mRNA_P-wetherbeei_contig6643.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A835ZAE3_9STRA (Cytoplasmic ribosomal protein L18 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAE3_9STRA) HSP 1 Score: 311 bits (797), Expect = 3.950e-106 Identity = 156/192 (81.25%), Postives = 170/192 (88.54%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGIDLVAGGRRVGHK RSAPKS NVYLGLL KLY+FLARRT+S F ATVL+RLYMSKTNRPPL + RL+ FM GK+ T V+V TVTDDNRLLEVPK+TVCALRFTESAR+RI+AAGGECLTFDQLAL+ P G++ VLLRGPK ARE RHFGHRTTVTNPHTHN VKPYVRS GRKFE+ARGRR SNGFKV
Sbjct: 1 MGIDLVAGGRRVGHKARSAPKSDNVYLGLLSKLYKFLARRTNSNFVATVLKRLYMSKTNRPPLGLGRLSKFMIGKDGLTAVVVATVTDDNRLLEVPKMTVCALRFTESARSRIVAAGGECLTFDQLALKVPTGSNCVLLRGPKNAREANRHFGHRTTVTNPHTHNGVKPYVRSKGRKFEKARGRRASNGFKV 192
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A7S3NFY8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NFY8_9STRA) HSP 1 Score: 305 bits (780), Expect = 1.540e-103 Identity = 151/192 (78.65%), Postives = 171/192 (89.06%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGIDL AGGRRVGHK RS P S NVYL LLVKLYRFLARRTDSKF VL+RLYMS+TNRPPLS++RLA FMK K++KT V+VGTVTDD RLLEVPK++VCALRFTE+ARARIL +GGECLTFDQLALRAPKG+ TVLLRGPKK RE Y+HFGHR+T T+ TH+HVKPYVRS GRKFE+ARGRR++NGFK+
Sbjct: 1 MGIDLKAGGRRVGHKARSEPLSDNVYLKLLVKLYRFLARRTDSKFVKVVLKRLYMSRTNRPPLSVSRLARFMKDKDEKTAVIVGTVTDDPRLLEVPKMSVCALRFTETARARILKSGGECLTFDQLALRAPKGSGTVLLRGPKKVREVYKHFGHRSTPTSVKTHDHVKPYVRSKGRKFERARGRRKTNGFKI 192
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A7S2UVJ6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVJ6_9STRA) HSP 1 Score: 291 bits (744), Expect = 4.680e-98 Identity = 147/192 (76.56%), Postives = 166/192 (86.46%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGIDL AGGRRVGHK R++PKSKNVYL LLV+LYRFLARRTDSKF VL+RLYMSKTN PP+SI+RL +MKGKED+T V+VGTVTDD+RLL++P L VCAL+FTE+ARARIL AGGE LTFDQLAL+ PKGA TVLLRGPK ARE RHFGHR+T+ + HTH VKPYVRS GRKFE+ARGRR S GFKV
Sbjct: 1 MGIDLKAGGRRVGHKVRTSPKSKNVYLNLLVRLYRFLARRTDSKFVKVVLKRLYMSKTNSPPMSISRLTRYMKGKEDQTAVIVGTVTDDSRLLKLPALKVCALKFTEAARARILKAGGEVLTFDQLALQQPKGAGTVLLRGPKNAREAVRHFGHRSTLDSVHTHCGVKPYVRSKGRKFEKARGRRGSRGFKV 192
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: F0Y951_AURAN (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y951_AURAN) HSP 1 Score: 291 bits (744), Expect = 4.680e-98 Identity = 146/192 (76.04%), Postives = 167/192 (86.98%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGID+VAGGRRVGHK R+ KS+NVYL LLVKLYRFLARRTDS F TVL+RL+MS+TNRPPLS++ LA FM+ K+DK VLVGT+TDD R+L VPK+TVCALRFTE+ARARI+ AGGECLTFDQLALRAPKG++TVLLRGPKKARE Y HFGHR+T T+ TH VKPYVR+ GRKFE+ARGRR S GFKV
Sbjct: 1 MGIDIVAGGRRVGHKARTDTKSENVYLKLLVKLYRFLARRTDSAFVKTVLKRLFMSRTNRPPLSLSALARFMREKDDKIAVLVGTITDDPRMLTVPKMTVCALRFTETARARIVKAGGECLTFDQLALRAPKGSNTVLLRGPKKAREVYSHFGHRSTTTSVKTHCGVKPYVRAKGRKFEKARGRRHSRGFKV 192
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A024TMV8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=8 Tax=Eukaryota TaxID=2759 RepID=A0A024TMV8_9STRA) HSP 1 Score: 275 bits (704), Expect = 5.760e-92 Identity = 137/192 (71.35%), Postives = 162/192 (84.38%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MG D+VAGG+ G K R+APKS+NVYL LLV+LYRFLARRTD+KF VL+RLYMS+TN+PP+SI R+A +MK KED+ V+VGT+TDD RL +VPKLT+ AL FTESARAR+L AGGE LTFDQLALRAPKG +TVLLRG K ARE YRHFGH +T+ + +TH+HVKPYVRS GRKFE+ARGRR S GFKV
Sbjct: 1 MGKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 192
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A418B288_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A418B288_9STRA) HSP 1 Score: 273 bits (699), Expect = 5.180e-91 Identity = 136/191 (71.20%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 4 GIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
G D+VAGG+ G K R+APKS+NVYL LLV+LYRFLARRTD+KF VL+RLYMS+TN+PP+SI R+A +MK KED+ V+VGT+TDD RL +VPKLT+ AL FTESARAR+L AGGE LTFDQLALRAPKG +TVLLRG K ARE YRHFGH +T+ + +TH+HVKPYVRS GRKFE+ARGRR S GFKV
Sbjct: 15 GKDIVAGGKSTGRKSRTAPKSENVYLNLLVRLYRFLARRTDAKFNQNVLKRLYMSRTNQPPMSIARVARYMKNKEDQIAVVVGTITDDIRLFDVPKLTIAALGFTESARARVLKAGGEILTFDQLALRAPKGQNTVLLRGRKTAREVYRHFGHESTLDSVNTHDHVKPYVRSKGRKFEKARGRRNSRGFKV 205
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A5D6XV36_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Pythiaceae TaxID=4782 RepID=A0A5D6XV36_9STRA) HSP 1 Score: 273 bits (697), Expect = 9.420e-91 Identity = 137/191 (71.73%), Postives = 161/191 (84.29%), Query Frame = 1
Query: 4 GIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
GIDL+AGG+ VG K R+APKS+NVYL LLV+LYRFLARRT+SKF + VL+RLY S TN+ P+SI R+A +M G E K V+VGTVTDD RLL VPK++V AL FTE+ARARI AGGECL+FDQLALRAPKGA+TVLLRG + ARE YRHFGH++TV + HTH+HVKPYVRS GRKFE ARGRR+S GFKV
Sbjct: 12 GIDLIAGGKVVGKKNRTAPKSENVYLNLLVRLYRFLARRTNSKFNSIVLRRLYQSNTNQAPMSIGRVARYMTGHEGKLAVIVGTVTDDIRLLNVPKVSVVALAFTETARARITNAGGECLSFDQLALRAPKGANTVLLRGRRTAREVYRHFGHKSTVNSVHTHDHVKPYVRSKGRKFEMARGRRKSRGFKV 202
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A7S2W9J6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9J6_9STRA) HSP 1 Score: 272 bits (696), Expect = 1.290e-90 Identity = 137/192 (71.35%), Postives = 160/192 (83.33%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGIDL AGGR+V HK+R APKS+NVYL LLVKLY FL+RRTDSKF VL+RLYMSK N+PP+S++++A FM EDK V+VG VTDD RL E+PKL VCALRFT ARARIL AGGECLTFDQLAL AP G+ TVLLRG K RE +HFGH+T+V +PHTH++VKPY+R+ GRKFE+ARGRRRSNGFKV
