mRNA_P-wetherbeei_contig6677.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6677.2.1
Unique NamemRNA_P-wetherbeei_contig6677.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A6A5LAN1_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LAN1_LUPAL)

HSP 1 Score: 199 bits (505), Expect = 2.390e-60
Identity = 105/149 (70.47%), Postives = 114/149 (76.51%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQR-PPQSNCPPRRVLIPDNGTKLDIRKRKGGISPVPPSELTPQLHRLPPILHIHFLIPLRSYSKG 444
            VSRR KP+SRTTL GEQP PWD LQPQDVMSRHRGAKL RRY LLG ISLLS EYLLSVERWPFH EPPDHY  LS LLDLSVSQR PPQSNC P  V  PD+G +L+ +  +GGIS + P EL   L  LPPILH     P++SYSKG
Sbjct:  132 VSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSYLLDLSVSQRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRLAPRELASPLQSLPPILHRLVQSPMQSYSKG 280          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A8H2LVE7_BURPE (Cell wall-associated hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A8H2LVE7_BURPE)

HSP 1 Score: 184 bits (468), Expect = 3.070e-56
Identity = 102/178 (57.30%), Postives = 113/178 (63.48%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ-----------------------------RPPQSNCPPRRVLIPDNGTKLDIRKRKGGISPVPPSELTPQLHRLPPILHIHFLIPLRSYSKGS 447
            VSRR KP+SRT+L GEQP PWD LQPQD MSRHRGAK  RRY LLG ISLLS EYLLSVERWPFH EPPDHY  LS LLDLSVSQ                             RPPQSNC P  V  PD+G +L+ +  +GGIS   P +L  + H LPPILH     P++SYSKGS
Sbjct:   52 VSRRFKPSSRTSLNGEQPYPWDRLQPQDEMSRHRGAKHRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQLSTLMPLHYQHDFRPYLAYLRTPPLRFGRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPPKLAFRFHSLPPILHRSVQSPMQSYSKGS 229          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A6A5LEB1_LUPAL (AAA_5 domain-containing protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LEB1_LUPAL)

HSP 1 Score: 199 bits (505), Expect = 3.480e-56
Identity = 105/149 (70.47%), Postives = 114/149 (76.51%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQR-PPQSNCPPRRVLIPDNGTKLDIRKRKGGISPVPPSELTPQLHRLPPILHIHFLIPLRSYSKG 444
            VSRR KP+SRTTL GEQP PWD LQPQDVMSRHRGAKL RRY LLG ISLLS EYLLSVERWPFH EPPDHY  LS LLDLSVSQR PPQSNC P  V  PD+G +L+ +  +GGIS + P EL   L  LPPILH     P++SYSKG
Sbjct: 2958 VSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSYLLDLSVSQRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRLAPRELASPLQSLPPILHRLVQSPMQSYSKG 3106          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A6A5LFC3_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LFC3_LUPAL)

HSP 1 Score: 197 bits (502), Expect = 8.870e-56
Identity = 105/149 (70.47%), Postives = 113/149 (75.84%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQR-PPQSNCPPRRVLIPDNGTKLDIRKRKGGISPVPPSELTPQLHRLPPILHIHFLIPLRSYSKG 444
            VSRR KP+SRTTL GEQP PWD LQPQDVMSRHRGAKL RRY LLG ISLLS EYLLSVERWPFH EPPDHY  LS LLDLSVSQR PPQSNC P  V  PD G +L+ +  +GGIS + P EL   L  LPPILH     P++SYSKG
Sbjct: 3980 VSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSYLLDLSVSQRRPPQSNCLPCTVPDPDYGPRLEPQTNQGGISRLAPRELASPLQSLPPILHRLVQSPMQSYSKG 4128          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A510LIN6_NEIGO (Cell wall-associated hydrolase n=3 Tax=Neisseria TaxID=482 RepID=A0A510LIN6_NEIGO)

HSP 1 Score: 172 bits (436), Expect = 1.260e-51
Identity = 97/164 (59.15%), Postives = 104/164 (63.41%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ-----------------------------RPPQSNCPPRRVLIPDNGTKLDIRKRKGGISPVPPSELTPQLHRLPPILH 405
            VSRR KP+SRTTL GEQP PWD LQPQDVMSRHRGAKL RRY LLG ISLLS EYLLSVERWPFH EPPDHY  LS L DLSVSQ                             RPPQSNC P  V  PD+G+ L+ ++ +GGIS   P  L   L  LPPILH
Sbjct:   52 VSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLPDLSVSQLSYLLPLHYQSDFRPDLGNLRTPPLRFGRRPPQSNCLPCTVPDPDDGSGLEPQRHQGGISRTTPQRLASLLPSLPPILH 215          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: I3D5P0_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 TaxID=859350 RepID=I3D5P0_9ARCH)

HSP 1 Score: 166 bits (420), Expect = 1.080e-49
Identity = 90/145 (62.07%), Postives = 96/145 (66.21%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ-----------------------------RPPQSNCPPRRVLIPDNGTKLDIRKRKGGIS 348
            VSRR KP+SRTTL GEQP PWD LQPQDVMSRHRGAKL RRY LLG ISLLS EYLLSVERWPFH EPPDHY  LS LLDLSVSQ                             RPPQSNCPP  V  PD G +L+ ++ +GGIS
Sbjct:   31 VSRRFKPSSRTTLNGEQPYPWDRLQPQDVMSRHRGAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPDPDYGPRLEPQQHQGGIS 175          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A6B2E5S5_9DIPT (Putative cell wall-associated hydrolase (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E5S5_9DIPT)

HSP 1 Score: 158 bits (399), Expect = 1.470e-46
Identity = 88/149 (59.06%), Postives = 96/149 (64.43%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ-----------------------------RPPQSNCPPRRVLIPDNGTKLDIRKRKGGISPVPP 360
            VSRR KP+SRT+L GEQP PWD LQPQD MSRHRGAK  RR  LLG ISLLS EYLLSVERWPFH EPPDHY  LS LLDLSVSQ                             RPPQSNCPP  V  PDNG++L+ +  +GGIS + P
Sbjct:   27 VSRRFKPSSRTSLNGEQPYPWDRLQPQDEMSRHRGAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLLDLSVSQSSTLMPLHYQYDVRPYLAYLRAPPLLFRRRPPQSNCPPCTVPDPDNGSRLEPQTDQGGISRMAP 175          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A1C8C9M4_9HYPH (Glycerol kinase n=10 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1C8C9M4_9HYPH)

HSP 1 Score: 154 bits (388), Expect = 3.390e-45
Identity = 74/85 (87.06%), Postives = 77/85 (90.59%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ 255
            VSRRS+P+SRT LIGEQPNPWDLLQPQD MSRHRGAK  RRYGLLG ISLLS  YLLSVERWPFH+EPPDHY RLSSLLDLSVSQ
Sbjct:   52 VSRRSEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLLSPAYLLSVERWPFHSEPPDHYDRLSSLLDLSVSQ 136          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A5J4DT10_9BACT (Uncharacterized protein n=1 Tax=bacterium MnTg02 TaxID=2080452 RepID=A0A5J4DT10_9BACT)

HSP 1 Score: 153 bits (386), Expect = 6.810e-45
Identity = 74/85 (87.06%), Postives = 77/85 (90.59%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ 255
            VSRRSKP+SRT+LIGEQPNPWDLLQPQD MSRHRGAK  RRYGLLG ISLLS EYLLSVERWPFH  PPDHY RLS+LLDLSVSQ
Sbjct:   52 VSRRSKPSSRTSLIGEQPNPWDLLQPQDEMSRHRGAKQRRRYGLLGVISLLSPEYLLSVERWPFHTGPPDHYDRLSTLLDLSVSQ 136          
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Match: A0A397S2L0_9GLOM (Cell wall-associated hydrolase n=4 Tax=Eukaryota TaxID=2759 RepID=A0A397S2L0_9GLOM)

HSP 1 Score: 152 bits (385), Expect = 9.660e-45
Identity = 75/85 (88.24%), Postives = 77/85 (90.59%), Query Frame = 1
Query:    1 VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISLLSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQ 255
            VSRRS+P+SRTTLIGEQPNPWDLLQPQDVMSRHRGAK  RRYGLLG ISLLS  YLLSVERWP HA PPDHY RLSSLLDLSVSQ
Sbjct:   52 VSRRSEPSSRTTLIGEQPNPWDLLQPQDVMSRHRGAKRPRRYGLLGVISLLSPAYLLSVERWPTHAGPPDHYDRLSSLLDLSVSQ 136          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6677.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5LAN1_LUPAL2.390e-6070.47Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A8H2LVE7_BURPE3.070e-5657.30Cell wall-associated hydrolase n=3 Tax=Proteobacte... [more]
A0A6A5LEB1_LUPAL3.480e-5670.47AAA_5 domain-containing protein n=1 Tax=Lupinus al... [more]
A0A6A5LFC3_LUPAL8.870e-5670.47Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A510LIN6_NEIGO1.260e-5159.15Cell wall-associated hydrolase n=3 Tax=Neisseria T... [more]
I3D5P0_9ARCH1.080e-4962.07Uncharacterized protein n=1 Tax=Candidatus Nitroso... [more]
A0A6B2E5S5_9DIPT1.470e-4659.06Putative cell wall-associated hydrolase (Fragment)... [more]
A0A1C8C9M4_9HYPH3.390e-4587.06Glycerol kinase n=10 Tax=Hyphomicrobiales TaxID=35... [more]
A0A5J4DT10_9BACT6.810e-4587.06Uncharacterized protein n=1 Tax=bacterium MnTg02 T... [more]
A0A397S2L0_9GLOM9.660e-4588.24Cell wall-associated hydrolase n=4 Tax=Eukaryota T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6677contigP-wetherbeei_contig6677:2..538 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog439493.PB7211_763
Model size450
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.78e-48
EggNOG OGs2AU0F@1|root,31JKB@2|Bacteria,1RGGF@1224|Proteobacteria,2U8PC@28211|Alphaproteobacteria,4BRYT@82117|unclassified Alphaproteobacteria
DescriptionCOG NOG14600 non supervised orthologous group
Cds size450
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186929.2106287-CDS-P-wetherbeei_contig6677:1..2551683186929.2106287-CDS-P-wetherbeei_contig6677:1..255Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6677 2..255 +
1683186929.2198129-CDS-P-wetherbeei_contig6677:342..5381683186929.2198129-CDS-P-wetherbeei_contig6677:342..538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6677 343..538 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6677.2.1prot_P-wetherbeei_contig6677.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6677 2..538 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6677.2.1

>prot_P-wetherbeei_contig6677.2.1 ID=prot_P-wetherbeei_contig6677.2.1|Name=mRNA_P-wetherbeei_contig6677.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp
VSRRSKPNSRTTLIGEQPNPWDLLQPQDVMSRHRGAKLCRRYGLLGKISL
LSLEYLLSVERWPFHAEPPDHYGRLSSLLDLSVSQRPPQSNCPPRRVLIP
DNGTKLDIRKRKGGISPVPPSELTPQLHRLPPILHIHFLIPLRSYSKGS*
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mRNA from alignment at P-wetherbeei_contig6677:2..538+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6677.2.1 ID=mRNA_P-wetherbeei_contig6677.2.1|Name=mRNA_P-wetherbeei_contig6677.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=537bp|location=Sequence derived from alignment at P-wetherbeei_contig6677:2..538+ (Phaeothamnion wetherbeei SAG_119_79)
GTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTAATCGGCGAACA GCCGAACCCTTGGGACCTGCTCCAGCCCCAGGATGTGATGAGCCGACATC GAGGTGCCAAACTTTGCCGTCGATATGGACTCTTGGGCAAAATCAGCCTG TTATCCCTAGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCAGA ACCACCGGATCACTATGGCCGACTTTCGTCTCTGCTCGACTTGTCGGTCT CGCAGTCAGGCGGGCTTATGCCATTGCACTCGAAAGCTGATTTCCGACCA GCTTGAGCCCACCATCGCGCGCCTCCGTTACTCTTTGGGAGGCGACCGCC CCAGTCAAACTGTCCACCACGCAGGGTCCTTATCCCGGATAACGGGACGA AGTTAGATATCAGAAAACGCAAGGGCGGTATTTCACCGGTGCCTCCATCA GAGCTGACGCCCCAACTTCATAGGCTCCCGCCTATCCTACACATTCATTT CCTAATACCACTGCGAAGTTACAGTAAAGGTTCATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6677:2..538+

>mRNA_P-wetherbeei_contig6677.2.1 ID=mRNA_P-wetherbeei_contig6677.2.1|Name=mRNA_P-wetherbeei_contig6677.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig6677:2..538+ (Phaeothamnion wetherbeei SAG_119_79)
GTCTCACGACGTTCTAAACCCAACTCACGTACCACTTTAATCGGCGAACA
GCCGAACCCTTGGGACCTGCTCCAGCCCCAGGATGTGATGAGCCGACATC
GAGGTGCCAAACTTTGCCGTCGATATGGACTCTTGGGCAAAATCAGCCTG
TTATCCCTAGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCACGCAGA
ACCACCGGATCACTATGGCCGACTTTCGTCTCTGCTCGACTTGTCGGTCT
CGCAGCGACCGCCCCAGTCAAACTGTCCACCACGCAGGGTCCTTATCCCG
GATAACGGGACGAAGTTAGATATCAGAAAACGCAAGGGCGGTATTTCACC
GGTGCCTCCATCAGAGCTGACGCCCCAACTTCATAGGCTCCCGCCTATCC
TACACATTCATTTCCTAATACCACTGCGAAGTTACAGTAAAGGTTCATAG
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