mRNA_P-wetherbeei_contig6652.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: D8LFT7_ECTSI (Plastid phosphoglycerate mutase protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT7_ECTSI) HSP 1 Score: 155 bits (392), Expect = 4.240e-41 Identity = 92/241 (38.17%), Postives = 128/241 (53.11%), Query Frame = 1
Query: 13 MRSFILVRHGQSVFNAQGRLQGSLRHPRLTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVL-ILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWLYPVTTEFVNAASMSR 732
+ SF L+RHGQ+ FNA GR+QG+L LT G QA E G LA+ ++LGP SP+ RAQ+T E ++ S+ + E + I+ + EI L+ W+G+ K +I +PE Y W DP+NF+ G +P RDLW RA AW+ + L Q LVV H + Q+LL TA D + F K W N LE+ W RR A ++RW+ P + FV AA +R
Sbjct: 81 LESFFLLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSEISKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSI----QDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQW---------RRGEARAERYRWVVPEASGFVEAADAAR 308
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A812MB86_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MB86_9DINO) HSP 1 Score: 135 bits (341), Expect = 2.260e-34 Identity = 83/223 (37.22%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRHPR-LTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWL 687
F+LVRHGQ+ FNA+ R QGS+ LT G QA+E G L +P+ + F SPL RA++T E +A + + P L+ L EI LY W+GR + EI AE PE RLW+ + N + G + VRDLW R+ AW M ++ R LVV H ++++L+ TA E F +NG +E+ WSG E + R+ + WR L
Sbjct: 22 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKGNPVAAV----FVSPLLRARQTLE---VARTVAGEVLPPTETKLSELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAPSGEERS-----LVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGS--EAKWRKLHPDKGPWRCL 230
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A813LJ98_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LJ98_POLGL) HSP 1 Score: 134 bits (338), Expect = 1.510e-33 Identity = 90/233 (38.63%), Postives = 119/233 (51.07%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRH-PRLTNLGKQQAQECGAALA-------ASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPV-RDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEA--RRFYGSACQWRWL 687
F+L RHGQ+ FNA R QGS+ P LT G QA+E G L+ S +G L F SPLRRA++T + +A + + + P E +L L EI LY WEGR + E+ A+SPE +RLW+T LGG PV DLW RA AW M + P+ LVV H + ++LL TA +F F NG +E+ W G + A RR + WR L
Sbjct: 48 FLLARHGQTTFNAAKRFQGSMNEEPVLTEKGVAQARELGDWLSRRFCPDETSADRQIGSL-FVSPLRRARQTLD---VARKVASEVLPAEAAVLPELREIDLYEWEGRTQAEVNADSPELFRLWKTAAWELRLGGGRPVVLDLWERAASAWGLMRQAASASNREGPS---LVVAHGTLGKALLGTALGLPAQAFRHFTLQNGEVVEVAWPETGSDQGALWRRRHPETGPWRSL 273
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A812LVJ0_9DINO (NEK1 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812LVJ0_9DINO) HSP 1 Score: 134 bits (338), Expect = 5.210e-32 Identity = 84/223 (37.67%), Postives = 119/223 (53.36%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRHPR-LTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWL 687
F+LVRHGQ+ FNA+ R QGS+ LT G QA+E G L +P+ + F SPL RA++T E +A + + P L+ L EI LY W+GR + EI AE PE RLW+ + N + G + VRDLW R+ AW M ++ R T+ LVV H ++++L+ TA E F +NG +E+ WSG E + R+ + WR L
Sbjct: 255 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKGNPVAAV----FVSPLLRARQTLE---VARTVAGEVLPPTETKLSELREIDLYEWQGRTQDEIRAEDPEFIRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAPS---RGETS--LVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGS--EAKWRKLHPDKGPWRCL 463
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A7S2X2Z9_9CHLO (Hypothetical protein n=2 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2X2Z9_9CHLO) HSP 1 Score: 134 bits (338), Expect = 9.170e-32 Identity = 81/197 (41.12%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 25 ILVRHGQSVFNAQGRLQGSLRHPRLTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEI 615
ILVRHGQS +NA+GR+QGS + LT GK+QA+ L + + +F SPL+RAQ T E I ++++D P+ +L +L EI LYS++G K E E + EAY LW+ PA+F + GHFPV +LW+RA AW+ +LR + LVV H + Q+LLC+A S F +F +NG I
Sbjct: 97 ILVRHGQSTWNAEGRMQGSSDNSELTKKGKEQAETTRTLLEKAKFDS----SFVSPLKRAQSTGE---IVWQNTDLK-PE---VLQSLREIDLYSFQGLVKKEAEEDFQEAYALWKKHPASFEIDGHFPVNELWYRASLAWQRILR--------EEGTNTLVVAHNAINQALLCSATGLPSSYFRRFVQSNGALTAI 274
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A7S0F1H7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1H7_9CRYP) HSP 1 Score: 131 bits (330), Expect = 1.700e-31 Identity = 81/231 (35.06%), Postives = 117/231 (50.65%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRHPRLTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTD-PANFHL-GGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWLYPVTTEF 708
F+++RHG++ +NA+GR+QGS RLT G+ QA G L+ + ++ F SPL RA+ T E +A + ++L+ L E+ LY WEG K EI+ P+ Y LWR + P F L G +P+RDLW RA W+ + R L+V H + Q+LLCT E F K + N G E++ P + A QWRWLYP +E+
