prot_P-wetherbeei_contig6611.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6611.3.1
Unique Name	prot_P-wetherbeei_contig6611.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	130

Homology

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BLAST of mRNA_P-wetherbeei_contig6611.3.1 vs. uniprot
Match: A0A835Z9P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.220e-26
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 0

Query:    5 VYESDLGPGEIFGESVLEGLSARRRTVIAVTRVELLAIDAADYEKIRDRGHSHVPIERKLSFLKKVPLIKHMESYRRHQMAMLLRASEIPKGKVIVSPGEISKCLYFIVSGTAEV 119
            VY SDL PG++ G+ VL+G+  R  T +AV+R  LL++D  DY ++RD G S + ++ K  FLK+VPL+K ME YR +++A+L R  E PK   IV  GE S+ L+FI SGTAEV
Sbjct:  928 VYHSDLCPGDVLGDGVLDGVRTRHHTAVAVSRATLLSVDVEDYLRVRDHGVSLLSVDDKFHFLKQVPLLKGMEMYRIYRIALLARLEEYPKDTWIVRSGEASRGLFFIYSGTAEV 1042

[Close]

BLAST of mRNA_P-wetherbeei_contig6611.3.1 vs. uniprot
Match: A0A7S0XBA2_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0XBA2_9CHLO)

HSP 1 Score: 52.0 bits (123), Expect = 1.350e-5
Identity = 32/119 (26.89%), Postives = 60/119 (50.42%), Query Frame = 0

Query:    8 SDLGPGEIFGESVLEGLSARRRTVIAVTRVELLAIDAADYEKIRDRGHSHVPIERKLSFLKKVPLIKHMESYRRHQMAMLLRASEIPKGKVIVSPGEISKCLYFIVSGTAEVQSRVLAA 126
            ++L P   FGE  L     R  T++A   + L ++    Y +I   G     ++ KL F++KVP+++ M+S+    +++  +   +P+G  I + GE S  +Y +  G   V + + AA
Sbjct:   22 AELEPRHGFGEMSLFKNEPRSATIVASEHLWLASVTKESYLRIIAGGMVKA-LQEKLDFMRKVPVLRDMDSFALRNLSLCFQHVRVPRGSQIYTQGEDSDSVYVVYKGQCCVTTAITAA 139

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6611.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6611.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835Z9P8_9STRA	1.220e-26	49.57	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S0XBA2_9CHLO	1.350e-5	26.89	Hypothetical protein n=1 Tax=Mantoniella antarctic...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 3..54 e-value: 3.0E-8 score: 35.2 coord: 55..126 e-value: 2.9E-12 score: 48.3
None	No IPR available	PIRSR	PIRSR000548-1	PIRSR000548-1	coord: 10..121 e-value: 8.3E-15 score: 52.6
IPR043533	Cyclic nucleotide-binding domain-containing protein 1/2	PANTHER	PTHR23011	UNCHARACTERIZED	coord: 10..119
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 10..50 score: 9.6326
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 72..130 score: 10.234
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 9..51
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 58..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6611	contig	P-wetherbeei_contig6611:1930..3006 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6611.3.1	mRNA_P-wetherbeei_contig6611.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6611 1928..3006 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6611.3.1 ID=prot_P-wetherbeei_contig6611.3.1|Name=mRNA_P-wetherbeei_contig6611.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
VSCFVYESDLGPGEIFGESVLEGLSARRRTVIAVTRVELLAIDAADYEKI
RDRGHSHVPIERKLSFLKKVPLIKHMESYRRHQMAMLLRASEIPKGKVIV
SPGEISKCLYFIVSGTAEVQSRVLAAARLL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014710	RmlC-like_jellyroll
IPR043533	CNBD1/2
IPR000595	cNMP-bd_dom
IPR018490	cNMP-bd-like