prot_P-wetherbeei_contig6626.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6626.1.1
Unique Nameprot_P-wetherbeei_contig6626.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length466
Homology
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BLAST of mRNA_P-wetherbeei_contig6626.1.1 vs. uniprot
Match: A0A2P6PZR2_ROSCH (Putative transcription factor interactor and regulator CCHC(Zn) family n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6PZR2_ROSCH)

HSP 1 Score: 56.6 bits (135), Expect = 2.080e-5
Identity = 50/181 (27.62%), Postives = 80/181 (44.20%), Query Frame = 0 
Query:  278 CRRCNVYGHGMMYCPAGPPKRLNDKNTTFGYSDPTVLVVSYALSAFSEIPLSGGGNASWVVDSGAQAHVTSSASGLSNVRPYRGLVRGIGGGTAAIIALGDLHGTVRNSVGARVHFSLKDVRIAPSAGFSLLSAHRLAAHNGIF-----------ELGDGRTGAARGLLRYPARNQTFPLR 447
            C+ CN  GH  + C        N  N +F    PT  + + A S  S        +++W++DSGA AH+TS+ S L   + Y+G     G GT   +++  +  +  N+      F+L ++   PSA  +LLS ++    N  +           +L  GRT     L R  + N  +PLR
Sbjct:   78 CQICNRMGHSALDC-------YNRLNLSFEGRVPTKKLSAMAASTSSP------SSSTWLLDSGANAHITSNLSNLQTSKEYQGSDHINGIGTTTGLSISHIGSSTLNTDSHS--FALNNILYCPSASTNLLSIYKFTNDNNCYLLIYPTHFLVKDLTSGRT-----LFRGRSNNGLYPLR 238
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6626.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2P6PZR2_ROSCH2.080e-527.62Putative transcription factor interactor and regul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6626contigP-wetherbeei_contig6626:8..1405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6626.1.1mRNA_P-wetherbeei_contig6626.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6626 8..1406 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6626.1.1 ID=prot_P-wetherbeei_contig6626.1.1|Name=mRNA_P-wetherbeei_contig6626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=466bp
ELQQVALPSDLGAAATADEKAERAAAVKSANERNELCREAERQAAFWLVQ
CIETNDEALSVWDGLTDSEQKSGSVIWAKLKAHFTEQSGAATVKALKRFT
EFALPAEDVPPIVIRASFNTIRRQMISLGCRQNDATELSTLLSALSQSNR
WQSFARRCVETRLTTTDAVFDAMKEAWTPPEPLHALPAYSAASGGGGGGG
GGDCGDSGNGGGSGRGSRGGFHEGRRDHTHPAFSAAAYSGGGRGGGSGRG
RSRRGPRWGPGTPYQTAEEYWDSPDAYCRRCNVYGHGMMYCPAGPPKRLN
DKNTTFGYSDPTVLVVSYALSAFSEIPLSGGGNASWVVDSGAQAHVTSSA
SGLSNVRPYRGLVRGIGGGTAAIIALGDLHGTVRNSVGARVHFSLKDVRI
APSAGFSLLSAHRLAAHNGIFELGDGRTGAARGLLRYPARNQTFPLRRLN
DSVHVLDISLEIPGLH
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