Sbjct: 158 FLILRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGGILSEIHIDSV----FVSPLTRARRTLE---LAEAGLGRNLSGSAIVLDDLREVDLYEWEGMLKKEIKEMYPDIYSLWRGENPRQFKLDSGKYPIRDLWKRASNVWDVLRRDATN------GKTTLIVAHNGINQALLCTTLGLSEEFFRKLEFPNCGIAEVI------IPHGQ---SKAKQWRWLYPTPSEW 366
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: Q00GN2_KARBR (Plastid phosphoglycerate mutase protein (Fragment) n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GN2_KARBR) HSP 1 Score: 130 bits (326), Expect = 2.270e-31 Identity = 82/243 (33.74%), Postives = 128/243 (52.67%), Query Frame = 1
Query: 10 PMRSFILVRHGQSVFNAQGRLQGSLRHPRLTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWLYPV---TTEFVNAASMS 729
P + ++++RHG++ FNA+G LQGS RLT G+ QA + G LA + + + F SPL RA T E + +S + P E + L L EI LYSWEG+ K +++ E P+ Y+ W++ +F + GH+P+ +LW RA+ AW + D R L+V H + Q+L +A D S F + + N GALE W + A +WRW P+ ++E+ +A + S
Sbjct: 95 PSKRYLILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPIEQV-FVSPLTRATSTLE---LVAQSLPCSLP-EAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAIRASED--GKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGALECDWPLGELH---------ASRWRWRLPLDEASSEWRSATAAS 321
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A812W3K3_SYMMI (NEK3 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W3K3_SYMMI) HSP 1 Score: 135 bits (339), Expect = 2.790e-31 Identity = 84/223 (37.67%), Postives = 119/223 (53.36%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRHPR-LTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWL 687
F+LVRHGQ+ FNA+ R QGS+ LT G QA+E G L +P+ + F SPL RA++T E +A + + P L+ L EI LY W+GR + EI AE PE RLW+ + N + G + VRDLW R+ AW M ++ R T+ LVV H ++++L+ TA E F +NG +E+ WSG E + R+ + WR L
Sbjct: 1047 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKGNPVAAV----FVSPLLRARQTLE---VARTVAGEVLPPTETKLSELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAPS---RGETS--LVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGS--EAKWRKLHPDKGPWRCL 1255
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: A0A813CTF3_9DINO (NEK3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CTF3_9DINO) HSP 1 Score: 135 bits (339), Expect = 3.040e-31 Identity = 84/223 (37.67%), Postives = 119/223 (53.36%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRHPR-LTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFPVRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKFPWANGGALEIVWSGVGVEPEARRFYGSACQWRWL 687
F+LVRHGQ+ FNA+ R QGS+ LT G QA+E G L +P+ + F SPL RA++T E +A + + P L+ L EI LY W+GR + EI AE PE RLW+ + N + G + VRDLW R+ AW M ++ R T+ LVV H ++++L+ TA E F +NG +E+ WSG E + R+ + WR L
Sbjct: 1047 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKGNPVAAV----FVSPLLRARQTLE---VARTVAGEVLPPTETKLSELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAPS---RGETS--LVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGS--EAKWRKLHPDKGPWRCL 1255
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Match: R1DPI0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DPI0_EMIHU) HSP 1 Score: 125 bits (314), Expect = 3.280e-30 Identity = 89/241 (36.93%), Postives = 117/241 (48.55%), Query Frame = 1
Query: 22 FILVRHGQSVFNAQGRLQGSLRHPRLTNLGKQQAQECGAALAASPLVNLGPLAFCSPLRRAQETAEEIKIAFESSDKAFPKEVLILNALSEIGLYSWEGRPKVEIEAESPEAYRLWRTDPANFHLGGHFP-----VRDLWHRARGAWETMLRLTDEVAMRQPTAAVLVVGHYCMLQSLLCTAFSRDESSFWKF------------PWANGGALEIVWSGVGVEPEARRFYGSACQWRWLYP 693
F+++RHGQ+ N G +QGS RL++ G+ QA+E GAALA V + F SPL RAQ+T E + + + D P L+ L EI L SWEGR K E+ AE P+ Y W+ DP + G P + +LW RAR A LR D A A LVV H + Q+LLCTA D +++ + P+ N G EI W P A R WRW P
Sbjct: 22 FLVLRHGQTDHNRDGIIQGSSDVSRLSDRGRTQAREVGAALARLGDVRVART-FLSPLARAQQTHEILLL--DRPDLPTPT---TLDGLREIDLGSWEGRAKAELRAEQPDVYAAWQCDPLAMVVDGRRPRCRKPIVELWERARSAAWPTLRAVDTAAAEDDEGATLVVCHGSLGQALLCTALGLDATAWRRHRLARCTAERARHPFPNCGMAEIDWPADA--PRATR-------WRWRLP 247 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6652.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6652.1.1 >prot_P-wetherbeei_contig6652.1.1 ID=prot_P-wetherbeei_contig6652.1.1|Name=mRNA_P-wetherbeei_contig6652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=257bp MLLPMRSFILVRHGQSVFNAQGRLQGSLRHPRLTNLGKQQAQECGAALAAback to top mRNA from alignment at P-wetherbeei_contig6652:560..1757- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6652.1.1 ID=mRNA_P-wetherbeei_contig6652.1.1|Name=mRNA_P-wetherbeei_contig6652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1198bp|location=Sequence derived from alignment at P-wetherbeei_contig6652:560..1757- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6652:560..1757- >mRNA_P-wetherbeei_contig6652.1.1 ID=mRNA_P-wetherbeei_contig6652.1.1|Name=mRNA_P-wetherbeei_contig6652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=771bp|location=Sequence derived from alignment at P-wetherbeei_contig6652:560..1757- (Phaeothamnion wetherbeei SAG_119_79)back to top |