prot_P-wetherbeei_contig6641.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6641.1.1
Unique Nameprot_P-wetherbeei_contig6641.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length417
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6641.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 290..335
e-value: 0.0056
score: 16.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 188..237
e-value: 5.1E-10
score: 39.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 226..260
e-value: 5.3E-6
score: 24.3
coord: 191..224
e-value: 1.5E-5
score: 22.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 295..329
score: 9.865228
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 10.084454
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 11.366925
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 288..336
e-value: 5.4E-6
score: 28.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 113..287
e-value: 4.6E-44
score: 153.0
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 167..327
NoneNo IPR availablePANTHERPTHR47942:SF63TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 167..327
coord: 110..213
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 110..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6641contigP-wetherbeei_contig6641:828..3284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6641.1.1mRNA_P-wetherbeei_contig6641.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6641 753..3346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6641.1.1 ID=prot_P-wetherbeei_contig6641.1.1|Name=mRNA_P-wetherbeei_contig6641.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=417bp
MLEARLSPSGLAGLAKSPWGGGGLFTRPPQPRVRSTHVVCQGIAASGSDG
DRLRLRRSAGKPPFQEPRRSDESLESRAQRIYKFAKAKNFAEVIATYEAF
SDPIGDTGLANLVCNAARATGNWEVASRVIDDLSANDAMPDVFTYNAAIA
ACAGSSASSSTSPSPQRPGSWRRAVQLLDIMRQRGVRPDVVSYNTCMHVC
GRAKQWQRVLHLLGDMKVHGPTPNVYTWNTALSALARGGQHAAALGLLDE
MRGAGQRPDAVTYRAAAAACEQGGLWEAALELLEQHRAELGSEPDVQMYT
SVVNACRRARQAGPALQLLDEMAAKGVEATDRIYNRWGIPASGTYLVGLA
PISFCFSLLLLHVCSYLNSRSFATAICPSGRDCSRCSVISGLLANPLVFL
SFLFSCRCTLALPLTA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf