1|Name=mRNA_P-wetherbeei_contig6698.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3285bp|location=Sequence derived from alignment at P-wetherbeei_contig6698:58..3342+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6698:58..3342+ >mRNA_P-wetherbeei_contig6698.1.1 ID=mRNA_P-wetherbeei_contig6698.1.1|Name=mRNA_P-wetherbeei_contig6698.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig6698:58..3342+ (Phaeothamnion wetherbeei SAG_119_79)back to top |