prot_P-wetherbeei_contig6688.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6688.2.1
Unique Nameprot_P-wetherbeei_contig6688.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length69
Homology
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BLAST of mRNA_P-wetherbeei_contig6688.2.1 vs. uniprot
Match: A0A835Z3Q2_9STRA (Omp85 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Q2_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 8.480e-11
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:    1 MVVNDVAVKDTTLIPKDVLSTAAVASGLLGSNCGVEELQTCARYIDGWYASNGYRVSRVVRAELLP 66
            +VV DV V  T ++PK+VL+TA+V SGLLG+    + L  C R I+GWY S GY +S V  A + P
Sbjct:  135 VVVQDVVVNGTQVLPKEVLNTASVESGLLGAPFDQKRLAACIRIINGWYNSQGYVLSTVAEASVFP 200
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BLAST of mRNA_P-wetherbeei_contig6688.2.1 vs. uniprot
Match: A0A6H5KZW3_9PHAE (Omp85 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZW3_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 1.040e-9
Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = 0 
Query:    1 MVVNDVAVKDTTLIPKDVLSTAAVASGLLGSNCGVEELQTCARYIDGWYASNGYRVSRVVRAELLP 66
            ++V DV V D ++IP+DVL++AAV SGLLG    VE +Q CAR +  WY   G+ +S VV A + P
Sbjct:  234 VLVADVVV-DNSIIPRDVLTSAAVKSGLLGREASVERIQACARILSEWYQYEGHILSGVVNAAISP 298
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BLAST of mRNA_P-wetherbeei_contig6688.2.1 vs. uniprot
Match: D8LKK3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKK3_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.920e-9
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = 0 
Query:    1 MVVNDVAVKDTTLIPKDVLSTAAVASGLLGSNCGVEELQTCARYIDGWYASNGYRVSRVVRAELLP 66
            ++V DV V D ++IP+DVL++AAV SGLLG    VE +Q CAR +  WY   G+  S VV A + P
Sbjct:   38 VLVADVVV-DNSIIPRDVLASAAVKSGLLGREASVERIQACARILSEWYQYEGHIFSGVVNAAISP 102
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6688.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z3Q2_9STRA8.480e-1148.48Omp85 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5KZW3_9PHAE1.040e-948.48Omp85 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LKK3_ECTSI1.920e-948.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013686Polypeptide-transport-associated, ShlB-typePFAMPF08479POTRA_2coord: 3..60
e-value: 9.8E-5
score: 22.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6688contigP-wetherbeei_contig6688:2546..2752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6688.2.1mRNA_P-wetherbeei_contig6688.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6688 2531..2752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6688.2.1 ID=prot_P-wetherbeei_contig6688.2.1|Name=mRNA_P-wetherbeei_contig6688.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=69bp
MVVNDVAVKDTTLIPKDVLSTAAVASGLLGSNCGVEELQTCARYIDGWYA
SNGYRVSRVVRAELLPEKG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013686Polypept-transport_assoc_ShlB