mRNA_P-wetherbeei_contig6662.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6662.1.1
Unique NamemRNA_P-wetherbeei_contig6662.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: D8LN03_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN03_ECTSI)

HSP 1 Score: 271 bits (693), Expect = 4.230e-81
Identity = 154/353 (43.63%), Postives = 201/353 (56.94%), Query Frame = 3
Query:  210 VRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLD-----------EQCLASFESAEG--GVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGS------------------AKGNAA----DLESTGGITTPTDEFQFWATYSGRSVDREALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            V+G  EL+ F DDP+T  L       G +RL N L+           E        AEG  G+ F+KLRPEP+TG NIR  VQV SM GSPL+SLYHS+HSVYAP LL++ A +  LSGK Q++I  LD+ L  AV  G G                    KGN +    +L   GGI  P+DEFQFW+ YSGR+ DRE + A+  A EP+R  FA    LQT E+EEL++ THTALD++WK + G               YPQ RM HL D +GAALCR +Q++L   D+W GP SDV  +L   A +  +W    E+L++++W  ++ HPW+GD H D  TAG   R EE+
Sbjct:   58 VQGRKELQLFLDDPNTAVLCVRAHPGGDLRLDNGLELLDGGSERETKEGGDEDESPAEGRVGLHFVKLRPEPVTGGNIRSLVQVSSMTGSPLNSLYHSVHSVYAPALLKNEAGRQELSGKVQSVIALLDSTLGDAVIYGGGGDISHDNDNSXXXXXXXEDRKGNTSRQNGNLSCFGGIVYPSDEFQFWSGYSGRAADRELVTAVARALEPLREPFAALSGLQTEELEELMDITHTALDEVWKADGGGGARGS---------YPQARMAHLFDVIGAALCRHVQEKLRPLDIWAGPLSDVRTRLLEGAQICSKWCRITEELSSSYWSGFIQHPWKGDPHVDNLTAGTAARLEEI 401          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: C3XXR3_BRAFL (DHC_N1 domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3XXR3_BRAFL)

HSP 1 Score: 199 bits (507), Expect = 2.680e-53
Identity = 130/354 (36.72%), Postives = 187/354 (52.82%), Query Frame = 3
Query:  141 DLREDFVADVIAD---LTEGKNSQANVRGAVELRSFFDDPDTPFLHALVQKDGT-----VRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRG--GSGSAKGNAADLESTGGITTPTDEFQFWA--TYSGRSVD-REALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            DLR+DFV    A+   L  G  S A + G+VE+ +F DD   P L A    DGT     V   N++++    S E ++  + F+KL+P+PIT DN+  NV V SM  SP+ +LYHSLH VYAP+LL+          K Q L+ ELD+ L + VR    SG +KG+  ++    GI TP+DEF++W     +GR ++ +E      + F+P+ A +   +SL   E  ELVE T   LDD+W                    YP+ RM HLM  +G AL R +Q +L+  DLW GP++ V   L  + ++ ERW  A + LT+T+      HPW+GD +        K R EE+
Sbjct:    4 DLRKDFVLASTANYFGLDPGDASLAKLHGSVEINNFLDDGGCPLLVAWC--DGTKGSAQVHFNNKVEQ----SGEKSQKTLVFVKLKPDPITTDNLHSNVFVSSMLDSPVMALYHSLHKVYAPMLLKDEKWSRMFDPKLQKLLSELDSSLGSVVRAQDSSGGSKGDDGNMT---GILTPSDEFRYWVDTAVTGRKLEVKERAEHFQSLFQPVSANYGNLESLSLLESAELVEQTEEVLDDVW-------------GQTEFPPYPEPRMAHLMGIIGGALARHIQLKLSGVDLWHGPYASVRESLRLSLSICERWISACDSLTSTWKQHSPLHPWQGDKYVPEALEQFKARLEEI 335          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: A0A1S3I1P2_LINUN (cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3I1P2_LINUN)

HSP 1 Score: 197 bits (501), Expect = 4.330e-52
Identity = 123/349 (35.24%), Postives = 178/349 (51.00%), Query Frame = 3
Query:  141 DLREDFVADVIAD---LTEGKNSQANVRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGSAKGNAADLE--STGGITTPTDEFQFW---ATYSGRSVDREALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D R+DF+     +   ++    S A++  + EL SF DD +   L A ++     + VN  +   +   ++ E  + F K++P+ IT DNI ++V V SM  SP+ +LYH++  V+AP+LL+          K Q+L+ EL+  L + +R    S  G   D +  + GGI TP+DEFQFW   A    + V +E  +     F+PI   FA+ DS+   E  ELVE T   LD++WK                   Y + RM HLMD +G AL R +Q++LA  D+W G FS V  KL A  +V ERW  A E LT  FW RY  HPW+GD         +  R EE+
Sbjct:    5 DSRKDFILATTGNYFGISPADGSIADLHNSSELNSFLDDGNVNILAARIETKAGGKEVNFCNR--VEPSDTNEKVIVFFKIKPDVITPDNIHRDVFVSSMLDSPVSALYHAVQKVFAPLLLKDEKWSKSFDPKLQSLLSELEAGLGSVIRKQDASYSGRQGDTDEDNLGGILTPSDEFQFWSEVAMSGAKLVIKERAQGFQEMFQPISKDFASLDSMALPECLELVELTQDTLDEVWKQTEHDPP------------YKESRMRHLMDVIGGALGRYIQRKLAQEDIWKGQFSKVKEKLRAGLSVCERWTSACETLTVQFWKRYGPHPWKGDKFVPENLTQLAARLEEI 339          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: A0A1S3JIZ4_LINUN (Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JIZ4_LINUN)

HSP 1 Score: 197 bits (501), Expect = 4.440e-52
Identity = 123/349 (35.24%), Postives = 178/349 (51.00%), Query Frame = 3
Query:  141 DLREDFVADVIAD---LTEGKNSQANVRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGSAKGNAADLE--STGGITTPTDEFQFW---ATYSGRSVDREALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D R+DF+     +   ++    S A++  + EL SF DD +   L A ++     + VN  +   +   ++ E  + F K++P+ IT DNI ++V V SM  SP+ +LYH++  V+AP+LL+          K Q+L+ EL+  L + +R    S  G   D +  + GGI TP+DEFQFW   A    + V +E  +     F+PI   FA+ DS+   E  ELVE T   LD++WK                   Y + RM HLMD +G AL R +Q++LA  D+W G FS V  KL A  +V ERW  A E LT  FW RY  HPW+GD         +  R EE+
Sbjct:    5 DSRKDFILATTGNYFGISPADGSIADLHNSSELNSFLDDGNVNILAARIETKAGGKEVNFCNR--VEPSDTNEKVIVFFKIKPDVITPDNIHRDVFVSSMLDSPVSALYHAVQKVFAPLLLKDEKWSKSFDPKLQSLLSELEAGLGSVIRKQDASYSGRQGDTDEDNLGGILTPSDEFQFWSEVAMSGAKLVIKERAQGFQEMFQPISKDFASLDSMALPECLELVELTQDTLDEVWKQTEHDPP------------YKESRMRHLMDVIGGALGRYIQRKLAQEDIWKGQFSKVKEKLRAGLSVCERWTSACETLTVQFWKRYGPHPWKGDKFVPENLTQLAARLEEI 339          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: A0A6P4Y869_BRABE (Cytoplasmic dynein 2 heavy chain 1 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y869_BRABE)

HSP 1 Score: 189 bits (479), Expect = 3.660e-49
Identity = 124/349 (35.53%), Postives = 179/349 (51.29%), Query Frame = 3
Query:  141 DLREDFVADVIAD---LTEGKNSQANVRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRG--GSGSAKGNAADLESTGGITTPTDEFQFWA--TYSGRSVD-REALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D R+DFV    A+   L  G  S A +  + E+ +F DD   P L A    DG            ++  E ++  + F+KL+P+PIT DN+  NV V SM  SP+ +LYHSLH VYAP+LL+          K Q L+ ELD+ L + VR    SG +KG+ +++    GI TP+DEF++WA    +GR ++ +E      + F+P+ A +   +SL   E  ELVE T   LDD+W                    YP+ RM HLM  +G AL R +Q +L+  DLW GP++ V   L  + ++ ERW  A + LT+T+      HPW+GD          K R EE+
Sbjct:    4 DPRKDFVLASTANYFGLDSGDASLAKLHSSPEINNFLDDGGCPLLVAWC--DGAKGSTQVHFNNKVSYREKSQKTLVFVKLKPDPITPDNLHSNVFVSSMLDSPVMALYHSLHKVYAPMLLKDEKWSRMFDPKLQKLLSELDSSLGSVVRAQDSSGGSKGDDSNMT---GILTPSDEFRYWADAAVTGRKLEVKERAEHFQSLFQPVSANYGNLESLSLLEAAELVEQTEEVLDDVW-------------GQTEFPPYPEPRMAHLMGIIGGALARHIQLKLSGVDLWHGPYASVRESLRLSLSICERWISACDSLTSTWKQHSPLHPWQGDKCVPEALEQFKARLEEI 334          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: A7SBE7_NEMVE (Cytoplasmic dynein 2 heavy chain 1 n=4 Tax=Nematostella vectensis TaxID=45351 RepID=A7SBE7_NEMVE)

