mRNA_P-wetherbeei_contig12757.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig12757.1.2
Unique NamemRNA_P-wetherbeei_contig12757.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A835Z2E3_9STRA (Kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2E3_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.620e-66
Identity = 146/353 (41.36%), Postives = 182/353 (51.56%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXD-------------------------------------------------AEGXXXXXXXXXXXXA----FMRKLWRKFLGRYSQELSAQWDGR---------------------------------------------VRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVI--TRTPCKFYSSSLLLIYDG 759
            FD QVSGHMPL+T+G G+IGKPA+P+EV FYE VL R P+LR + PNY GCVD+ IA     G+          D                                                  EG  XXXXXXXXXX        K+W KFL RY +ELS +W+G                                              VRF+MLEDLT PFR+G  CILD+K+GTRQ+R GATPEK  RQ +K R++T+   GLRLNGM+VW + +G Y++ DKYWGR++QADT+  +  +FF +G  LR  VI  LL LL  LA  I    + C+FYSSS+LLIYDG
Sbjct:   35 FDSQVSGHMPLITSGCGRIGKPAVPQEVAFYEVVLARHPRLRPFAPNYLGCVDMSIADIEAMGAEAVLSCDDDDDDIDASDEAADAASENLWSIDMEGECHRGGDAVPSRRRSLRRXXXXXXXEGEGRGXXXXXXXXXXXDNAELKAKMWAKFLKRYCRELSTRWEGSGARRGLPACARNGAGGTASVCGVAANHAAMAAGSAMGAGDAAAATVRFMMLEDLTFPFRSGRACILDVKLGTRQYRAGATPEKEQRQRLKSRTTTTGQFGLRLNGMRVWHKPSGAYVVRDKYWGRSIQADTLEAAVTEFFHNGETLRADVIPPLLRLLASLASAIEAASSACRFYSSSVLLIYDG 387          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A7S2XWJ5_9STRA (Kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWJ5_9STRA)

HSP 1 Score: 185 bits (469), Expect = 4.600e-54
Identity = 99/243 (40.74%), Postives = 134/243 (55.14%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDAEGXXXXXXXXXXXXAFMRKLWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTPCKFY 729
            FD+QV G MP ++TG+G++GKPA+  EV+FYE +  RFP L  WVP + G  D++                   D+                  K   KF  +  Q    + DG+ +F++LEDLT+PFR   PCILDIKMGTRQHR G    K  RQ  KCR +TS++LG RL GMQVW+     Y+  DKYWGR++ A++I E    FF +G  +R   I  L+  L ++   I  TPC+FY
Sbjct:   54 FDNQVGGQMPFISTGSGQVGKPAVLTEVLFYERMKERFPSLTLWVPKFLGSFDIDTKE--------IFSLHGQLDSCKTPLPNSMSTSFVPIQSKRLEKFSTK--QNNLVRNDGKCKFLLLEDLTYPFRGKKPCILDIKMGTRQHRPGVCRHKARRQTEKCRKTTSSSLGFRLCGMQVWRTDQASYITRDKYWGRSLAAESIREGLSYFFNNGHGVRTRTISALVDRLNEMKRTIVETPCQFY 286          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A485K8E5_9STRA (Kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K8E5_9STRA)

HSP 1 Score: 168 bits (426), Expect = 7.160e-47
Identity = 100/263 (38.02%), Postives = 144/263 (54.75%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRS-----GAGSGXXXXXXXXXDAEGXXXXXXXXXXXXA----FMRKLWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTP-CKFYSSSLLLIYDG 759
