prot_P-wetherbeei_contig12751.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig12751.2.1
Unique Name	prot_P-wetherbeei_contig12751.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	142

Homology

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A7R9YDS6_9STRA (Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDS6_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.140e-56
Identity = 105/156 (67.31%), Postives = 120/156 (76.92%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESWR 141
            GYVS++E   + AEAE  A+++ RK+ + GALKLP++L+DLTE  PEEI LVPSPATGKPGSLT PRAFNLMFQT VGAM+DASS AYLRPETAQGIF NFK                IGK FRNEITPRNFIFRSREFEQMEVEYFI  +++ WR
Sbjct:  148 GYVSVMEDAAMQAEAEKKAEKM-RKSAQAGALKLPIELKDLTEATPEEIELVPSPATGKPGSLTPPRAFNLMFQTQVGAMSDASSTAYLRPETAQGIFVNFKTTQNVARGKLPFGIAQIGKAFRNEITPRNFIFRSREFEQMEVEYFIPPEDDIWR 302

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A835YRJ7_9STRA (Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ7_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.670e-56
Identity = 102/156 (65.38%), Postives = 120/156 (76.92%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESWR 141
            G VS++E   + AEA+AAAD++KRKA KQGAL  PL L+DLT+   E++ ++PSPATG PG+LTAPR FNLMFQT+VGA  D S+ AYLRPETAQGIFTNFKN               IGK FRNEITPRNFIFRSREFEQMEVEYFI DD+++WR
Sbjct:  113 GAVSVMESGTMEAEAQAAADKMKRKAAKQGAL-APLDLKDLTQATAEDLSIIPSPATGNPGTLTAPRDFNLMFQTAVGATVDGSNAAYLRPETAQGIFTNFKNVQQTARAKIPFGIAQIGKAFRNEITPRNFIFRSREFEQMEVEYFISDDDDAWR 267

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: W7TM99_9STRA (Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM99_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.260e-55
Identity = 98/155 (63.23%), Postives = 118/155 (76.13%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESW 140
            GY++LL+  D+  EA   A++LK+KAGK+G +K PL ++D+T+    E+ L+PSPATG+PGSLT PRAFNLMFQTSVGA+ DASS A+LRPETAQGIFTNFKN               IGK FRNEITPRNFIFRSREFEQME+EYFI  +EE W
Sbjct:  199 GYIALLDSGDLHGEARKLAEKLKKKAGKEGTIKFPLDIKDMTKATVAEMALIPSPATGEPGSLTPPRAFNLMFQTSVGALADASSTAFLRPETAQGIFTNFKNVQSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPEEEVW 353

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: D8LCT3_ECTSI (Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCT3_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 3.520e-55
Identity = 99/150 (66.00%), Postives = 121/150 (80.67%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKNI--------GKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESWRQ 142
            GYVS+LE   +  EA+ AA+++KRKA KQG LK  + L+DL+ ++ EE+ LVPSPATG PG+LT PR FNLMFQT+VGAM DASSVAY+RPETAQGIFTNFKN+        GK FRNEITPRNFIFRSREFEQMEVEYF+++ + +W+Q
Sbjct:  226 GYVSVLESGTMQEEADTAANKIKRKAAKQGTLKA-VSLQDLSRISAEELELVPSPATGTPGALTPPREFNLMFQTNVGAMADASSVAYMRPETAQGIFTNFKNVQQSARAKVGKAFRNEITPRNFIFRSREFEQMEVEYFVEEGD-AWKQ 373

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A257QHU4_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacterium 21-51-4 TaxID=1970609 RepID=A0A257QHU4_9BACT)

HSP 1 Score: 186 bits (471), Expect = 7.730e-54
Identity = 100/155 (64.52%), Postives = 116/155 (74.84%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESW 140
            GY+SLLE  D+  +A+ AA+ +KRKA KQG L+  ++LR  TE  PEE   +PSPATGKPGSLT PR+FNLMF T VGA+ DASSVAYLRPETAQGIF NFKN               IGK FRNEITPRNFIFRSREFEQME+EYFI+ D+E+W
Sbjct:  127 GYISLLESGDMEEQAQKAAELMKRKAAKQGTLEA-VKLRPYTEAKPEEYSQIPSPATGKPGSLTPPRSFNLMFSTHVGALEDASSVAYLRPETAQGIFANFKNVTDSTRVKIPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFINPDDETW 280