HSP 1 Score: 184 bits (468), Expect = 1.050e-47
Identity = 123/354 (34.75%), Postives = 180/354 (50.85%), Query Frame = 3
Query:  141 DLREDFVADVIAD---LTEGKNSQANVRGAVELRSFFDDPDTPFLHALV---QKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGSAKG--NAADLESTGGITTPTDEFQFWATYSGRSVD---REALRAINNAFEP--IRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D R+DFV    A+   +    ++ A V  + EL +F DD ++P L A     Q + TV L + ++       +SAE  + F KL+PE IT DN+ +NV V SM  SP+++LYHS+  ++AP+LL+          K Q+L+ EL+  L + VR  + S        D  S GGI TP DEFQ+WA  S    D   RE        F+   +   F+  D L   +  ELVE+T  +LD++WK E                 YP+ RM HL+  +G AL R +Q++L+A D+W GPF +V   +    +V ERW    E LT  +W R+  HPW+G+       + +  R EEV
Sbjct:    5 DSRKDFVLTTAANYFGVPISDSAFAEVSDSRELNAFLDDGNSPILAARFDTHQGNKTVELFDHVEPS-----DSAEKVIVFFKLQPEVITPDNLHQNVFVSSMLDSPINTLYHSVQKIFAPLLLKDEKWSRNFDPKLQSLLSELEAGLGSVVRKQNTSLARAVQPGDESSLGGILTPQDEFQYWADSSVSGYDLSERERAGFFQECFQKGNVSQDFSNLDGLDLDDTLELVESTQDSLDEVWKQE-------------DHKPYPEHRMCHLLSVIGGALARYVQRKLSALDIWQGPFQNVKEAMRKGVSVCERWVSTCETLTAQYWKRFPAHPWKGEKFVPENLSQLAARLEEV 340          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: UPI00077A7226 (LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7226)

HSP 1 Score: 184 bits (467), Expect = 1.380e-47
Identity = 120/351 (34.19%), Postives = 181/351 (51.57%), Query Frame = 3
Query:  141 DLREDFVADVIADLTEGKNSQA---NVRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVR--GGSGSAKGNAADLESTGGITTPTDEFQFW--ATYSGRSV-DREALRAINNAFEP--IRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            DLR+DF+     +    +NS +    VR + EL +F DD ++P L A        R ++      +   ++AE  + F KL+PE IT DN+ +NV V SM  SP+++LYHS+  V+AP+LL+          K Q+L+ EL+  L + VR    S S      D E+ GGI TP DEFQ+W  A+ SG  + +RE       +F+   +   F+  D+L   ++ EL+E+T  +LD+IWK E                 Y + RM+HL+D +  AL R +Q++L   D+W   F  V   +    +V ERW  + E LT+ FW R+  HPW G+  T    + +  R EEV
Sbjct:    5 DLRKDFIVATTGNYFGIQNSDSVLNEVRSSKELNTFLDDGNSPVLAAKYDTHQGKRAIHLSSH--VEPSDTAEKVLVFFKLQPEAITPDNLHQNVXVSSMLSSPVNTLYHSVQKVFAPLLLKDEKWSRNFDPKLQSLLSELEAGLGSVVRKQDSSSSRAAKVGDEENFGGILTPQDEFQYWSDASVSGYDLSERERASFFQESFQKGNVAQDFSNLDALDLDDILELLESTQDSLDEIWKQE-------------DHKPYSETRMKHLLDVMAGALGRYVQRKLGMLDIWHDSFQQVKDAMRKGISVCERWVSSCETLTSQFWKRFPSHPWRGEKFTPENLSNLAARLEEV 340          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: UPI00065B97ED (cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B97ED)

HSP 1 Score: 182 bits (463), Expect = 4.490e-47
Identity = 121/352 (34.38%), Postives = 175/352 (49.72%), Query Frame = 3
Query:  141 DLREDFVADVIAD---LTEGKNSQANVRGAVELRSFFDDPDTPFLHALV--QKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGSAKGNAAD--LESTGGITTPTDEFQFWATYS----GRSVDREALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D R+DFV    A+   +    N+  ++  A  L +F DD +   L   +  + D  +   NR++     S +S E  + F K+RPE IT DN + N+ V SM  SPL++LYH++  VYAP+LL        L  K Q+L+ EL+  L +A+R    S +G + D   E+ G I TP DEFQ+W   S    G    REA  +    F PI   +   D++   +  ELVE T   LDD+WK                   YP+ RM HLM+ +  +L R +Q++LA  ++WTG FS V   L     + ERW  + E LT+ FW RY  HPW+G+         +  R EE+
Sbjct:    4 DSRKDFVLVTTANYFAIPITDNAITSLFNATSLNNFLDDGNVTILAGKLDGRSDKKIDFQNRVE-----SSDSKERVIVFFKIRPEAITPDNTQSNIIVSSMIDSPLNTLYHAVQKVYAPLLLDDGKYSRNLDPKLQSLLSELEAGLGSAMRKKDPSFRGRSGDGGEENLGSILTPMDEFQYWQDLSRSSAGSGDQREAAESYVELFGPISKDYGGLDAMPLGDSMELVEITQDTLDDVWK--------------QGEPPYPEPRMRHLMEVIAGSLGRYVQQKLATVNMWTGQFSSVRESLRTGIGLCERWVSSCETLTSQFWKRYAPHPWKGETCKCRNLKKLADRLEEI 336          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: UPI001C089F90 (cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C089F90)

HSP 1 Score: 182 bits (462), Expect = 6.510e-47
Identity = 124/346 (35.84%), Postives = 182/346 (52.60%), Query Frame = 3
Query:  141 DLREDFVADVIADLTEGKNSQANVRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGSAKGN-AADLESTGGITTPTDEFQFWATYSGRSVDREALR--AIN--NAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D+R+ F+    A+    K S A + G  EL +F DD +  F+ A+++    ++L NR++     S +S E  + F KLRP  IT +N+ +NV V SM  SP+ +LY ++  V+APVLL+          K Q+L+ +L++ L + VR  + S  G  +A  E   GI TP DEFQ+WA   G+S +R + R  A N    F+PI   +   DS+   +  ELV+ T   +DD+WK                 A YP+ RM+ LMD +G AL R +Q++L++  LW  PF  V   + A  AV E+W    E LT   W RY  HPW+GD H     + +  R EEV
Sbjct:    7 DIRKRFILTTTANYFGLKPSSA-LSGGRELDNFLDDGNE-FVLAIIKNGKDLQLSNRIE-----SGDSNEKVLVFFKLRPSVITEENLHQNVLVSSMLESPISTLYQAVRQVFAPVLLKDEKWSKSFDPKLQSLLSDLESGLGSVVRQSNPSNSGKQSAKEEDVLGILTPGDEFQYWADV-GQSAERASARDRAANFVELFKPIEKDYNNLDSVALPDAMELVDLTRDTVDDVWK-------------QGDHAPYPETRMQRLMDVIGGALGRYVQRKLSSLKLWEDPFLSVRESVRAGMAVCEQWASTCEHLTGHVWKRYSPHPWKGDKHRPQSLSCLAHRLEEV 331          
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Match: UPI0020151DA1 (LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Alosa alosa TaxID=278164 RepID=UPI0020151DA1)