            F HQV GH P+L +  G+I KPA+P E+ FY+ + P +PQL  +VP Y G + +++ P       GAG           + +G            +    F   LW K +   S  L         +++L DLT  F    PCILDIKMGTRQH   A+P+KV   + KC+++TSA+LG RL GMQ++Q A G+Y++ DK+WGRT++   I  + + F   G  LR   ++ LL  LR L  VI  T   +F+ +SLLL+Y+G
Sbjct:   49 FKHQVGGHKPILRSAPGEICKPAIPVELHFYQALAPTYPQLIAYVPTYLGTIVVDLQPSGSSMDDGAGGDDIPAAPRQNEGKGMKKVPSMRRASRSVDLSFSHALWNKDIQERSSFLC-------EYLVLGDLTQGFVR--PCILDIKMGTRQHGQHASPQKVRSHSAKCKATTSASLGFRLCGMQIFQPADGRYVLRDKHWGRTLKVGDIKPALQFFLSTGDSLRIDAVKVLLTRLRALQGVIQNTTGIRFWGASLLLVYEG 302          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A1V9ZZA6_9STRA (Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZA6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 2.130e-44
Identity = 91/256 (35.55%), Postives = 141/256 (55.08%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDAEGXXXXXXXXXXXXAFMRKLWRKFLGRYSQELSAQWDGRV--RFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLAD-VITRTPCKFYSSSLLLIYDG 759
            F HQV GH P L +  G++ KPA+P E+ FY+ +  +FP L+ +VP Y+G + +++ P S                              +F   LW K  G+ + E   +    +  ++++L DLT  +    PC+LDIKMGTRQH   AT +K+ R   KC S+TSA LGLRL GMQ++++  G+Y++ DK+WGR ++A  I  +   F  +G  +R   I+ LL  L  L + +I+    +F+ SSLLL+Y+G
Sbjct:   32 FSHQVGGHKPFLRSAPGEVCKPAIPLELAFYKALDIQFPHLKEFVPVYKGTLVVDLQPCS----------CDDESKSKYSNRKASRSLDMSFSYSLWNKECGKSNVETYNEPSQTILCKYLVLGDLTQGYNR--PCVLDIKMGTRQHGEDATEDKILRHTQKCNSTTSAELGLRLCGMQIYRQCDGRYVLRDKHWGRKLRASDIEPALLFFLSNGQHVRTDAIQALLQRLNKLKEQIISTIGIRFWGSSLLLVYEG 275          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A067BYK0_SAPPC (Kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BYK0_SAPPC)

HSP 1 Score: 161 bits (407), Expect = 3.460e-44
Identity = 93/256 (36.33%), Postives = 138/256 (53.91%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDAEGXXXXXXXXXXXXAFMRKLWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGY--PCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTP-CKFYSSSLLLIYDG 759
            F+HQV GH P L +  G++ KPA+P E+ FY  +  RFPQL  +VP Y G + +++ P S   S            +             +    LW K +G+  +E          +++L DLT    +GY  PC+LDIKMGTRQH   A+ EK     +KC ++TSA LGLRL GMQ++++   +Y++ DK+WGR + A  I  +   F  +G  +R+  +  LL  L  L DVI  T   +F+ +SLLL+Y+G
Sbjct:   38 FNHQVGGHKPFLRSAPGEVCKPAIPLELAFYRALSGRFPQLEPFVPAYLGTITVDLQPHSDKASKPVTGRKSSKSVD------------TSVSYSLWNKEVGKTIEEDDVTPSFLCEYLVLGDLT----SGYTRPCVLDIKMGTRQHGEDASEEKARSHTLKCAATTSAELGLRLCGMQIYRQCDSRYVLRDKHWGRRLHASDIEPALLFFVSNGEVVRQDAVAGLLQRLHALKDVIAATDGIRFWGASLLLVYEG 277          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A6G0WAB9_9STRA (Kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAB9_9STRA)

