prot_P-wetherbeei_contig664.4.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig664.4.2
Unique Nameprot_P-wetherbeei_contig664.4.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length214
Homology
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: UPI00103DCEEC (zinc finger CCCH domain-containing protein 32-like isoform X2 n=1 Tax=Glycine soja TaxID=3848 RepID=UPI00103DCEEC)

HSP 1 Score: 65.9 bits (159), Expect = 4.320e-9
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query:  132 YPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD---IEPKLPPPGL-----ALHG 177
            YP RPG+P+C++Y+R   CKFGL CRY HPRD     P L P GL     ALHG
Sbjct:  293 YPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVGLPLRPVALHG 346          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A388L5N0_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388L5N0_CHABU)

HSP 1 Score: 65.5 bits (158), Expect = 6.850e-9
Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
Query:  125 AEVLRANYPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD------IEPKLPPPGLAL 175
            A  + A+YP RPGQP+C+F++RN  CKFG  C++ HPR         P  PPPG+ L
Sbjct:  342 APAVAASYPERPGQPECQFFLRNGECKFGASCKFHHPRKGAVQPVALPIAPPPGVKL 398          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A072VP95_MEDTR (Zinc finger C-x8-C-x5-C-x3-H type protein n=9 Tax=IRL clade TaxID=2233839 RepID=A0A072VP95_MEDTR)

HSP 1 Score: 63.5 bits (153), Expect = 2.500e-8
Identity = 31/60 (51.67%), Postives = 37/60 (61.67%), Query Frame = 0
Query:  119 GGATHSAEVLRANYPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD---IEPKLPPPGLAL 175
            GG+T   +V    +P RPG+P C++YMR   CKFGL CRY HPRD     P L P GL L
Sbjct:  286 GGSTLQEKV----FPERPGEPVCQYYMRTGDCKFGLACRYHHPRDQVAARPLLSPFGLPL 341          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A0K9QFH9_SPIOL (Uncharacterized protein n=1 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9QFH9_SPIOL)

HSP 1 Score: 63.5 bits (153), Expect = 3.170e-8
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:  117 KSGGATHSAEVLR-ANYPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD 163
            KSG ++H  + L+   YP RPGQP+CEF+M+  +CKF   CRY HPRD
Sbjct:  377 KSGASSHQQQQLQNEQYPERPGQPECEFFMKTGNCKFKSACRYHHPRD 424          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A2P2MB05_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MB05_RHIMU)

HSP 1 Score: 62.8 bits (151), Expect = 3.190e-8
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = 0
Query:  121 ATHSAEVLRANYPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRDIEPKLPPPGLALHG 177
            A    ++L   +P RPGQP+C FYM+   CKF   C+Y HPR+  PK PP  L+  G
Sbjct:  159 AHQQPQMLIDEFPERPGQPECSFYMKTGDCKFKSNCKYHHPRNWLPKSPPRSLSDKG 215          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A445IGY6_GLYSO (Zinc finger CCCH domain-containing protein 32 isoform B n=7 Tax=Glycine subgen. Soja TaxID=1462606 RepID=A0A445IGY6_GLYSO)

HSP 1 Score: 63.2 bits (152), Expect = 3.380e-8
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  132 YPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD---IEPKLPPPGLAL 175
            +P RPG+P+C++Y+R   CKFGL CRY HPRD     P L P GL L
Sbjct:  293 FPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPLLSPVGLPL 339          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A2P2MAV2_RHIMU (Uncharacterized protein n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MAV2_RHIMU)

HSP 1 Score: 62.8 bits (151), Expect = 3.840e-8
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = 0
Query:  121 ATHSAEVLRANYPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRDIEPKLPPPGLALHG 177
            A    ++L   +P RPGQP+C FYM+   CKF   C+Y HPR+  PK PP  L+  G
Sbjct:  188 AHQQPQMLIDEFPERPGQPECSFYMKTGDCKFKSNCKYHHPRNWLPKSPPRSLSDKG 244          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A7S3U647_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U647_9SPIT)

