prot_P-wetherbeei_contig6676.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6676.1.1
Unique Nameprot_P-wetherbeei_contig6676.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length265
Homology
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BLAST of mRNA_P-wetherbeei_contig6676.1.1 vs. uniprot
Match: A0A6H5KH38_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH38_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.450e-5
Identity = 33/79 (41.77%), Postives = 44/79 (55.70%), Query Frame = 0 
Query:  189 VRLPMGSSLSCAMSPDDTLASVLEALDVASVLGS---SRELELRCPVPLPGRVYCREELAAVTLAAAGLVPRGTLIVQF 264
            +RLP G+S + +     TL  VL  L           S+EL+LRCP P PGR    +EL + T+ + GL PRG L+VQF
Sbjct:  156 MRLPDGTSTTHSFGTAATLREVLTWLQSTEPTAGKLRSKELQLRCPFPPPGRAIAGDELDSSTVESVGLFPRGRLMVQF 234
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6676.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KH38_9PHAE1.450e-541.77UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 176..264
e-value: 2.2E-9
score: 39.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableCDDcd01767UBXcoord: 189..263
e-value: 1.73267E-7
score: 45.7172
IPR001012UBX domainPROSITEPS50033UBXcoord: 180..262
score: 9.13
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 178..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6676contigP-wetherbeei_contig6676:3..797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6676.1.1mRNA_P-wetherbeei_contig6676.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6676 3..1149 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6676.1.1 ID=prot_P-wetherbeei_contig6676.1.1|Name=mRNA_P-wetherbeei_contig6676.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=265bp
MEALLEAGFSQAEAESAMQSTSSVELAAELILARRAAAQRPGDGTLRLSV
PSAAATTSAAAPLPSPSAAAPPATPSKHSEEVAARQVLLEKAEAARRRTE
AVFRAEAKARKTRELAIFREQHEESKAKKSLKAAAAACTSTGDATPTGWS
TAPKPPSTPASTPTAAPPLTAAAAAATAAAAAPRVQLHVRLPMGSSLSCA
MSPDDTLASVLEALDVASVLGSSRELELRCPVPLPGRVYCREELAAVTLA
AAGLVPRGTLIVQFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-like_domsf