HSP 1 Score: 182 bits (462), Expect = 6.530e-47
Identity = 124/346 (35.84%), Postives = 182/346 (52.60%), Query Frame = 3
Query:  141 DLREDFVADVIADLTEGKNSQANVRGAVELRSFFDDPDTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDNIRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVELDTLLATAVRGGSGSAKGN-AADLESTGGITTPTDEFQFWATYSGRSVDREALR--AIN--NAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGXXXXXXXXXXXXXAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDVGAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRRFEEV 1163
            D+R+ F+    A+    K S A + G  EL +F DD +  F+ A+++    ++L NR++     S +S E  + F KLRP  IT +N+ +NV V SM  SP+ +LY ++  V+APVLL+          K Q+L+ +L++ L + VR  + S  G  +A  E   GI TP DEFQ+WA   G+S +R + R  A N    F+PI   +   DS+   +  ELV+ T   +DD+WK                 A YP+ RM+ LMD +G AL R +Q++L++  LW  PF  V   + A  AV E+W    E LT   W RY  HPW+GD H     + +  R EEV
Sbjct:    7 DIRKRFILTTTANYFGLKPSSA-LSGGRELDNFLDDGNE-FVLAIIKNGKDLQLSNRIE-----SGDSNEKVLVFFKLRPSVITEENLHQNVLVSSMLESPISTLYQAVRQVFAPVLLKDEKWSKSFDPKLQSLLSDLESGLGSVVRQSNPSNSGKQSAKEEDVLGILTPGDEFQYWADV-GQSAERASARDRAANFVELFKPIEKDYNNLDSVALPDAMELVDLTRDTVDDVWK-------------QGDHAPYPETRMQRLMDVIGGALGRYVQRKLSSLKLWEDPFLSVRESVRAGMAVCEQWASTCEHLTGHVWKRYSPHPWKGDKHRPQSLSCLAHRLEEV 331          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6662.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN03_ECTSI4.230e-8143.63Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
C3XXR3_BRAFL2.680e-5336.72DHC_N1 domain-containing protein n=1 Tax=Branchios... [more]
A0A1S3I1P2_LINUN4.330e-5235.24cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Lingula... [more]
A0A1S3JIZ4_LINUN4.440e-5235.24Cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Lingula... [more]
A0A6P4Y869_BRABE3.660e-4935.53Cytoplasmic dynein 2 heavy chain 1 n=3 Tax=Branchi... [more]
A7SBE7_NEMVE1.050e-4734.75Cytoplasmic dynein 2 heavy chain 1 n=4 Tax=Nematos... [more]
UPI00077A72261.380e-4734.19LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy ch... [more]
UPI00065B97ED4.490e-4734.38cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Aplysia... [more]
UPI001C089F906.510e-4735.84cytoplasmic dynein 2 heavy chain 1 n=1 Tax=Alosa s... [more]
UPI0020151DA16.530e-4735.84LOW QUALITY PROTEIN: cytoplasmic dynein 2 heavy ch... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6662contigP-wetherbeei_contig6662:295..2182 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7739.XP_002611513.1
PFAMsDHC_N1
Model size1163
Max annot lvl33208|Metazoa
KEGG koko:K10414
KEGG Pathwayko04145,ko04962,ko05132,map04145,map04962,map05132
Hectar predicted targeting categoryother localisation
Exons5
Evalue1.68e-54
EggNOG OGsCOG5245@1|root,KOG3595@2759|Eukaryota,39XWA@33154|Opisthokonta,3BGHA@33208|Metazoa,3D1TH@33213|Bilateria,48AQV@7711|Chordata
DescriptionDynein heavy chain, N-terminal region 1
Cds size1062
COG categoryZ
BRITEko00000,ko00001,ko03036,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6662.1.1prot_P-wetherbeei_contig6662.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6662 295..2081 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186928.4499483-CDS-P-wetherbeei_contig6662:294..6781683186928.4499483-CDS-P-wetherbeei_contig6662:294..678Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6662 295..678 -
1683186928.4650273-CDS-P-wetherbeei_contig6662:909..10371683186928.4650273-CDS-P-wetherbeei_contig6662:909..1037Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6662 910..1037 -
1683186928.4756088-CDS-P-wetherbeei_contig6662:1204..14361683186928.4756088-CDS-P-wetherbeei_contig6662:1204..1436Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6662 1205..1436 -
1683186928.4868517-CDS-P-wetherbeei_contig6662:1617..18421683186928.4868517-CDS-P-wetherbeei_contig6662:1617..1842Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6662 1618..1842 -
1683186928.4963098-CDS-P-wetherbeei_contig6662:1988..20811683186928.4963098-CDS-P-wetherbeei_contig6662:1988..2081Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6662 1989..2081 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186928.5059078-UTR-P-wetherbeei_contig6662:2081..21821683186928.5059078-UTR-P-wetherbeei_contig6662:2081..2182Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6662 2082..2182 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6662.1.1

>prot_P-wetherbeei_contig6662.1.1 ID=prot_P-wetherbeei_contig6662.1.1|Name=mRNA_P-wetherbeei_contig6662.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=354bp
MPDPPKGVLGTEPDLREDFVADVIADLTEGKNSQANVRGAVELRSFFDDP
DTPFLHALVQKDGTVRLVNRLDEQCLASFESAEGGVSFLKLRPEPITGDN
IRKNVQVCSMPGSPLDSLYHSLHSVYAPVLLRSAASQARLSGKGQTLIVE
LDTLLATAVRGGSGSAKGNAADLESTGGITTPTDEFQFWATYSGRSVDRE
ALRAINNAFEPIRAGFATPDSLQTSEMEELVEATHTALDDIWKVERGGGG
GGGNDRGGGGAVYPQVRMEHLMDTVGAALCRTLQKRLAASDLWTGPFSDV
GAKLAAAAAVLERWNHAVEQLTTTFWPRYMGHPWEGDGHTDAFTAGVKRR
FEEV
back to top

mRNA from alignment at P-wetherbeei_contig6662:295..2182-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6662.1.1 ID=mRNA_P-wetherbeei_contig6662.1.1|Name=mRNA_P-wetherbeei_contig6662.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1888bp|location=Sequence derived from alignment at P-wetherbeei_contig6662:295..2182- (Phaeothamnion wetherbeei SAG_119_79)
TACTGGACGGTGGGTTCGCCGAATGGCATCTCGGATCACCTGACGCGTGG CTGTCTGCGACCTCATCGCTTTGCAGCGTCGCGAAGCGCCAGTAGGGACC CATGCCGGACCCCCCCAAAGGCGTGCTTGGAACCGAGCCGGACCTACGCG AAGATTTTGTGGCGGATGTCATCGCCGACCTCACAGAGGGCAAGGTCAGT TGTTGCGTTCTCCCGGTCCACGGGCTAACGAATTGCCAGTTACTCTTAAT CGCCCTATTCCACTTTTTGAGGACTTGTACGCTGTTTAACCTGTACCGAG CTGCCATTCTTCCTCTTACCCCCGGCAAACATCTGTGCAGAACTCACAGG CCAACGTTCGTGGTGCTGTAGAGCTCCGCTCCTTCTTTGATGACCCCGAC ACGCCGTTTCTGCACGCGTTGGTGCAAAAAGACGGCACTGTGCGACTTGT GAATCGGCTCGACGAACAATGCCTTGCGAGCTTCGAATCAGCCGAGGGAG GTGTTAGCTTCTTGAAGCTGCGCCCGGAACCGATAACGGGCGACAACATC AGGAAAAACGTCCAGGTTTGTGTGGCGCTTGGCACGTGGGTTCAGATGCA CCTATGCTTCTCGTCTCATGAAAGCGAGGCTAGTCAGCATTGTGACCAGT TCTCTTTAACAATACACCGCAGGCTGTTTATTTAACCGCTTAATATCCTC TTGCTCACTCTGCTTTGTCTATCTTTCCGAATCCTTTCCTGGTCAGGTGT GCTCGATGCCGGGCTCGCCGCTCGACAGCCTCTACCACTCGTTGCACTCT GTCTACGCCCCCGTATTGCTGCGCAGCGCCGCGTCGCAAGCGCGGCTCAG CGGCAAGGGCCAGACCCTCATCGTGGAGCTCGACACGCTGCTGGCCACTG CCGTGCGCGGCGGGAGTGGCAGTGCCAAGGGCAACGCCGCGGACCTGGAG TCCACCGGAGGCATTACGACGCCCACGGGTATGTTTTCTTCTGTTATGTT TTAGAAGTCCTTTTGACTTAATGCACTTGGGTTTCTGTACGTGGCGAGGG CCATTTCGCCCCCATAGCCTTCCTGTGCACTTTAGAGTAACATAACACGG CTCTTCTCTCCATCTCAATTTTTCAAAAATACCGCTCTCGAGTAGACGAG TTCCAATTTTGGGCGACGTATTCTGGACGGTCCGTCGATCGAGAGGCCCT TCGCGCAATCAACAACGCCTTCGAGCCCATCCGCGCCGGTTTCGCCACTC CCGACTCGCTCCAAACGAGCGAGGTGAGATGGAGACACAATCGCCGTACC TCACTGAATCGCATTTTTATGCTTTTCGTCCCTCCTTCGCCCTCTCTTCT TTCTGATTCCTTTGCCGAAGCATGCACAGATTACTCCCTCGCCTTGGCCA TGTTTCTACGTCTACGTCGGAAGAAAGTGAACTGCATTTTCCTTTCTGCG CCGTTCATCCTACCTGTCGCATCTCCCATAACTTCCCATTCATCTTCTCA AAAGATGGAGGAGCTGGTTGAGGCAACCCACACGGCGCTGGATGACATCT GGAAAGTGGAACGCGGCGGCGGTGGCGGCGGCGGCAACGACCGAGGCGGC GGCGGTGCTGTCTACCCGCAGGTCCGCATGGAACACCTGATGGACACGGT CGGCGCTGCCCTCTGCCGGACGCTGCAGAAGCGGCTGGCCGCATCCGACC TCTGGACGGGGCCCTTTTCGGACGTCGGCGCCAAGCTGGCGGCGGCCGCC GCAGTTCTGGAGCGGTGGAATCACGCGGTGGAACAGCTGACGACGACCTT CTGGCCGCGCTATATGGGGCACCCGTGGGAGGGCGACGGCCACACCGATG CCTTCACAGCCGGCGTCAAGCGGCGCTTCGAAGAGGTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6662:295..2182-

>mRNA_P-wetherbeei_contig6662.1.1 ID=mRNA_P-wetherbeei_contig6662.1.1|Name=mRNA_P-wetherbeei_contig6662.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1062bp|location=Sequence derived from alignment at P-wetherbeei_contig6662:295..2182- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGACCCCCCCAAAGGCGTGCTTGGAACCGAGCCGGACCTACGCGA
AGATTTTGTGGCGGATGTCATCGCCGACCTCACAGAGGGCAAGAACTCAC
AGGCCAACGTTCGTGGTGCTGTAGAGCTCCGCTCCTTCTTTGATGACCCC
GACACGCCGTTTCTGCACGCGTTGGTGCAAAAAGACGGCACTGTGCGACT
TGTGAATCGGCTCGACGAACAATGCCTTGCGAGCTTCGAATCAGCCGAGG
GAGGTGTTAGCTTCTTGAAGCTGCGCCCGGAACCGATAACGGGCGACAAC
ATCAGGAAAAACGTCCAGGTGTGCTCGATGCCGGGCTCGCCGCTCGACAG
CCTCTACCACTCGTTGCACTCTGTCTACGCCCCCGTATTGCTGCGCAGCG
CCGCGTCGCAAGCGCGGCTCAGCGGCAAGGGCCAGACCCTCATCGTGGAG
CTCGACACGCTGCTGGCCACTGCCGTGCGCGGCGGGAGTGGCAGTGCCAA
GGGCAACGCCGCGGACCTGGAGTCCACCGGAGGCATTACGACGCCCACGG
ACGAGTTCCAATTTTGGGCGACGTATTCTGGACGGTCCGTCGATCGAGAG
GCCCTTCGCGCAATCAACAACGCCTTCGAGCCCATCCGCGCCGGTTTCGC
CACTCCCGACTCGCTCCAAACGAGCGAGATGGAGGAGCTGGTTGAGGCAA
CCCACACGGCGCTGGATGACATCTGGAAAGTGGAACGCGGCGGCGGTGGC
GGCGGCGGCAACGACCGAGGCGGCGGCGGTGCTGTCTACCCGCAGGTCCG
CATGGAACACCTGATGGACACGGTCGGCGCTGCCCTCTGCCGGACGCTGC
AGAAGCGGCTGGCCGCATCCGACCTCTGGACGGGGCCCTTTTCGGACGTC
GGCGCCAAGCTGGCGGCGGCCGCCGCAGTTCTGGAGCGGTGGAATCACGC
GGTGGAACAGCTGACGACGACCTTCTGGCCGCGCTATATGGGGCACCCGT
GGGAGGGCGACGGCCACACCGATGCCTTCACAGCCGGCGTCAAGCGGCGC
TTCGAAGAGGTG
back to top