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A7S0P4G7_9EUKA (Glycine--tRNA ligase (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P4G7_9EUKA)

HSP 1 Score: 184 bits (468), Expect = 1.700e-53
Identity = 102/157 (64.97%), Postives = 117/157 (74.52%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESWRQ 142
            GYVSLLE  D+  +A A A ++KRKA  QG+L L  +L+D TE  P+E  LVPSP TGKPG+LTAPR FNLMFQT+VGAM DA+SVAYLRPETAQGIFTNF+N               IGK FRNEITPRNFIFRSREFEQME+E+FI  DE+ W Q
Sbjct:  137 GYVSLLESGDMEEKAMAMAQKMKRKAKLQGSLTLS-ELKDFTEATPDEQALVPSPETGKPGALTAPRDFNLMFQTNVGAMADAASVAYLRPETAQGIFTNFRNVVSTGRVKVPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEFFIPPDEDVWAQ 292

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A6U1N9R4_9STRA (Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1N9R4_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.220e-53
Identity = 97/157 (61.78%), Postives = 118/157 (75.16%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESWRQ 142
            GY+SLLE  D+  +AE  A ++K+KA KQG LK P++L+++ E   EE+ L+PSPATG PG+LTAPR FNLMFQT VGA+ DAS+VAYLRPETAQGIFTNFKN               IGK FRNEITPRNFIFRSREFEQME+EYFI   ++ W++
Sbjct:  113 GYLSLLESGDMQDQAEKQAKKMKKKAEKQGTLK-PIELKEVAEATEEELALIPSPATGTPGALTAPREFNLMFQTQVGALADASAVAYLRPETAQGIFTNFKNVVNTARIKLPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIPPGDDQWQE 268

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A1J4XFE5_9BACT (Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacterium CG1_02_43_26 TaxID=1805421 RepID=A0A1J4XFE5_9BACT)

HSP 1 Score: 182 bits (463), Expect = 1.040e-52
Identity = 100/155 (64.52%), Postives = 114/155 (73.55%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESW 140
            GYVS+LE   +  EA+ AA+ LKRK  KQG+LK  + L+  TE  PEE  LVPSPATGKPGSLTAPR FNLMF+TSVGAM D SS+AYLRPETAQGIF NFKN               IGK FRNEITPRN+IFRSREFEQME+EYFI   +++W
Sbjct:  121 GYVSVLESGTMQEEADKAAEALKRKLAKQGSLKA-VALKPFTEAKPEEYELVPSPATGKPGSLTAPRDFNLMFETSVGAMRDESSIAYLRPETAQGIFANFKNVVDTTRVKVPFGIAQIGKAFRNEITPRNYIFRSREFEQMEIEYFIPPQDDAW 274

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A257LRY4_9BACT (Glycine--tRNA ligase (Fragment) n=1 Tax=Verrucomicrobiales bacterium VVV1 TaxID=2015575 RepID=A0A257LRY4_9BACT)

HSP 1 Score: 174 bits (441), Expect = 1.560e-52
Identity = 95/151 (62.91%), Postives = 109/151 (72.19%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDD 136
            GYVS LE  +   E + AA+  KRK   QG L  P+  +DLTE   +EI L+PSPATG+PGSLT PRAFN+MFQT+VGAMTD SSVAYLRPETAQG+F +FKN               IGK FRNEITPRNFIFRSREFEQME+EYFI +D
Sbjct:    7 GYVSALESENTAGELQVAAESFKRKKAIQGTLS-PVVAKDLTEAREDEIALIPSPATGEPGSLTPPRAFNMMFQTNVGAMTDGSSVAYLRPETAQGMFVDFKNVVDTGRVKLPFGIAQIGKSFRNEITPRNFIFRSREFEQMEMEYFIHED 156

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BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Match: A0A6U2HYH8_HEMAN (Glycine--tRNA ligase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2HYH8_HEMAN)

HSP 1 Score: 183 bits (464), Expect = 3.390e-52
Identity = 100/155 (64.52%), Postives = 115/155 (74.19%), Query Frame = 0

Query:    1 GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIPLVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTNFKN---------------IGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESW 140
            GYVS++E   +  EA+  A+ +KRKA KQG LK P+ L ++ E   +E+  VPSPATGKPGSLT PRAFNLMFQT VGAM+DASS AYLRPETAQGIF NFKN               IGK FRNEITPRNFIFRSREFEQME+EYFIDD +E+W
Sbjct:  210 GYVSVMESGTMQEEADKTANTMKRKAQKQGTLK-PVTLAEVAECPLDELENVPSPATGKPGSLTPPRAFNLMFQTQVGAMSDASSTAYLRPETAQGIFVNFKNVQQTARTTLPFGIAQIGKAFRNEITPRNFIFRSREFEQMEIEYFIDDADETW 363

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig12751.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7R9YDS6_9STRA	1.140e-56	67.31	Glycine--tRNA ligase n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A835YRJ7_9STRA	1.670e-56	65.38	Glycine--tRNA ligase n=1 Tax=Tribonema minus TaxID...	[more]
W7TM99_9STRA	1.260e-55	63.23	Glycine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID...	[more]
D8LCT3_ECTSI	3.520e-55	66.00	Glycine--tRNA ligase n=1 Tax=Ectocarpus siliculosu...	[more]
A0A257QHU4_9BACT	7.730e-54	64.52	Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacte...	[more]
A0A7S0P4G7_9EUKA	1.700e-53	64.97	Glycine--tRNA ligase (Fragment) n=1 Tax=Calcidiscu...	[more]
A0A6U1N9R4_9STRA	3.220e-53	61.78	Glycine--tRNA ligase n=1 Tax=Fibrocapsa japonica T...	[more]
A0A1J4XFE5_9BACT	1.040e-52	64.52	Glycine--tRNA ligase n=1 Tax=Verrucomicrobia bacte...	[more]
A0A257LRY4_9BACT	1.560e-52	62.91	Glycine--tRNA ligase (Fragment) n=1 Tax=Verrucomic...	[more]
A0A6U2HYH8_HEMAN	3.390e-52	64.52	Glycine--tRNA ligase n=2 Tax=Hemiselmis andersenii...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002315	Glycyl-tRNA synthetase	PRINTS	PR01043	TRNASYNTHGLY	coord: 88..105 score: 70.68 coord: 67..79 score: 58.55
IPR045864	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	GENE3D	3.30.930.10	Bira Bifunctional Protein; Domain 2	coord: 8..141 e-value: 7.9E-27 score: 96.2
IPR045864	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 52..140
None	No IPR available	PANTHER	PTHR10745:SF0	GLYCINE--TRNA LIGASE	coord: 52..138
IPR027031	Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2	PANTHER	PTHR10745	GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2	coord: 52..138
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 104..142 score: 8.796093

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig12751	contig	P-wetherbeei_contig12751:443..1663 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig12751.2.1	mRNA_P-wetherbeei_contig12751.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig12751 443..1663 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig12751.2.1 ID=prot_P-wetherbeei_contig12751.2.1|Name=mRNA_P-wetherbeei_contig12751.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp
GYVSLLEGPDIVAEAEAAADRLKRKAGKQGALKLPLQLRDLTELAPEEIP
LVPSPATGKPGSLTAPRAFNLMFQTSVGAMTDASSVAYLRPETAQGIFTN
FKNIGKDFRNEITPRNFIFRSREFEQMEVEYFIDDDEESWRQ

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002315	tRNA-synt_gly
IPR045864	aa-tRNA-synth_II/BPL/LPL
IPR027031	Gly-tRNA_synthase/POLG2
IPR006195	aa-tRNA-synth_II