mRNA_P-wetherbeei_contig6677.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: E0XS38_9PROT (Uncharacterized protein (Fragment) n=1 Tax=uncultured alpha proteobacterium HF0070_14E07 TaxID=710804 RepID=E0XS38_9PROT) HSP 1 Score: 177 bits (449), Expect = 6.710e-55 Identity = 87/132 (65.91%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 16 TPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLP--RACAHPHLRCLA*DPLHFRRRTA*PVSYYAFFKGWLLLSQPPGCLSRPTSFPT 405
T +R NIN++PIDY FRPRLRGRLTL GLTL RNPW YG+ VSH +CRYSCQHSHFRYLQ + TFTGLRNAPLP + + + L+ D + + PVSYYAFFKGWLLLSQPPGCL PTSFPT
Sbjct: 8 TTTRLRNINLIPIDYGFRPRLRGRLTLGGLTLPRNPWAYGESVSHTLCRYSCQHSHFRYLQHPSQDTFTGLRNAPLPCVKDTSSASVYGLSPDTSSAQAGLSRPVSYYAFFKGWLLLSQPPGCLGLPTSFPT 139
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: A0A0P6G9A6_9CRUS (Uncharacterized protein (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P6G9A6_9CRUS) HSP 1 Score: 129 bits (325), Expect = 3.970e-36 Identity = 66/103 (64.08%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 10 PSTPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLPRACA-HPHLRCLA*DPLHFRRRTA 315
PS SRPTNINVVPIDY R RLRGRLTL L L RNPW +GD SH V RYSC HSHFRYL L F GLRNAPLP + +P LRC+ PLH RRR +
Sbjct: 27 PSHTSRPTNINVVPIDYPLRARLRGRLTLLRLALSRNPWNFGDSASHTVNRYSCLHSHFRYLHDPLPDRFNGLRNAPLPLSQRLNPKLRCITLAPLHLRRRIS 129
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: A0A7R9S1H0_9CRUS (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9S1H0_9CRUS) HSP 1 Score: 127 bits (319), Expect = 7.090e-36 Identity = 59/80 (73.75%), Postives = 65/80 (81.25%), Query Frame = 1
Query: 10 PSTPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLPR 249
PS +RPTNINVVPIDY R RLRGRLTLRGL LRRNPW++G+R SHP+ RYSC HSHFRYL L FTG+RNAPLPR
Sbjct: 1 PSHTTRPTNINVVPIDYPLRARLRGRLTLRGLALRRNPWSFGERASHPLYRYSCLHSHFRYLHDPLPDRFTGVRNAPLPR 80
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: Q3BKI0_9PROT (Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense TaxID=55518 RepID=Q3BKI0_9PROT) HSP 1 Score: 121 bits (304), Expect = 1.000e-32 Identity = 57/70 (81.43%), Postives = 61/70 (87.14%), Query Frame = 1
Query: 1 LTLPSTPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLR 210
LT T SRPTNINVVPIDYAFRPRLRGRLTLRGL LRRNPWT+G+ VSH +CRYSCQHSHFRYLQ+ R
Sbjct: 81 LTKVVTSSRPTNINVVPIDYAFRPRLRGRLTLRGLALRRNPWTFGESVSHTLCRYSCQHSHFRYLQRPSR 150
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: A0A7S3ICQ2_9CILI (Hypothetical protein (Fragment) n=1 Tax=Anophryoides haemophila TaxID=46462 RepID=A0A7S3ICQ2_9CILI) HSP 1 Score: 120 bits (301), Expect = 1.290e-32 Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 1
Query: 10 PSTPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLPR 249
PS +RPTNINVVPIDY R RLRGRLTL L L RNPW++G+R SHP+ RYSC HSHFRYL L FTGLRNAPLPR
Sbjct: 42 PSHTTRPTNINVVPIDYPLRARLRGRLTLLRLALSRNPWSFGERASHPLYRYSCLHSHFRYLHDPLPDRFTGLRNAPLPR 121
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: A0A166H1M7_9BACT (Uncharacterized protein n=1 Tax=uncultured bacterium 5H7 TaxID=1701327 RepID=A0A166H1M7_9BACT) HSP 1 Score: 111 bits (278), Expect = 1.810e-29 Identity = 55/92 (59.78%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 43 VVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLPRACA-HPHLRCLA*DPLHFRRRTA 315
