mRNA_P-wetherbeei_contig6639.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6639.2.1
Unique NamemRNA_P-wetherbeei_contig6639.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A6H5KWX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX9_9PHAE)

HSP 1 Score: 495 bits (1274), Expect = 1.330e-173
Identity = 245/362 (67.68%), Postives = 281/362 (77.62%), Query Frame = 1
Query:   13 RKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVP----KPVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            RKEIYTYEAPW +++MGW QR D    +RLA+GS+ E YNN+VQ                           IVQR++ SF    + +HPYPPTKIMWSPDKS  + DLLATTGDYLRLWSV     GG      VK+ + LNNN ++EYCSPLTSFDWCD DP+ VGTSS DTTCTIWDVATG PKTQLIAHDKEVYD+AF++TK++FASVGADGSVRMFDLR LEHSTIIYET DL PL+RL+WNKQD NYLA +LTDSAKTVILDIRVPSLPVA LGGH + V+A+AWAPHSSCH+CTAGDD Q+LIWDLS+VP    K V+DPILAY+AE ++NQLQW+ASH EWI IAF NKMQILRV
Sbjct:   10 RKEIYTYEAPWHIYAMGWCQRSDPGDRYRLAVGSFTEEYNNKVQ---------------------------IVQRTETSFVRTGELEHPYPPTKIMWSPDKSLNSPDLLATTGDYLRLWSVDEQEPGG------VKLHSLLNNNTNAEYCSPLTSFDWCDADPSTVGTSSIDTTCTIWDVATGTPKTQLIAHDKEVYDIAFARTKDIFASVGADGSVRMFDLRSLEHSTIIYETHDLTPLMRLSWNKQDPNYLATILTDSAKTVILDIRVPSLPVAMLGGHQSPVSAIAWAPHSSCHICTAGDDCQSLIWDLSSVPSSVPKAVEDPILAYTAEGQVNQLQWSASHPEWIAIAFANKMQILRV 338          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: B7G4D5_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G4D5_PHATC)

HSP 1 Score: 468 bits (1203), Expect = 1.120e-162
Identity = 233/359 (64.90%), Postives = 278/359 (77.44%), Query Frame = 1
Query:   13 RKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPK-PVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            RKEIYTY APWTVFSM WS+RQD+ S FRLA+GSY E Y+N VQ+ +         +P  VD  F+  G+  + ++         FDHPYP TKI+WSPD+S  A DLLATTGDYLR+W++   GSG G+  V+ K E  LNNNK+SEYC+PLTSFDW + DP +VGTSS DTTCTIWD+ T   +TQLIAHD+EV+DLAF++ K+VFASVGADGSVRMFDLR LEHSTIIYE+ +L PLLRL WNKQD NYLA  + DS +TVILDIRVPSLPVAELGGH   VNA AWAPHSSCH+CTAGDD+QALIWDLS + K PV++PILAY+A  EIN LQW+AS  +W+ IAF +K+QILRV
Sbjct:    5 RKEIYTYAAPWTVFSMAWSRRQDKTSQFRLAIGSYVEQYSNAVQIVKK--------VPQHVDSDFAGGGSASLYQA-------GSFDHPYPCTKILWSPDQSLAAPDLLATTGDYLRVWNIRDDGSGQGT--VQCKKECLLNNNKTSEYCAPLTSFDWNEADPNIVGTSSIDTTCTIWDIETQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMVDSRRTVILDIRVPSLPVAELGGHLGCVNATAWAPHSSCHICTAGDDSQALIWDLSAMSKRPVEEPILAYNASGEINNLQWSASQPDWVSIAFHDKLQILRV 346          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A6V1NZ18_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZ18_HETAK)

HSP 1 Score: 460 bits (1183), Expect = 1.220e-159
Identity = 218/360 (60.56%), Postives = 277/360 (76.94%), Query Frame = 1
Query:    7 SRRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPKPVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            SR+ EIYTY+APWT+FSM WSQR + +  FR+A+GS+ E Y+N+V++                         Q  + SD  FN + +F HPYPPTKIM+SP ++   +DLLATTGDYLRLW++       G++   V++E  LNNNK+SEYCSPLTSFDW + DP+++GTSS DTTCTIWDV TG  KTQLIAHDKEVYD++F+ +K++FASVGADGSVR+FDLR LEHSTIIYET  L PLLRLAWNKQD NYL  ++TDS  TV+LD+RVPS+PVA+L GH A VNA++WAPHSSCH+CT GDD QALIWDLS +P+P++DP+LAY+A AEINQ+QW+ASH +W+GIA+ + MQ+LRV
Sbjct:   18 SRKPEIYTYQAPWTIFSMAWSQRLEPQFHFRVAVGSFIEEYSNKVRI------------------------IQKAENSD-QFNLIGEFSHPYPPTKIMFSPQRTDVTKDLLATTGDYLRLWNIT------GNSEEPVRLETLLNNNKNSEYCSPLTSFDWNETDPSIIGTSSIDTTCTIWDVNTGQAKTQLIAHDKEVYDISFAHSKDIFASVGADGSVRLFDLRSLEHSTIIYETQGLTPLLRLAWNKQDPNYLGCIMTDSPTTVLLDVRVPSIPVAQLWGHEAPVNAISWAPHSSCHLCTVGDDQQALIWDLSAMPQPIEDPLLAYTAGAEINQIQWSASHPDWVGIAYTDSMQLLRV 346          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A7S2Y0K5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0K5_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 7.530e-159
Identity = 228/362 (62.98%), Postives = 273/362 (75.41%), Query Frame = 1
Query:    4 PSRRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQT-KEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPKPVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            P RRKEIYTYEAPWTVF+  WSQR + +  FRLA+GS+ E Y+N+VQV +      H                         F+ + + DH YPPTKIM+SP  S  +RDL+ATTGDYLRLW + +      +    V +EA LNN K+SEYCSPLTSFDW +VDP+++GTSS DTTCTIWD+A    +TQLIAHDK VYD+A+++  ++VFASVG DGSVRMFDLR LEHSTIIYETADL PLLRLAWNKQD NYLAA+LTDS+ TVI+DIRVPSLPVAELGGH A VN +AWAPHSSCH+CT GDD+QALIWDLS VP+P++DPILAYSAEAE+N LQWAAS  +W+ I F NK+Q+LRV
Sbjct:    7 PPRRKEIYTYEAPWTVFASAWSQRLEPQYAFRLAIGSFLEEYSNKVQVIQRMEDSQH-------------------------FSLIGEVDHSYPPTKIMFSPQASGVSRDLMATTGDYLRLWKIDSS-----NPLNPVTMEALLNNTKNSEYCSPLTSFDWNEVDPSILGTSSIDTTCTIWDLAAEQARTQLIAHDKAVYDIAWARGGRDVFASVGGDGSVRMFDLRSLEHSTIIYETADLTPLLRLAWNKQDPNYLAAILTDSSMTVIVDIRVPSLPVAELGGHEAPVNTMAWAPHSSCHICTGGDDSQALIWDLSGVPQPIEDPILAYSAEAEVNNLQWAASQPDWVSICFNNKLQLLRV 338          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A7S1FP62_9STRA (Hypothetical protein (Fragment) n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FP62_9STRA)

HSP 1 Score: 457 bits (1177), Expect = 2.180e-158
Identity = 222/358 (62.01%), Postives = 270/358 (75.42%), Query Frame = 1
Query:   13 RKEIYTYEAPWTVFSMGWSQR-QDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPKPVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILR 1083
            RKEIYTY+APWT+F+M WSQR QD  + FRLA GSY E Y+N VQ+ +   G                         +  F    +F+HPYP TKI+WSPD+S G RD++AT+GDYLR+W++   G   G+  +  K EA LNNNK+SEYC+PLTSFDW + DPT+VGTSS DTTCTIWD+ TG  KTQLIAHDKEV+D+AF++ K+VFASVGADGSVRMFDLR LEHSTIIYE+  L PLLRL WNKQD NYL+  + DS KT+ILDIRVPSLPVAELGGH   VNA+AWAPHSSCH+C+ GDDAQALIWDLS +PKPV+DPILAY+A+ EIN LQW+A+  +W+ IAF +K+QI +
Sbjct:   10 RKEIYTYQAPWTIFAMSWSQRRQDSNTQFRLAAGSYVEQYSNSVQIIKRTYG---------------------TDSHEGRFYKACEFEHPYPCTKILWSPDQSTGGRDIVATSGDYLRVWNLTDDGHQRGT--LIPKKEALLNNNKNSEYCAPLTSFDWNETDPTIVGTSSIDTTCTIWDIQTGAAKTQLIAHDKEVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPQLDPLLRLCWNKQDPNYLSTFMVDSYKTIILDIRVPSLPVAELGGHSGCVNAIAWAPHSSCHICSTGDDAQALIWDLSPMPKPVEDPILAYNADQEINSLQWSAAQPDWVSIAFADKLQICK 344          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A7S4AUR3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A7S4AUR3_9STRA)

HSP 1 Score: 452 bits (1164), Expect = 3.860e-156
Identity = 227/358 (63.41%), Postives = 271/358 (75.70%), Query Frame = 1
Query:    7 SRRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPK-PVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQI 1077
            S+RKEIYTY+APW +F++ WS+R D  S FRLA+GSY E Y+N V +                +P    +G         S    A+FDHPYP TKIMWSPD   GA+DLLATTGDYLR+W+V   GSG G   ++VK E  LNNNKSSEYC+PLTSFDW + DP++VGTSS DTTCTIWDV T   +TQLIAHD+EV+DLAF++ K+VFASVGADGSVRMFDLR L +STIIYE+ DL PLLRL WNKQD NY+A  + DS +TVILDIRVPSLPV ELGGH   VNA+AWAPHSSCH+CTAGDD+QALIWDLS +PK PVDDPILAY+A+ EIN LQW+AS  +W+ IAF +++QI
Sbjct:   16 SQRKEIYTYKAPWQIFALSWSRRPDPSSQFRLAVGSYLEQYSNVVSI-------------IKKNPAKDDNG---------SLYQAAEFDHPYPCTKIMWSPDTRHGAKDLLATTGDYLRIWNVKDDGSGRGGT-LDVKKEGLLNNNKSSEYCAPLTSFDWNETDPSIVGTSSIDTTCTIWDVNTQQARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMVDSRRTVILDIRVPSLPVTELGGHLGCVNALAWAPHSSCHICTAGDDSQALIWDLSAMPKRPVDDPILAYNADGEINNLQWSASQPDWVSIAFNDQLQI 350          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A7S1D2R6_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D2R6_CYCTE)

HSP 1 Score: 451 bits (1159), Expect = 8.610e-156
Identity = 226/360 (62.78%), Postives = 273/360 (75.83%), Query Frame = 1
Query:   13 RKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPD-KSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPK-PVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            RKEIYTY++PWTVF+M WS R D  S FRLA+GSY E Y+N VQ+ +   G  +              G Q+            +FDHPYP TKI+WSPD ++   +DLLATTGDYLR+W+V   G+G G+  +  K EA LNNNK+SEYC+PLTSFDW + DP +VGTSS DTTCTIWD+ T   +TQLIAHD+EV+DLAF++ K+VFASVGADGSVRMFDLR LEHSTIIYE+ +L PLLRL WNKQD NYLA  + DS +T+ILDIRVPSLPVAELGGH   VNA AWAPHSSCH+CTAGDD+QALIWDLS +PK PV+DPILAY+A+ EIN LQW+AS  +W+ IA+ +K+QILRV
Sbjct:   23 RKEIYTYKSPWTVFAMAWSHRPDPTSQFRLAIGSYVEQYSNAVQIVKKLPGGEN-------------FGNQLY--------AACEFDHPYPCTKILWSPDARNMSGKDLLATTGDYLRVWNVLDDGTGRGT--LTPKKEALLNNNKTSEYCAPLTSFDWNESDPNLVGTSSIDTTCTIWDLTTQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLEHSTIIYESPNLDPLLRLEWNKQDPNYLATFMLDSRRTIILDIRVPSLPVAELGGHLGCVNATAWAPHSSCHICTAGDDSQALIWDLSQMPKRPVEDPILAYNADGEINNLQWSASQPDWVSIAYNDKLQILRV 359          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A7S1UZE1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZE1_9STRA)

HSP 1 Score: 450 bits (1158), Expect = 2.070e-155
Identity = 228/368 (61.96%), Postives = 277/368 (75.27%), Query Frame = 1
Query:    7 SRRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNC----LAQFDHPYPPTKIMWSP---DKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPK-PVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            S RKEIYTY+APWTVFSM WS R D  S FRLA+GSY E Y+N VQV +   G        S DP  +   T     SD   +       +FDHPYP TK++WSP    +S G++DLLATTGDYLR+W+V    SG G+  ++ + EA LNNNK+SEYC+PLTSFDWC  DP ++GTSS DTTCTIWD+ T   +TQLIAHDKEV+D+AF++ K+VFASVGADGSVRMFDLR LEHSTII+E+ +L PLLRL WN QD NYLA    +S +T+ILDIRVPSLPVAELGGH   VNAVAWAPHSSCH+CTAGDD+QALIWDLS + K PVD+PILAY+A+ EIN LQW+AS  +W+ I++ +++QILRV
Sbjct:   17 SSRKEIYTYKAPWTVFSMAWSHRPDPSSQFRLAIGSYIEQYSNAVQVVKKRGGSS------SGDP--TTKPTADSHNSDADLDAQLYEACEFDHPYPCTKVLWSPPNNSQSQGSKDLLATTGDYLRIWNVADDESGRGT--LQPRKEALLNNNKTSEYCAPLTSFDWCLADPNLIGTSSIDTTCTIWDITTQTARTQLIAHDKEVFDIAFARGKDVFASVGADGSVRMFDLRSLEHSTIIFESPNLDPLLRLEWNFQDPNYLATFSFESRRTIILDIRVPSLPVAELGGHVGCVNAVAWAPHSSCHICTAGDDSQALIWDLSQMHKRPVDEPILAYNADGEINNLQWSASQPDWVSISYTDRLQILRV 374          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A7R9ZSW0_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSW0_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 3.480e-155
Identity = 229/361 (63.43%), Postives = 269/361 (74.52%), Query Frame = 1
Query:   10 RRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQV-PRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPK-PVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILRV 1086
            +RKEIYTY+APWTVFSM WS+RQD  S FRLA+GSY E Y+N V +  +N++ +                     Q S Y     A+FDHPYP TK+MWSPD   GA DLLATTGDYLR+WSV    +  G+    VK +A LNNNK+SEYC+PLTSFDW D DP ++GTSS DTTCTIWD+ T   +TQLIAHD+EV+DLAF++ K+VFASVGADGSVRMFDLR L H TIIYE+ DL PLLRL WNKQD NYLA    +S +T ILDIRVPS+PVAEL GH   VNA AWAPHS CH+CTAGDD+QALIWDL+ +PK  VDDPILAYSA+ EIN LQW+AS  +W+ IAFR+KMQILRV
Sbjct:   14 QRKEIYTYQAPWTVFSMAWSRRQDPSSQFRLAIGSYVEQYSNAVAIIKKNSSSDD--------------------QGSLYK---AAEFDHPYPCTKLMWSPDVRIGAPDLLATTGDYLRVWSVHDDDASRGTC--TVKKQALLNNNKTSEYCAPLTSFDWNDADPNMIGTSSIDTTCTIWDLTTQTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLAHCTIIYESPDLEPLLRLEWNKQDPNYLATFSAESRRTTILDIRVPSVPVAELSGHLGTVNATAWAPHSPCHICTAGDDSQALIWDLAAMPKRSVDDPILAYSADGEINNLQWSASQPDWVSIAFRDKMQILRV 349          
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Match: A0A1E7FVX7_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVX7_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 6.340e-155
Identity = 226/360 (62.78%), Postives = 272/360 (75.56%), Query Frame = 1
Query:    7 SRRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVPRNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIMWSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKSSEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEVYDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWNKQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSCHVCTAGDDAQALIWDLSTVPK-PVDDPILAYSAEAEINQLQWAASHSEWIGIAFRNKMQILR 1083
            S+RKEIYTY+APW ++S+ WS+R D  S FRLA+GSY E Y+N V + +  +           D   S     + Q         A+FDHPYP TKIMWSPD   G++DLLATTGDYLR+W+V   GSG       VK EA LNNNK+SEYC+PLTSFDW + DP+++GTSS DTT TIWDV T   +TQLIAHD+EV+DLAF++ K+VFASVGADGSVRMFDLR L +STIIYE+ DL PLLRL WNKQD NY+A  + DS KT+ILDIRVPSLPVAELGGH  +VNA AWAPHSSCH+CTAGDD+QALIWDLST+PK PVDDPILAY+A+ EIN LQW+AS  +W+ IAF +K+QI +
Sbjct:    9 SQRKEIYTYKAPWPIYSLSWSRRPDPTSQFRLAIGSYLEQYSNVVSIIKKNSAS---------DDLGS-----LYQA--------AEFDHPYPCTKIMWSPDTRHGSQDLLATTGDYLRIWNVSDDGSG------TVKKEALLNNNKTSEYCAPLTSFDWNETDPSIIGTSSIDTTVTIWDVNTSTARTQLIAHDREVFDLAFARGKDVFASVGADGSVRMFDLRSLVNSTIIYESPDLEPLLRLEWNKQDPNYMATFMGDSKKTIILDIRVPSLPVAELGGHWGSVNATAWAPHSSCHICTAGDDSQALIWDLSTMPKRPVDDPILAYNADGEINNLQWSASQPDWVSIAFDDKLQICK 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6639.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWX9_9PHAE1.330e-17367.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7G4D5_PHATC1.120e-16264.90Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A6V1NZ18_HETAK1.220e-15960.56Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y0K5_9STRA7.530e-15962.98Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1FP62_9STRA2.180e-15862.01Hypothetical protein (Fragment) n=2 Tax=Corethron ... [more]
A0A7S4AUR3_9STRA3.860e-15663.41Hypothetical protein (Fragment) n=2 Tax=Pseudo-nit... [more]
A0A7S1D2R6_CYCTE8.610e-15662.78Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1UZE1_9STRA2.070e-15561.96Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7R9ZSW0_9STRA3.480e-15563.43Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1E7FVX7_9STRA6.340e-15562.78Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6639contigP-wetherbeei_contig6639:190..1382 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr21794
PFAMsWD40
Model size1089
Max annot lvl2836|Bacillariophyta
KEGG koko:K11805
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.83e-163
EggNOG OGsKOG0290@1|root,KOG0290@2759|Eukaryota,2XAAF@2836|Bacillariophyta
DescriptionWD domain, G-beta repeat
Cds size1089
COG categoryS
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186926.8857386-CDS-P-wetherbeei_contig6639:189..3381683186926.8857386-CDS-P-wetherbeei_contig6639:189..338Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6639 190..338 +
1683186926.8963213-CDS-P-wetherbeei_contig6639:442..13821683186926.8963213-CDS-P-wetherbeei_contig6639:442..1382Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6639 443..1382 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6639.2.1prot_P-wetherbeei_contig6639.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6639 190..1382 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6639.2.1

>prot_P-wetherbeei_contig6639.2.1 ID=prot_P-wetherbeei_contig6639.2.1|Name=mRNA_P-wetherbeei_contig6639.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=363bp
MPSRRKEIYTYEAPWTVFSMGWSQRQDERSMFRLALGSYKESYNNQVQVP
RNANGEHHPPLPFSVDPFFSFSGTQIVQRSDYSFNCLAQFDHPYPPTKIM
WSPDKSPGARDLLATTGDYLRLWSVGAPGSGGGSAGVEVKIEATLNNNKS
SEYCSPLTSFDWCDVDPTVVGTSSTDTTCTIWDVATGVPKTQLIAHDKEV
YDLAFSQTKEVFASVGADGSVRMFDLRQLEHSTIIYETADLAPLLRLAWN
KQDANYLAALLTDSAKTVILDIRVPSLPVAELGGHGAAVNAVAWAPHSSC
HVCTAGDDAQALIWDLSTVPKPVDDPILAYSAEAEINQLQWAASHSEWIG
IAFRNKMQILRV*
back to top

mRNA from alignment at P-wetherbeei_contig6639:190..1382+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6639.2.1 ID=mRNA_P-wetherbeei_contig6639.2.1|Name=mRNA_P-wetherbeei_contig6639.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1193bp|location=Sequence derived from alignment at P-wetherbeei_contig6639:190..1382+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTCGCGCAGAAAAGAAATCTACACCTACGAGGCGCCATGGACAGT GTTTAGTATGGGGTGGAGCCAAAGACAAGACGAGAGGAGCATGTTCAGGC TAGCGCTCGGGAGCTACAAGGAGTCCTATAACAACCAAGTGCAGGTGCCG TTTACTGCCGAGTTCGCTGCTTTGAAAAAAATGAACTTTTGAAAGCCGCG AGATGGCAAGAAGATTTAAACCGTATGGTTCTGAAAGTTGCCGCGCGCTC CAGCCGCAACGCGAACGGTGAACACCATCCCCCTTTGCCCTTTTCCGTCG ACCCTTTTTTCTCCTTCTCTGGCACGCAGATAGTGCAACGCTCAGACTAC TCGTTCAACTGCCTAGCGCAGTTCGACCACCCGTACCCGCCGACCAAGAT TATGTGGTCGCCGGACAAGTCCCCCGGCGCCCGCGACCTCCTAGCAACGA CGGGCGACTACCTGCGGCTGTGGAGCGTCGGCGCGCCGGGCAGCGGCGGC GGCAGTGCAGGAGTCGAGGTCAAGATAGAGGCGACGCTCAACAACAACAA GAGCAGCGAGTACTGCTCGCCGCTGACGTCCTTCGACTGGTGCGACGTTG ACCCGACCGTTGTCGGCACCTCAAGCACCGACACGACATGCACCATCTGG GATGTCGCGACGGGCGTGCCCAAGACGCAGCTCATCGCGCACGACAAGGA GGTCTACGACCTGGCTTTTTCGCAGACGAAGGAAGTCTTCGCGAGCGTTG GCGCCGACGGCTCGGTGCGCATGTTTGACCTGCGGCAGCTGGAGCACTCG ACTATCATCTACGAGACGGCGGACCTGGCGCCGCTGCTGCGGCTCGCCTG GAACAAGCAAGACGCCAATTACCTGGCGGCGTTACTGACTGACTCGGCCA AGACGGTCATCCTCGACATTCGAGTGCCCTCACTGCCAGTCGCCGAGCTC GGCGGCCACGGCGCCGCCGTCAACGCCGTCGCCTGGGCGCCGCACTCCTC CTGCCACGTCTGCACCGCCGGCGACGACGCCCAGGCGCTCATCTGGGACC TGAGCACGGTGCCGAAGCCAGTTGACGATCCGATCCTGGCATACTCGGCC GAGGCGGAGATCAACCAGCTGCAGTGGGCGGCGTCCCACTCGGAGTGGAT CGGTATCGCCTTTCGCAACAAGATGCAGATCCTGCGGGTATGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6639:190..1382+

>mRNA_P-wetherbeei_contig6639.2.1 ID=mRNA_P-wetherbeei_contig6639.2.1|Name=mRNA_P-wetherbeei_contig6639.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1089bp|location=Sequence derived from alignment at P-wetherbeei_contig6639:190..1382+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGTCGCGCAGAAAAGAAATCTACACCTACGAGGCGCCATGGACAGT
GTTTAGTATGGGGTGGAGCCAAAGACAAGACGAGAGGAGCATGTTCAGGC
TAGCGCTCGGGAGCTACAAGGAGTCCTATAACAACCAAGTGCAGGTGCCC
CGCAACGCGAACGGTGAACACCATCCCCCTTTGCCCTTTTCCGTCGACCC
TTTTTTCTCCTTCTCTGGCACGCAGATAGTGCAACGCTCAGACTACTCGT
TCAACTGCCTAGCGCAGTTCGACCACCCGTACCCGCCGACCAAGATTATG
TGGTCGCCGGACAAGTCCCCCGGCGCCCGCGACCTCCTAGCAACGACGGG
CGACTACCTGCGGCTGTGGAGCGTCGGCGCGCCGGGCAGCGGCGGCGGCA
GTGCAGGAGTCGAGGTCAAGATAGAGGCGACGCTCAACAACAACAAGAGC
AGCGAGTACTGCTCGCCGCTGACGTCCTTCGACTGGTGCGACGTTGACCC
GACCGTTGTCGGCACCTCAAGCACCGACACGACATGCACCATCTGGGATG
TCGCGACGGGCGTGCCCAAGACGCAGCTCATCGCGCACGACAAGGAGGTC
TACGACCTGGCTTTTTCGCAGACGAAGGAAGTCTTCGCGAGCGTTGGCGC
CGACGGCTCGGTGCGCATGTTTGACCTGCGGCAGCTGGAGCACTCGACTA
TCATCTACGAGACGGCGGACCTGGCGCCGCTGCTGCGGCTCGCCTGGAAC
AAGCAAGACGCCAATTACCTGGCGGCGTTACTGACTGACTCGGCCAAGAC
GGTCATCCTCGACATTCGAGTGCCCTCACTGCCAGTCGCCGAGCTCGGCG
GCCACGGCGCCGCCGTCAACGCCGTCGCCTGGGCGCCGCACTCCTCCTGC
CACGTCTGCACCGCCGGCGACGACGCCCAGGCGCTCATCTGGGACCTGAG
CACGGTGCCGAAGCCAGTTGACGATCCGATCCTGGCATACTCGGCCGAGG
CGGAGATCAACCAGCTGCAGTGGGCGGCGTCCCACTCGGAGTGGATCGGT
ATCGCCTTTCGCAACAAGATGCAGATCCTGCGGGTATGA
back to top