mRNA_P-wetherbeei_contig6651.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 131 bits (330), Expect = 3.810e-28 Identity = 84/229 (36.68%), Postives = 118/229 (51.53%), Query Frame = 3
Query: 480 MMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIKHTGHTCTGDLVLVITEQLCGKYNI--EPINIVTDCEPSMIAAGRDLPFD-----HTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAITIMGGNDKLFKGAGRGRVNLAPTAAEWEIARQGATILEPFMVAQK 1145
M+D + +IT D WTS N++Y S+T +I+ W+L L+ DC KHTG T TG+ + + + ++++ I VTDCEPSMI AGR L D H GC HR+++ T F G + A R L + SSQ+ L C + + QDV TRWWST+ M +L L KAI + D+ V+ + +WE+ R IL PFM AQK
Sbjct: 35 MLDAEFVAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTG-TTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLGALGLA-RTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDE---------VHPLLSDTDWEVLRLIEPILRPFMKAQK 252
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 131 bits (329), Expect = 4.210e-28 Identity = 87/240 (36.25%), Postives = 120/240 (50.00%), Query Frame = 3
Query: 480 MMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIKHTGHTCTGDLVLVITEQ-----LCGKYNIEPINIVTDCEPSMIAAGRDLP-----FDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAITIMGGNDKLFKGAGRGRVNLAPTAAE--WEIARQGATILEPFMVAQKMHAGGR 1163
M+D + +IT D WTS +N++Y S+T +I+ W+L L+ +C KHTG T DL IT L G+ VTDCEPSM+ AGR L +H GC HR+++ T F G + A K R + + SSQ++ L + + QDV TRWWS++ M E +L L KAI + D N+AP +E WE+ R IL PFM AQK G +
Sbjct: 71 MLDDEYVAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTA----CVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLGALAKA-RAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTD-----------NIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAK 294
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: A0A836CHX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX8_9STRA) HSP 1 Score: 115 bits (287), Expect = 1.930e-24 Identity = 77/204 (37.75%), Postives = 99/204 (48.53%), Query Frame = 3
Query: 99 SKSSMIWKFGI*L-RYV---TLKLPRIAICGICAQNGNYAKAEVKLNK-SFSPTAAKQHLFRKHRELWNALVAAEDAEKNGKLTATGQTTMGKFFQVKEPEFYEPLCRYVVDHYLPLSHIGSNSLRLSLQH-------------QMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIKHTGHTCTGDLVLVI 656
S S IW FG+ YV + L + +C C + AE+ NK S SP+ A QHL H++L LT + GKF V P F E LC+Y+V++YLPLS + R L+H M GQ E+ITVD WTS AN+TY S TRH+I+ WEL+SL +C H G DLV I
Sbjct: 68 SGKSPIWSFGLGFSNYVGKGSESLAHLIVCEQCILDDTLHTAEINYNKDSKSPSKAVQHLESVHKDLHRQY-----------LTGGHGSISGKFQAVSSPNFIEKLCKYIVNNYLPLSTVEDEDFR-ELEHLIHYHSELEIDIATMAAGQEEAITVDGWTSYANETYHSFTRHYISEGWELVSLALECTLHAGRATAEDLVRAI 259
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: UPI00187CBB75 (E3 SUMO-protein ligase ZBED1-like n=4 Tax=Acanthopagrus latus TaxID=8177 RepID=UPI00187CBB75) HSP 1 Score: 95.9 bits (237), Expect = 1.490e-16 Identity = 80/311 (25.72%), Postives = 130/311 (41.80%), Query Frame = 3
Query: 171 ICGICAQNGNYAKAEVKLNKSFS-------------PTAAKQHLFRKHRELWNALVAAEDAEKNGKLTATGQTTMGKF---FQVKEPEFYEPLCRYVVDHYLPLS--HIGSNSLRL-------SLQHQMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIKHTGHTCTGDLVLVITEQLCGKYNIEPIN-----IVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAIT 1013
+C IC +Y + L + P+ AKQ ++L +L D+ + K+T T + K + V E E + L + + HY+ + H+ + + + +M + +IT D+WTS + +Y +VT H+I+N W L+S + T T + I + L G + +VTD +M+ A + H GC AH L+ + K P V+ + R +A FH S+ ILK +L P K+ DV TRW S M E L + AI+
Sbjct: 51 VCKICQAEVSYCRNTTNLRNHLTRYHTTLTFASDNKPSGAKQ------KKLRESLTLPADSPRAIKITEAIATFVCKDLRPYSVVENEGFRRLLQVLEPHYVMVQRKHLTETVIPMMYTCVKDDILTKMQSAERVAITCDTWTSLSTQSYMTVTSHYIDNEWCLMSH----VLQTTEVLTSHTAINIADMLTGAIQEWGLTSKDPAVVTDNAANMVRAVEIMQLMHVGCFAHTLNLASQAGLKVPAVSRLLARVRRIATFFHRSTMANHILKEKQKLLQLPAHKLTVDVVTRWNSALDMLERFLEQQPAIS 351
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: UPI00187C228E (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Acanthopagrus latus TaxID=8177 RepID=UPI00187C228E) HSP 1 Score: 90.5 bits (223), Expect = 1.940e-15 Identity = 57/184 (30.98%), Postives = 85/184 (46.20%), Query Frame = 3
Query: 477 QMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIKHTGHTCTGDLVLVITEQLCGKYNIEPIN-----IVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAIT 1013
+M + +IT D+WTS + +Y +VT H+I+N W L+S + T T + I + L G + +VTD +M+ A + H GC AH L+ + K P V+ + R +A FH S+ ILK +L P K+ DV TRW S M E L + AI+
Sbjct: 26 KMQSAERVAITCDTWTSLSTQSYMTVTSHYIDNEWCLMSH----VLQTTEVLTSHTAINIADMLTGAIQEWGLTSKDPAVVTDNAANMVRAVEIMQLMHVGCFAHTLNLASQAGLKVPAVSRLLARVRRIATFFHRSTMANHILKEKQKLLQLPAHKLTVDVVTRWNSALDMLERFLEQQPAIS 205
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: A0A8C4EH42_DICLA (Uncharacterized protein n=1 Tax=Dicentrarchus labrax TaxID=13489 RepID=A0A8C4EH42_DICLA) HSP 1 Score: 91.3 bits (225), Expect = 3.960e-15 Identity = 61/191 (31.94%), Postives = 90/191 (47.12%), Query Frame = 3
Query: 450 NSLRLSLQHQMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLS----LTADCIKHTGHTCTGDLVLVITEQLCGKYNIEPINIVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAI 1010
N + + M +IT DSWTS A +++ +VT H+IN W+++S A C HTG L V+ E N+ +V+D +M+ A + F H C AH L+ + K +A + R +A FH SS + LK + G +K+ DV TRW S+Y M E LG + AI
Sbjct: 148 NDTKAQMIASMSKATRIAITCDSWTSVATESFVTVTAHYINEDWQMVSHVLQTRALCESHTGAHLAELLSKVLQEWQITDKNVA---LVSDNASNMVVAAQVGKFPHVRCFAHTLNLTSQRALKVTSLARLLGRIRRIATFFHHSSTASHQLKVNQKCLGLKKQKLLNDVVTRWNSSYDMVERFLGQQPAI 335
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: A0A8M1KFB0_CLUHA (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A8M1KFB0_CLUHA) HSP 1 Score: 91.3 bits (225), Expect = 4.260e-15 Identity = 60/212 (28.30%), Postives = 102/212 (48.11%), Query Frame = 3
Query: 378 EPEFYEPLCRYVVDHYLPLSHIGSNSLRLSLQHQMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADC-IKHTGHTCTGDLVLVITEQLCGKYNIEPINIVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAI 1010
+P++ P RY D +P + + + + +M+ ++T D+WTS A +Y ++T HFIN W+L+SL + HT G V + +++ ++++ + +VTD +M+ A + H C AH L+ K P V+ + R + FH S+ L +L G P K+ DVSTRW S + M + L + AI
Sbjct: 131 DPKYKIPSRRYFTDTAIPTLY---SETKAKVLDTLMEAGRVALTCDAWTSIATVSYVTITAHFINKDWQLVSLVLQTRAMYESHT--GANVADLLKRVAEEWHLNDVVLVTDNAANMVVAAQLGGLVHVRCYAHTLNLACQRALKLPSVSRLLARIRRIVSFFHRSTVGAYELGEKQKLLGLPCHKLITDVSTRWNSAFEMVDRFLEQQPAI 337
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: A0A6P7K2I3_9TELE (zinc finger BED domain-containing protein 1-like n=4 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7K2I3_9TELE) HSP 1 Score: 90.5 bits (223), Expect = 5.660e-15 Identity = 59/190 (31.05%), Postives = 94/190 (49.47%), Query Frame = 3
Query: 453 SLRLSLQHQMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIK-HTGHTCTG--DLVLVITEQLCGKYNIEPINIVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAIT 1013
S++ ++ ++ IT D+WTS A ++Y SVT H+I+ W L+S + T H +++ V E+ G + +P+ +VTD +M+ A + H GC AH ++ + FK P +A + R +A FH S+ T ILK +L K+ DV TRW S M E L + AI+
Sbjct: 156 SVKEDVKSKLKSAVRVGITSDTWTSVATESYMSVTAHYIDEEWNLISYVLQTTEVETDHRSASLAEMMTVAIEEW-GLMSKDPV-MVTDNAANMVHAVEIMGLTHVGCFAHIINLASQAGFKLPNIARLLGRVRHIAKFFHRSTTATRILKEKQKLLQLKAHKLTIDVVTRWNSVLEMLERFLEQQPAIS 343
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: A0A3B1J7G0_ASTMX (BED-type domain-containing protein n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1J7G0_ASTMX) HSP 1 Score: 90.1 bits (222), Expect = 1.010e-14 Identity = 66/210 (31.43%), Postives = 102/210 (48.57%), Query Frame = 3
Query: 405 RYVVDHYLPLSHIGSNSLRLSLQH----QMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIK-HTGHTCTGDLVLVITE--QLCGKYNIEPINIVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAIT 1013
RYV+ LS + +L ++H + + ++T DSW S A D+Y ++T H+I+N W L+S + T HT + +L +++E Q N +P IVTD +M A H GC AH L+ + K P VA + R +A FH S+ + LK ++ G P K+ DV+TRW S M + L + AI+
Sbjct: 156 RYVLPTRKHLSEVAIPNLYRDVKHGVATSLKSTERVALTCDSWVSRAMDSYLTITAHYIDNEWRLMSHVLQTREIETSHTAS-NLAELLSEAIQEWELANKDPA-IVTDNAANMTRAVELTNLLHVGCFAHTLNLASQAALKTPPVARLLGRVRRIASFFHRSTTASHQLKEKQKILGLPAHKLVIDVTTRWNSALEMLQRFLEQQPAIS 363
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Match: UPI002013F7D6 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI002013F7D6) HSP 1 Score: 88.6 bits (218), Expect = 2.800e-14 Identity = 64/221 (28.96%), Postives = 105/221 (47.51%), Query Frame = 3
Query: 360 KFFQVKEPEFYEPLCRYVVDHYLPLSHIGSNSLRLSLQHQMMDGQAESITVDSWTSPANDTYFSVTRHFINNFWELLSLTADCIK-HTGHTCTGDLVLVITEQL--CGKYNIEPINIVTDCEPSMIAAGRDLPFDHTGCLAHRLDTVTGVWFKGPGVAATTKKNRELAMTFHSSSQLTDILKHTCELAGCPYRKIQQDVSTRWWSTYTMFESVLGLEKAIT 1013
+ +V EP + +++ + +P + +++ + ++ + IT D+WTS A ++Y SVT H+I+ W L+S + T H L ++T+ + G + +P IVTD +MI A H GC H ++ + K P VA + R +A FH S+ T ILK +L K++ DV TRW ST M E L + AI+
Sbjct: 116 RLMKVMEPNYVIVSRKHLSEEVIPNMY---QTVKDGVVCKLKTAERVGITSDTWTSVATESYMSVTAHYIDELWNLVSYVLQTTEVQTDHRSVS-LAEMLTKAMEEWGLLSKDPA-IVTDNAANMICAVEITGLTHVGCFEHIINLASQAGLKLPNVARLLGRVRHIAKFFHRSTTATRILKEKQKLLQLNAHKLKIDVVTRWNSTLEMLERFLEQQPAIS 331 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6651.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6651.1.3 >prot_P-wetherbeei_contig6651.1.3 ID=prot_P-wetherbeei_contig6651.1.3|Name=mRNA_P-wetherbeei_contig6651.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=444bp MGKFFQVKEPEFYEPLCRYVVDHYLPLSHIGSNSLRLSLQHQMMDGQAESback to top mRNA from alignment at P-wetherbeei_contig6651:49..3355- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6651.1.3 ID=mRNA_P-wetherbeei_contig6651.1.3|Name=mRNA_P-wetherbeei_contig6651.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3307bp|location=Sequence derived from alignment at P-wetherbeei_contig6651:49..3355- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6651:49..3355- >mRNA_P-wetherbeei_contig6651.1.3 ID=mRNA_P-wetherbeei_contig6651.1.3|Name=mRNA_P-wetherbeei_contig6651.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1332bp|location=Sequence derived from alignment at P-wetherbeei_contig6651:49..3355- (Phaeothamnion wetherbeei SAG_119_79)back to top |