HSP 1 Score: 161 bits (407), Expect = 4.290e-44
Identity = 94/256 (36.72%), Postives = 136/256 (53.12%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDAEGXXXXXXXXXXXX--AFMRKLWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVI-TRTPCKFYSSSLLLIYDG 759
            F HQV GH PLL +  G++ KPA+P E+ FY+ + P++PQL  +VP Y G + +++ P S + +G           +                    LW K       E+         +++L DLT  +    PCILDIKMGTRQH   A+PEK      KC ++TSA+LG RL GMQ++Q A G++++ DK+WGR ++ D I  +   F   G  LR   +  LL  L +L  VI T T  +F+ +SLLL Y+G
Sbjct:   44 FKHQVGGHKPLLRSAPGEVCKPAIPSELQFYQALAPKYPQLIEFVPPYIGTIVVDLQPSSSSSTGSDDMDTSLAKQQSMKYSSRRSSRSLDLGVSYTLWNK-------EVRDNRSFLCEYLVLGDLTQGYTR--PCILDIKMGTRQHGANASPEKALSHTRKCAATTSASLGFRLCGMQIYQPADGRFVLRDKHWGRLLRPDDIEPALLFFLSTGDSLRFDAVSALLVRLGELQAVIQTTTGIRFWGASLLLTYEG 290          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A024TFQ6_9STRA (Kinase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TFQ6_9STRA)

HSP 1 Score: 161 bits (407), Expect = 5.290e-44
Identity = 96/257 (37.35%), Postives = 138/257 (53.70%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDA---EGXXXXXXXXXXXXAFMRKLWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTP-CKFYSSSLLLIYDG 759
            + HQV GH PLL +  G++ KPALP E+ FY+G+   +PQL  +VP Y G + +++ P SG  +           +   +             +    LW K L R       +      +I+L DLT  +    PC+LDIKMGTRQH   A PEK     +KC ++TSA LG RL GMQ++ +A G+Y++ DK+WGR +Q   I  + + F   G  LR   + +L A LRDL  VI  T   +F+ +SLLL+Y+G
Sbjct:   52 YKHQVGGHKPLLRSAPGEVCKPALPHELQFYQGLESTYPQLIPFVPAYLGTIVVDLHPSSGDDAADRTTSDIASSSTASKSASRRPSRSLEHRSISLILWNKELVRDHASFLCE------YIVLGDLTQGYMR--PCVLDIKMGTRQHGADAPPEKARSHALKCATTTSATLGFRLCGMQIYNQAEGRYVLRDKHWGRLLQPADILPALRFFLSAGDVLRINAVVQLAARLRDLQAVIQHTSGIRFWGASLLLVYEG 300          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A7S2UZF0_9STRA (Kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZF0_9STRA)

HSP 1 Score: 154 bits (390), Expect = 7.390e-43
Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 1
Query:  340 GRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTPCKFYSSSLLLIYDG 759
            G+ +FI+LEDLTH F A  PCILD+KMGTRQH  GA   K  RQ  KCRSSTSA LG R NGM+VW+     +   DKYWGR++++  + ES   FF +G  LR+G I   +  L +L   I +TPC+FY++SLLLIY+G
Sbjct:   20 GKCKFILLEDLTHQFNAKKPCILDLKMGTRQHGPGACSRKAKRQTQKCRSSTSATLGFRFNGMKVWKENLSSFESKDKYWGRSLRSHDVLESLCFFFDNGQGLRKGAIMAFIDRLTELRGTIRKTPCQFYATSLLLIYNG 159          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: A0A067CSK0_SAPPC (Kinase n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CSK0_SAPPC)

HSP 1 Score: 160 bits (404), Expect = 8.240e-43
Identity = 92/256 (35.94%), Postives = 138/256 (53.91%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDAEGXXXXXXXXXXXXAFMRKLWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGY--PCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTP-CKFYSSSLLLIYDG 759
            F+HQV GH P L +  G++ KPA+P E+ FY  +  RFPQL  +VP Y G + +++ P S   S            +             +    LW K +G+  ++          +++L DLT    +GY  PC+LDIKMGTRQH   A+ EK     +KC ++TSA LGLRL GMQ++++   +Y++ DK+WGR + A  I  +   F  +G  +R+  +  LL  L  L DVI  T   +F+ +SLLL+Y+G
Sbjct:  138 FNHQVGGHKPFLRSAPGEVCKPAIPLELAFYRALSGRFPQLEPFVPAYLGTITVDLQPHSDKASKPGTGRKSSKSVD------------TSVSYSLWNKEVGKTVEDDDVAPSFLCEYLVLGDLT----SGYTRPCVLDIKMGTRQHGEDASEEKARSHTLKCAATTSAELGLRLCGMQIYRQCDSRYVLRDKHWGRRLHASDIEPALLFFVSNGEVVRQDAVAGLLQRLHALKDVIAATDGIRFWGASLLLVYEG 377          
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Match: W4FEM1_9STRA (Kinase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEM1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 3.370e-42
Identity = 93/261 (35.63%), Postives = 135/261 (51.72%), Query Frame = 1
Query:    1 FDHQVSGHMPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAPRSGAGSGXXXXXXXXXDAEGXXXXXXXXXXXXAFMRK-------LWRKFLGRYSQELSAQWDGRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQNMKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQFFCDGPRLRRGVIRRLLALLRDLADVITRTP-CKFYSSSLLLIYDG 759
            + HQV GH PLL +  G++ KPALP E+ FY+G+   +PQL  +VP Y G + +++ P S               A              +           LW K + R       +      +++L DLT  +    PC+LDIKMGTRQH   A+P K    ++KC  +TSA LG RL GMQ++Q A G+Y++ DK+WGR +Q   I  +   F   G  LR   + +L + LR+L  VI RT   +F+ +SLLL+Y+G
Sbjct:   56 YKHQVGGHKPLLRSAPGEVCKPALPLELQFYQGLASTYPQLIPFVPTYLGTIVVDLHPSSNGSDNVADRTNSDSVASTKSSSTSNATRRPSRSMDHRGVSLILWNKEIVRDQSSFLCE------YLVLGDLTQGYTR--PCVLDIKMGTRQHGADASPAKARSHSVKCAKTTSATLGFRLCGMQIYQPADGRYVLRDKHWGRLLQPGDIPPALHFFLSTGDALRIDAVEQLASRLRELQAVIERTTGIRFWGASLLLVYEG 308          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12757.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2E3_9STRA4.620e-6641.36Kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
A0A7S2XWJ5_9STRA4.600e-5440.74Kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxI... [more]
A0A485K8E5_9STRA7.160e-4738.02Kinase n=1 Tax=Aphanomyces stellatus TaxID=120398 ... [more]
A0A1V9ZZA6_9STRA2.130e-4435.55Kinase n=1 Tax=Thraustotheca clavata TaxID=74557 R... [more]
A0A067BYK0_SAPPC3.460e-4436.33Kinase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067... [more]
A0A6G0WAB9_9STRA4.290e-4436.72Kinase n=1 Tax=Aphanomyces euteiches TaxID=100861 ... [more]
A0A024TFQ6_9STRA5.290e-4437.35Kinase n=1 Tax=Aphanomyces invadans TaxID=157072 R... [more]
A0A7S2UZF0_9STRA7.390e-4352.86Kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 Rep... [more]
A0A067CSK0_SAPPC8.240e-4335.94Kinase n=1 Tax=Saprolegnia parasitica (strain CBS ... [more]
W4FEM1_9STRA3.370e-4235.63Kinase n=2 Tax=Aphanomyces astaci TaxID=112090 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12757contigP-wetherbeei_contig12757:190..1758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog36331.EPrPI00000013432
PFAMsIPK
Model size768
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.62e-40
EggNOG OGsKOG1620@1|root,KOG1620@2759|Eukaryota,1MDH3@121069|Pythiales
Descriptionkinase 1. Source PGD
Cds size744
COG categoryIKT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185960.0981574-CDS-P-wetherbeei_contig12757:189..3631683185960.0981574-CDS-P-wetherbeei_contig12757:189..363Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12757 190..363 -
1683185960.106419-CDS-P-wetherbeei_contig12757:723..11471683185960.106419-CDS-P-wetherbeei_contig12757:723..1147Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12757 724..1147 -
1683185960.1142359-CDS-P-wetherbeei_contig12757:1399..15151683185960.1142359-CDS-P-wetherbeei_contig12757:1399..1515Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12757 1400..1515 -
1683185960.1221185-CDS-P-wetherbeei_contig12757:1704..17341683185960.1221185-CDS-P-wetherbeei_contig12757:1704..1734Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig12757 1705..1734 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185960.129564-UTR-P-wetherbeei_contig12757:1734..17581683185960.129564-UTR-P-wetherbeei_contig12757:1734..1758Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig12757 1735..1758 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12757.1.2prot_P-wetherbeei_contig12757.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig12757 190..1734 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig12757.1.2

>prot_P-wetherbeei_contig12757.1.2 ID=prot_P-wetherbeei_contig12757.1.2|Name=mRNA_P-wetherbeei_contig12757.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp
MPLLTTGNGKIGKPALPEEVVFYEGVLPRFPQLRRWVPNYEGCVDLEIAP
RSGAGSGGGGGGGGAGDAEGGAASGGGSSGGGAFMRKLWRKFLGRYSQEL
SAQWDGRVRFIMLEDLTHPFRAGYPCILDIKMGTRQHRTGATPEKVARQN
MKCRSSTSAALGLRLNGMQVWQRATGQYLINDKYWGRTVQADTIAESFKQ
FFCDGPRLRRGVIRRLLALLRDLADVITRTPCKFYSSSLLLIYDGVGP
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mRNA from alignment at P-wetherbeei_contig12757:190..1758-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig12757.1.2 ID=mRNA_P-wetherbeei_contig12757.1.2|Name=mRNA_P-wetherbeei_contig12757.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1569bp|location=Sequence derived from alignment at P-wetherbeei_contig12757:190..1758- (Phaeothamnion wetherbeei SAG_119_79)
TTTGATCATCAAGTTAGCGGCCACATGCCGCTCCTGACTACGGGGAATGG CAAGGTGATGTTTATTCTCGTCTCGCCCTTTCAGCTTCCTGAATGTTCGT TGGTGTTTTGTTGGAATAGGCAATTGGAGCTCCCCCCTTACTTTTGACAA CTCTGAACTCAGTTGCTACTTAACACGCGGTCGAAGCTTCCGGTTTTGCT GATCTGTTTGCGTTCTATTATTTTCCTTTCCGTGGAGCACCAGATCGGCA AGCCGGCGCTTCCCGAAGAAGTGGTTTTCTACGAGGGCGTCCTCCCCAGA TTCCCGCAGCTTCGGCGGTGGGTGCCGAATTATGAAGGTTGCGTGGACCT CGAAATCGCGTCGTTGCGCGCCCTTGGCCGGGCAGCGCAAAAGGACGGGA AGGGCGGCGCCGAAAGCGCGGGCTGCGTGACGCCTCGCGGCATGCCCGAG ATGCAGATGTGGCCGATGGATGGCGTCGAGCCGATGGGTACGCCCGGCGG CACAACCGGCGCTGCTGGTAGGAGCGGAGGTCGCGACAGTGGCTGCGGCG CCGGCGGCGGTGGCGATGAGGAGGACCTCGACATGCCGCGCGAGGCCCGT TGGACAAGCAGCCCGCGATCCGGCGCGGGCAGTGGCGGCGGCGGCGGCGG CGGGGGCGCCGGCGATGCGGAGGGCGGAGCAGCCAGCGGCGGTGGCAGCA GCGGCGGCGGCGCCTTCATGCGCAAGCTGTGGCGCAAGTTCCTGGGGCGC TACAGCCAGGAGCTGAGCGCCCAGTGGGACGGGCGCGTCCGTTTCATCAT GCTGGAGGACCTAACGCATCCTTTCCGCGCCGGCTACCCATGCATCCTCG ACATTAAGATGGGCACGCGGCAGCACCGGACGGGCGCCACCCCGGAGAAG GTGGCGCGGCAGAACATGAAGTGCCGCAGCTCGACGAGCGCGGCGCTCGG GCTGCGCCTCAACGGGATGCAGGTGTGGCAGCGTGCCACCGGCCAGTACC TCATTAACGATAAGTACTGGGGAAGGACCGTGCAGGTGAGGAGAAGAAAG AGAAGAAACACATCTTTGTGCCGCGCCTAAAGAGCTGCTTTTGCCCGGCG AACGAAGCGGTTTCCCTGGCTACCCTTCAAGTACGTTTGTAGAAAGATGA CAAGTTCTAGTAGTTAATTTAGAATAGTAGTTTATTTAGACCAGGCACAT CAAAGCGAATTTATGGTACTGGCTTCTCATTTGCAGCTAGAGCATCCATT GTGTTCGCATTCTGAATGAACCGCTCCTTGCTTCCCCTGTTGCTTACCCG CCGCTTGAACCTTTATTGTGTCCGCCCTCTTGACAAATCCGCTGCGGCTT GGCGCTTCCCTCTTTCTTATCCCTTCCCTGGCTTTTCCGCTGCAGGCGGA CACGATTGCGGAGTCGTTCAAGCAGTTCTTCTGCGACGGCCCCCGGCTGC GGCGCGGCGTCATTCGGCGGCTGCTGGCGCTGCTGCGGGACCTCGCCGAC GTCATCACTCGGACGCCCTGCAAGTTCTATTCCTCCTCGCTCCTCCTCAT TTACGACGGTGTCGGCCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig12757:190..1758-

>mRNA_P-wetherbeei_contig12757.1.2 ID=mRNA_P-wetherbeei_contig12757.1.2|Name=mRNA_P-wetherbeei_contig12757.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig12757:190..1758- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCTCCTGACTACGGGGAATGGCAAGATCGGCAAGCCGGCGCTTCC
CGAAGAAGTGGTTTTCTACGAGGGCGTCCTCCCCAGATTCCCGCAGCTTC
GGCGGTGGGTGCCGAATTATGAAGGTTGCGTGGACCTCGAAATCGCCCCG
CGATCCGGCGCGGGCAGTGGCGGCGGCGGCGGCGGCGGGGGCGCCGGCGA
TGCGGAGGGCGGAGCAGCCAGCGGCGGTGGCAGCAGCGGCGGCGGCGCCT
TCATGCGCAAGCTGTGGCGCAAGTTCCTGGGGCGCTACAGCCAGGAGCTG
AGCGCCCAGTGGGACGGGCGCGTCCGTTTCATCATGCTGGAGGACCTAAC
GCATCCTTTCCGCGCCGGCTACCCATGCATCCTCGACATTAAGATGGGCA
CGCGGCAGCACCGGACGGGCGCCACCCCGGAGAAGGTGGCGCGGCAGAAC
ATGAAGTGCCGCAGCTCGACGAGCGCGGCGCTCGGGCTGCGCCTCAACGG
GATGCAGGTGTGGCAGCGTGCCACCGGCCAGTACCTCATTAACGATAAGT
ACTGGGGAAGGACCGTGCAGGCGGACACGATTGCGGAGTCGTTCAAGCAG
TTCTTCTGCGACGGCCCCCGGCTGCGGCGCGGCGTCATTCGGCGGCTGCT
GGCGCTGCTGCGGGACCTCGCCGACGTCATCACTCGGACGCCCTGCAAGT
TCTATTCCTCCTCGCTCCTCCTCATTTACGACGGTGTCGGCCCG
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