HSP 1 Score: 59.3 bits (142), Expect = 4.370e-8
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 0
Query:  126 EVLRANYPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRDIEP 166
            E+     PLRP Q  C FY++  +CKFG QCRYDHP  IEP
Sbjct:    8 ELNEIGLPLRPEQEPCSFYLKTGTCKFGPQCRYDHPNGIEP 48          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A1S3UY86_VIGRR (zinc finger CCCH domain-containing protein 32 isoform X4 n=8 Tax=Phaseoleae TaxID=163735 RepID=A0A1S3UY86_VIGRR)

HSP 1 Score: 62.8 bits (151), Expect = 4.790e-8
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  132 YPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD---IEPKLPPPGLAL 175
            +P RPG+P+C++Y+R   CKFGL CRY HPRD     P L P GL L
Sbjct:  293 FPERPGEPECQYYLRTGDCKFGLACRYHHPRDHIVARPLLNPVGLPL 339          
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Match: A0A8B8M6V8_ABRPR (zinc finger CCCH domain-containing protein 32 isoform X4 n=6 Tax=indigoferoid/millettioid clade TaxID=2233855 RepID=A0A8B8M6V8_ABRPR)

HSP 1 Score: 62.8 bits (151), Expect = 4.790e-8
Identity = 26/47 (55.32%), Postives = 32/47 (68.09%), Query Frame = 0
Query:  132 YPLRPGQPKCEFYMRNNSCKFGLQCRYDHPRD---IEPKLPPPGLAL 175
            +P RPG+P+C++Y+R   CKFGL CRY HPRD     P L P GL L
Sbjct:  293 FPERPGEPECQYYLRTGDCKFGLACRYHHPRDQIVARPLLSPIGLPL 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig664.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00103DCEEC4.320e-955.56zinc finger CCCH domain-containing protein 32-like... [more]
A0A388L5N0_CHABU6.850e-947.37Uncharacterized protein n=2 Tax=Chara braunii TaxI... [more]
A0A072VP95_MEDTR2.500e-851.67Zinc finger C-x8-C-x5-C-x3-H type protein n=9 Tax=... [more]
A0A0K9QFH9_SPIOL3.170e-854.17Uncharacterized protein n=1 Tax=Spinacia oleracea ... [more]
A0A2P2MB05_RHIMU3.190e-845.61Uncharacterized protein n=1 Tax=Rhizophora mucrona... [more]
A0A445IGY6_GLYSO3.380e-855.32Zinc finger CCCH domain-containing protein 32 isof... [more]
A0A2P2MAV2_RHIMU3.840e-845.61Uncharacterized protein n=1 Tax=Rhizophora mucrona... [more]
A0A7S3U647_9SPIT4.370e-856.10Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A1S3UY86_VIGRR4.790e-855.32zinc finger CCCH domain-containing protein 32 isof... [more]
A0A8B8M6V8_ABRPR4.790e-855.32zinc finger CCCH domain-containing protein 32 isof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 135..162
e-value: 0.0015
score: 27.8
coord: 181..208
e-value: 6.1E-6
score: 35.7
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 137..162
e-value: 1.1E-7
score: 31.5
coord: 183..207
e-value: 6.6E-8
score: 32.3
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 181..209
score: 14.445695
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 135..163
score: 14.229746
NoneNo IPR availableGENE3D2.30.30.1190coord: 172..212
e-value: 2.8E-6
score: 29.4
coord: 109..168
e-value: 2.3E-6
score: 29.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..75
NoneNo IPR availablePANTHERPTHR12506PROTEIN PHOSPHATASE RELATEDcoord: 127..210
coord: 93..165
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 184..209
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 138..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig664contigP-wetherbeei_contig664:7862..8940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig664.4.2mRNA_P-wetherbeei_contig664.4.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig664 7862..8940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig664.4.2 ID=prot_P-wetherbeei_contig664.4.2|Name=mRNA_P-wetherbeei_contig664.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp
LSTLSPNNCFPTMNSVVTIVVSPPCDSPAGAAAPEAFVVPVAQTGDPAPS
QGAGGMEDRSSIDANASTSPHAPAETTATMGAKRSMPDEEASSPSEKKQR
TDRGGGGGAGTAAVGGKSGGATHSAEVLRANYPLRPGQPKCEFYMRNNSC
KFGLQCRYDHPRDIEPKLPPPGLALHGYPLRPGEQECPYYMRNGHCSYSP
NCHYHHPLEAPAYW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf