mRNA_P-wetherbeei_contig6614.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6614.2.1
Unique NamemRNA_P-wetherbeei_contig6614.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6614.2.1 vs. uniprot
Match: A0A2E3RZA8_9PROT (Methyltransf_12 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3RZA8_9PROT)

HSP 1 Score: 132 bits (332), Expect = 9.900e-35
Identity = 70/173 (40.46%), Postives = 101/173 (58.38%), Query Frame = 1 
Query:    4 ESGADDVEVLKSFGMTPSSTLHEFGCGQLRSALHFAEYLEPGHFSANDSSKGRIDLGLDLFGAR-LDRRKPTLIVNPDNSFDWLGGRTFDYIWCHAVFGHMPAADIEDTIGNVRKAMHPGSVFFF--THDEPRLQIPDARDKIVRVDARNWLQSFAYFAGLAEKYGMTIEDVS 513
            ++GA+D+EV+K FG+   ++L+EFG G  RSA HF  +L+  H+  ND S  RI    + F    L ++ PT  V  +NSFDW  G+TFD+IW  AVF HMP  D+ +   NV K MHP S+F    TH        D  D+I R +A++W +  +++   A + G+  EDVS
Sbjct:   97 KTGAEDLEVVKRFGLQADNSLYEFGTGFGRSAQHFVNFLDTDHYFGNDISAARIRQMREFFEFNXLAKKNPTFFVTANNSFDWAEGKTFDFIWTMAVFCHMPDEDVREVFRNVHKIMHPSSIFLALDTH-------LDDSDRIHRYNAKDWFRPPSWYCDAAAEAGLHSEDVS 262
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BLAST of mRNA_P-wetherbeei_contig6614.2.1 vs. uniprot
Match: A0A2E4NI70_9PROT (Methyltransf_12 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4NI70_9PROT)

HSP 1 Score: 117 bits (293), Expect = 4.090e-29
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 1 
Query:    4 ESGADDVEVLKSFGMTPSSTLHEFGCGQLRSALHFAEYLEPGHFSANDSSKGRIDLGLDLFGA-RLDRRKPTLIVNPDNSFDWLGGRTFDYIWCHAVFGHMPAADIEDTIGNVRKAMHPGSVFFF--THDEPRLQIPDARDKIVRVDARNWLQSFAYFAGLAEKYGMTIEDVS 513
            ++G +D+EV K FG+ P  +L EFG G  RSA HF  YL+   +  ND SKGR+    + F    L  ++P ++V  DN+FDWL GR FDY+W  AV  HMP  D+     N RK MH  S      TH E         + + R +A++W +   ++    E  G+  ++ +
Sbjct:   79 KTGREDLEVAKRFGLKPEHSLFEFGTGFGRSAQHFISYLKKKQYCGNDISKGRVRQMTEYFELIGLSNKEPEILVTADNTFDWLNGRKFDYVWTMAVLSHMPDEDVVAFFKNARKIMHENSTLLALDTHIE-------GYNDVFRYNAKDWFRPPEWYCDAIESVGLVAQNAT 244
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6614.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2E3RZA8_9PROT9.900e-3540.46Methyltransf_12 domain-containing protein n=1 Tax=... [more]
A0A2E4NI70_9PROT4.090e-2935.84Methyltransf_12 domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6614contigP-wetherbeei_contig6614:968..1480 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1123321.KB905815_gene3043
PFAMsMethyltransf_12
Model size513
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.15e-16
EggNOG OGsCOG4976@1|root,COG4976@2|Bacteria,2I41M@201174|Actinobacteria
DescriptionMethyltransferase domain
Cds size513
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186925.6464117-CDS-P-wetherbeei_contig6614:967..14801683186925.6464117-CDS-P-wetherbeei_contig6614:967..1480Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6614 968..1480 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6614.2.1prot_P-wetherbeei_contig6614.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6614 968..1480 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6614.2.1

>prot_P-wetherbeei_contig6614.2.1 ID=prot_P-wetherbeei_contig6614.2.1|Name=mRNA_P-wetherbeei_contig6614.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp
EESGADDVEVLKSFGMTPSSTLHEFGCGQLRSALHFAEYLEPGHFSANDS
SKGRIDLGLDLFGARLDRRKPTLIVNPDNSFDWLGGRTFDYIWCHAVFGH
MPAADIEDTIGNVRKAMHPGSVFFFTHDEPRLQIPDARDKIVRVDARNWL
QSFAYFAGLAEKYGMTIEDVS
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mRNA from alignment at P-wetherbeei_contig6614:968..1480-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6614.2.1 ID=mRNA_P-wetherbeei_contig6614.2.1|Name=mRNA_P-wetherbeei_contig6614.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig6614:968..1480- (Phaeothamnion wetherbeei SAG_119_79)
GAAGAAAGCGGCGCGGATGACGTCGAAGTGCTCAAGAGTTTCGGTATGAC
GCCGTCTTCGACGCTGCACGAATTCGGTTGCGGACAATTGCGCAGCGCCC
TGCATTTCGCCGAGTATCTTGAGCCGGGCCACTTCTCGGCCAACGATTCC
AGCAAAGGACGCATCGATCTCGGGCTCGACCTGTTCGGCGCGCGGCTCGA
TCGGCGCAAGCCCACTCTGATCGTCAATCCCGACAACAGCTTCGACTGGC
TCGGCGGCCGGACGTTCGATTACATCTGGTGCCATGCCGTGTTCGGGCAC
ATGCCGGCTGCGGACATCGAAGACACCATCGGCAACGTTCGCAAGGCGAT
GCATCCGGGATCGGTGTTTTTCTTCACGCACGACGAACCGCGCCTGCAGA
TTCCCGACGCGCGCGACAAGATCGTGCGCGTCGATGCGCGTAACTGGCTG
CAATCCTTCGCCTATTTCGCGGGCTTGGCCGAAAAATACGGCATGACGAT
CGAGGATGTCAGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6614:968..1480-

>mRNA_P-wetherbeei_contig6614.2.1 ID=mRNA_P-wetherbeei_contig6614.2.1|Name=mRNA_P-wetherbeei_contig6614.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig6614:968..1480- (Phaeothamnion wetherbeei SAG_119_79)
GAAGAAAGCGGCGCGGATGACGTCGAAGTGCTCAAGAGTTTCGGTATGAC
GCCGTCTTCGACGCTGCACGAATTCGGTTGCGGACAATTGCGCAGCGCCC
TGCATTTCGCCGAGTATCTTGAGCCGGGCCACTTCTCGGCCAACGATTCC
AGCAAAGGACGCATCGATCTCGGGCTCGACCTGTTCGGCGCGCGGCTCGA
TCGGCGCAAGCCCACTCTGATCGTCAATCCCGACAACAGCTTCGACTGGC
TCGGCGGCCGGACGTTCGATTACATCTGGTGCCATGCCGTGTTCGGGCAC
ATGCCGGCTGCGGACATCGAAGACACCATCGGCAACGTTCGCAAGGCGAT
GCATCCGGGATCGGTGTTTTTCTTCACGCACGACGAACCGCGCCTGCAGA
TTCCCGACGCGCGCGACAAGATCGTGCGCGTCGATGCGCGTAACTGGCTG
CAATCCTTCGCCTATTTCGCGGGCTTGGCCGAAAAATACGGCATGACGAT
CGAGGATGTCAGC
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