Sbjct: 11 MGIDLKAGGRKVHHKERKAPKSQNVYLKLLVKLYSFLSRRTDSKFCKVVLKRLYMSKLNKPPISVSKIARFMGAHEDKIAVIVGPVTDDVRLTELPKLRVCALRFTAGARARILKAGGECLTFDQLALVAPSGSKTVLLRGSKN-REALKHFGHKTSVASPHTHDNVKPYIRAKGRKFERARGRRRSNGFKV 201
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: A0A4D9D1Z3_9STRA (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1Z3_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.850e-90 Identity = 138/192 (71.88%), Postives = 159/192 (82.81%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGIDL +GGRR GHK R+APKS NVYL LLVKLYRFLARRTDS F A +L+RL+MSK NRPP++I+RL MKGKE KT V+VGT+TDD R+LEVPKL+V AL+ T +ARARIL AGGE LTFD+LALRAPKG + VLLRGP RE HFGHR+TV N HTH++VKPY RS GRKFE+ARGRRRS GFK+
Sbjct: 1 MGIDLKSGGRRTGHKTRTAPKSDNVYLKLLVKLYRFLARRTDSNFNAVILKRLFMSKNNRPPIAISRLVRHMKGKEGKTAVIVGTITDDARMLEVPKLSVAALKVTATARARILQAGGEILTFDELALRAPKGTNCVLLRGPHD-REALSHFGHRSTVGNVHTHDNVKPYTRSKGRKFEKARGRRRSTGFKI 191
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Match: H3GFQ7_PHYRM (Ribosomal_L18e/L15P domain-containing protein n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3GFQ7_PHYRM) HSP 1 Score: 270 bits (690), Expect = 7.800e-90 Identity = 137/192 (71.35%), Postives = 159/192 (82.81%), Query Frame = 1
Query: 1 MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLQRLYMSKTNRPPLSINRLASFMKGKEDKTGVLVGTVTDDNRLLEVPKLTVCALRFTESARARILAAGGECLTFDQLALRAPKGADTVLLRGPKKARECYRHFGHRTTVTNPHTHNHVKPYVRSVGRKFEQARGRRRSNGFKV 576
MGIDLVAGG+ VG K R+ PKS NVYL LLV+LYRFLARRTD+KF VL+RLY S TN+ PLS+ ++A FMK E K V+V TVTDD RLL VPKLTVCAL F+E+ARARI+ GGECL+FDQLALRAPKGA+TVLLRG +KAR Y HFGH++T+ + HTH+HVKPYVRS GRKFEQARGRR+S GFKV
Sbjct: 1 MGIDLVAGGKVVGKKNRTNPKSDNVYLNLLVRLYRFLARRTDAKFNDIVLRRLYQSNTNQAPLSLGKVARFMKKHEGKIAVVVATVTDDIRLLNVPKLTVCALSFSETARARIVKNGGECLSFDQLALRAPKGANTVLLRGARKARGVYAHFGHKSTLESVHTHDHVKPYVRSKGRKFEQARGRRKSRGFKV 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6643.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6643.1.1 >prot_P-wetherbeei_contig6643.1.1 ID=prot_P-wetherbeei_contig6643.1.1|Name=mRNA_P-wetherbeei_contig6643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=193bp MGIDLVAGGRRVGHKQRSAPKSKNVYLGLLVKLYRFLARRTDSKFTATVLback to top mRNA from alignment at P-wetherbeei_contig6643:1221..2748+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6643.1.1 ID=mRNA_P-wetherbeei_contig6643.1.1|Name=mRNA_P-wetherbeei_contig6643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1528bp|location=Sequence derived from alignment at P-wetherbeei_contig6643:1221..2748+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6643:1221..2748+ >mRNA_P-wetherbeei_contig6643.1.1 ID=mRNA_P-wetherbeei_contig6643.1.1|Name=mRNA_P-wetherbeei_contig6643.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig6643:1221..2748+ (Phaeothamnion wetherbeei SAG_119_79)back to top |