+VPIDY R RLRGRLTL L L RNPW++GD SH V RYSCQHSHFRYL L F LRNAPLP + +P LRC+ P+H RRR +
Sbjct: 1 MVPIDYPLRARLRGRLTLLRLALSRNPWSFGDSASHTVYRYSCQHSHFRYLHGPLPDRFISLRNAPLPLSQRLNPKLRCITLAPIHLRRRIS 92
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: H6SIE3_PARPM (Uncharacterized protein n=1 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIE3_PARPM) HSP 1 Score: 110 bits (276), Expect = 4.600e-29 Identity = 51/70 (72.86%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 37 INVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLP 246
IN++ I Y FRPRLR RLTLRGLTLRRNPW +G VSH RYSCQHSH YLQQ+ R+TFTG+RNAPLP
Sbjct: 23 INLIAIAYGFRPRLRDRLTLRGLTLRRNPWAFGGSVSHTSFRYSCQHSHXXYLQQSSRTTFTGVRNAPLP 92
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: H6SID8_PARPM (Uncharacterized protein (Fragment) n=2 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SID8_PARPM) HSP 1 Score: 110 bits (276), Expect = 1.720e-28 Identity = 51/70 (72.86%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 37 INVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRSTFTGLRNAPLP 246
IN++ I Y FRPRLR RLTLRGLTLRRNPW +G VSH RYSCQHSH YLQQ+ R+TFTG+RNAPLP
Sbjct: 58 INLIAIAYGFRPRLRDRLTLRGLTLRRNPWAFGGSVSHTSFRYSCQHSHXXYLQQSSRTTFTGVRNAPLP 127
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL) HSP 1 Score: 116 bits (291), Expect = 1.730e-28 Identity = 65/117 (55.56%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 28 PTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHFRYLQQTLRS----TFTGLRNAPLPRACAHPHLRCLA*DPLHFRRRTA*PVSYYAFFKGWLLLSQ 366
PTNINVVPIDYA PRLRGRLTL LTL RNPW++G+ VSHP+ RYSCQHSHFRYLQ+ T+ LR R +P LRC+A PLHFRR+ Y F+G +S+
Sbjct: 247 PTNINVVPIDYACPPRLRGRLTLLRLTLSRNPWSFGEGVSHPLYRYSCQHSHFRYLQRPSTGPPSQTYGTLRYHSSKR---NPQLRCMALAPLHFRRKD----PYLDQFRGEPAISE 356
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Match: A0A2L2YH53_PARTP (Uncharacterized protein (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YH53_PARTP) HSP 1 Score: 102 bits (253), Expect = 3.970e-26 Identity = 47/57 (82.46%), Postives = 48/57 (84.21%), Query Frame = 1
Query: 16 TPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHPVCRYSCQHSHF 186
TP RPT IN VPID AFRPRLR RLTLR LTLRRNPWT+GD V H VCRYSCQHSHF
Sbjct: 2 TPRRPTKINAVPIDSAFRPRLRDRLTLRRLTLRRNPWTFGDTVFHSVCRYSCQHSHF 58 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6677.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6677.5.1 >prot_P-wetherbeei_contig6677.5.1 ID=prot_P-wetherbeei_contig6677.5.1|Name=mRNA_P-wetherbeei_contig6677.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp LTLPSTPSRPTNINVVPIDYAFRPRLRGRLTLRGLTLRRNPWTYGDRVSHback to top mRNA from alignment at P-wetherbeei_contig6677:1045..1449+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6677.5.1 ID=mRNA_P-wetherbeei_contig6677.5.1|Name=mRNA_P-wetherbeei_contig6677.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig6677:1045..1449+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6677:1045..1449+ >mRNA_P-wetherbeei_contig6677.5.1 ID=mRNA_P-wetherbeei_contig6677.5.1|Name=mRNA_P-wetherbeei_contig6677.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig6677:1045..1449+ (Phaeothamnion wetherbeei SAG_119_79)back to top |